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Aliases for LINC00588 Gene

Subcategory (RNA class) for LINC00588 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC00588 Gene

  • Long Intergenic Non-Protein Coding RNA 588 2 3
  • C8orf71 3 4
  • Chromosome 8 Open Reading Frame 71 2

External Ids for LINC00588 Gene

Previous HGNC Symbols for LINC00588 Gene

  • C8orf71

Previous GeneCards Identifiers for LINC00588 Gene

  • GC08P058193

Summaries for LINC00588 Gene

GeneCards Summary for LINC00588 Gene

LINC00588 (Long Intergenic Non-Protein Coding RNA 588) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00588 Gene

Genomics for LINC00588 Gene

Genomic Location for LINC00588 Gene

Chromosome:
8
Start:
57,279,543 bp from pter
End:
57,284,731 bp from pter
Size:
5,189 bases
Orientation:
Plus strand

Genomic View for LINC00588 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC00588 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00588 Gene

No data available for Regulatory Elements for LINC00588 Gene

Proteins for LINC00588 Gene

  • Protein details for LINC00588 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9Y4M8-CH071_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by LINC00588
    Protein Accession:
    Q9Y4M8

    Protein attributes for LINC00588 Gene

    Size:
    146 amino acids
    Molecular mass:
    16018 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LINC00588 Gene

Proteomics data for LINC00588 Gene at MOPED

Post-translational modifications for LINC00588 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00588 Gene

Domains & Families for LINC00588 Gene

Protein Domains for LINC00588 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC00588: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC00588 Gene

Function for LINC00588 Gene

Gene Ontology (GO) - Molecular Function for LINC00588 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with LINC00588: view

Phenotypes for LINC00588 Gene

GenomeRNAi human phenotypes for LINC00588:
genes like me logo Genes that share phenotypes with LINC00588: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00588 Gene

Localization for LINC00588 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC00588 Gene

Pathways & Interactions for LINC00588 Gene

SuperPathways for LINC00588 Gene

No Data Available

Interacting Proteins for LINC00588 Gene

Selected Interacting proteins: Q9Y4M8-CH071_HUMAN for LINC00588 Gene via UniProtKB

Symbol External ID(s) Details
RBPMS

Gene Ontology (GO) - Biological Process for LINC00588 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC00588 Gene

Drugs & Compounds for LINC00588 Gene

No Compound Related Data Available

Transcripts for LINC00588 Gene

mRNA/cDNA for LINC00588 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(10) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LINC00588 Gene

Long intergenic non-protein coding RNA 588:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00588 Gene

No ASD Table

Relevant External Links for LINC00588 Gene

GeneLoc Exon Structure for
LINC00588
ECgene alternative splicing isoforms for
LINC00588

Expression for LINC00588 Gene

mRNA expression in normal human tissues for LINC00588 Gene

mRNA differential expression in normal tissues according to GTEx for LINC00588 Gene

This gene is overexpressed in Testis (x40.0).

SOURCE GeneReport for Unigene cluster for LINC00588 Gene Hs.159352

genes like me logo Genes that share expression patterns with LINC00588: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for LINC00588 Gene

Orthologs for LINC00588 Gene

Evolution for LINC00588 Gene

ENSEMBL:
Gene Tree for LINC00588 (if available)
TreeFam:
Gene Tree for LINC00588 (if available)

No data available for Orthologs for LINC00588 Gene

Paralogs for LINC00588 Gene

No data available for Paralogs for LINC00588 Gene

Variants for LINC00588 Gene

Relevant External Links for LINC00588 Gene

HapMap Linkage Disequilibrium report
LINC00588

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC00588 Gene

Disorders for LINC00588 Gene

Relevant External Links for LINC00588

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LINC00588
genes like me logo Genes that share disorders with LINC00588: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC00588 Gene

Publications for LINC00588 Gene

  1. Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. (PMID: 11230166) Wiemann S. … Poustka A. (Genome Res. 2001) 2 67
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 67
  3. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 67
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 67

Products for LINC00588 Gene

Sources for LINC00588 Gene

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