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Aliases for LINC00597 Gene

Subcategory (RNA class) for LINC00597 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for LINC00597 Gene

  • Long Intergenic Non-Protein Coding RNA 597 2 3
  • C15orf5 3 4
  • Chromosome 15 Open Reading Frame 5 2

External Ids for LINC00597 Gene

ORGUL Members for LINC00597 Gene

Previous HGNC Symbols for LINC00597 Gene

  • C15orf5

Previous GeneCards Identifiers for LINC00597 Gene

  • GC15M077517

Summaries for LINC00597 Gene

GeneCards Summary for LINC00597 Gene

LINC00597 (Long Intergenic Non-Protein Coding RNA 597) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00597 Gene

Genomics for LINC00597 Gene

Genomic Location for LINC00597 Gene

Start:
77,223,893 bp from pter
End:
77,225,404 bp from pter
Size:
1,512 bases
Orientation:
Minus strand

Genomic View for LINC00597 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC00597 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00597 Gene

No data available for Regulatory Elements for LINC00597 Gene

Proteins for LINC00597 Gene

  • Protein details for LINC00597 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H2U6-CO005_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by LINC00597
    Protein Accession:
    Q9H2U6
    Secondary Accessions:
    • Q3SY27
    • Q9UMC1

    Protein attributes for LINC00597 Gene

    Size:
    94 amino acids
    Molecular mass:
    11474 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LINC00597 Gene

Proteomics data for LINC00597 Gene at MOPED

Post-translational modifications for LINC00597 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00597 Gene

Domains for LINC00597 Gene

Gene Families for LINC00597 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for LINC00597 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC00597: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC00597 Gene

Function for LINC00597 Gene

Phenotypes for LINC00597 Gene

GenomeRNAi human phenotypes for LINC00597:
genes like me logo Genes that share phenotypes with LINC00597: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LINC00597 Gene

Localization for LINC00597 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC00597 Gene

Pathways for LINC00597 Gene

SuperPathways for LINC00597 Gene

No Data Available

Interacting Proteins for LINC00597 Gene

Gene Ontology (GO) - Biological Process for LINC00597 Gene

None

No data available for Pathways by source for LINC00597 Gene

Transcripts for LINC00597 Gene

mRNA/cDNA for LINC00597 Gene

Unigene Clusters for LINC00597 Gene

Long intergenic non-protein coding RNA 597:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC00597
    • Block miRNA regulation of LINC00597 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for LINC00597

    Primer Products

    • OriGene qSTAR qPCR primer pairs in human,mouse,rat for LINC00597
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for LINC00597 Gene

    No ASD Table

    Relevant External Links for LINC00597 Gene

    GeneLoc Exon Structure for
    LINC00597
    ECgene alternative splicing isoforms for
    LINC00597

    Expression for LINC00597 Gene

    mRNA expression in normal human tissues for LINC00597 Gene

    SOURCE GeneReport for Unigene cluster for LINC00597 Gene Hs.656938

    mRNA Expression by UniProt/SwissProt for LINC00597 Gene

    Q9H2U6-CO005_HUMAN
    Tissue specificity: Expressed in heart.
    genes like me logo Genes that share expressions with LINC00597: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and Protein expression for LINC00597 Gene

    Orthologs for LINC00597 Gene

    No data available for Orthologs and Evolution for LINC00597 Gene

    Paralogs for LINC00597 Gene

    No data available for Paralogs for LINC00597 Gene

    Variants for LINC00597 Gene

    Relevant External Links for LINC00597 Gene

    HapMap Linkage Disequilibrium report
    LINC00597

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for LINC00597 Gene

    Disorders for LINC00597 Gene

    No disorders were found for LINC00597 Gene.

    No data available for UniProtKB/Swiss-Prot for LINC00597 Gene

    Publications for LINC00597 Gene

    1. Identification of C15orf5, a heart-enriched transcript on chromosome 15q23-q24. (PMID: 11697146) Carim-Todd L. … Escarceller M. (DNA Seq. 2001) 3 4
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
    3. Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody M.C. … Nusbaum C. (Nature 2006) 4
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

    Products for LINC00597 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC00597
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for LINC00597
      • Block miRNA regulation of LINC00597 using miScript Target Protectors

      Sources for LINC00597 Gene

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