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Aliases for LINC00269 Gene

Subcategory (RNA class) for LINC00269 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for LINC00269 Gene

  • Long Intergenic Non-Protein Coding RNA 269 2 3
  • NCRNA00269 3 4
  • CXorf62 3 4
  • Chromosome X Open Reading Frame 62 2
  • Non-Protein Coding RNA 269 2

External Ids for LINC00269 Gene

ORGUL Members for LINC00269 Gene

Previous Symbols for LINC00269 Gene

  • CXorf62
  • NCRNA00269

Summaries for LINC00269 Gene

GeneCards Summary for LINC00269 Gene

LINC00269 (Long Intergenic Non-Protein Coding RNA 269) is a RNA Gene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00269 Gene

Genomics for LINC00269 Gene

Genomic Location for LINC00269 Gene

Start:
69,179,557 bp from pter
End:
69,209,924 bp from pter
Size:
30,368 bases
Orientation:
Plus strand

Genomic View for LINC00269 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC00269 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00269 Gene

No data available for Regulatory Elements for LINC00269 Gene

Proteins for LINC00269 Gene

  • Protein details for LINC00269 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N2A0-CX062_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by LINC00269
    Protein Accession:
    Q8N2A0
    Secondary Accessions:

    Protein attributes for LINC00269 Gene

    Size:
    174 amino acids
    Molecular mass:
    18329 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LINC00269 Gene

Proteomics data for LINC00269 Gene at MOPED

Post-translational modifications for LINC00269 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00269 Gene

Domains for LINC00269 Gene

Gene Families for LINC00269 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for LINC00269 Gene

ProtoNet:
genes like me logo Genes that share domains with LINC00269: view

No data available for UniProtKB/Swiss-Prot for LINC00269 Gene

Function for LINC00269 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LINC00269 Gene

Localization for LINC00269 Gene

No data available for Gene Ontology (GO) - Cellular Components for LINC00269 Gene

Pathways for LINC00269 Gene

SuperPathways for LINC00269 Gene

No Data Available

Interacting Proteins for LINC00269 Gene

Gene Ontology (GO) - Biological Process for LINC00269 Gene

None

No data available for Pathways by source for LINC00269 Gene

Transcripts for LINC00269 Gene

mRNA/cDNA for LINC00269 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00269 Gene

No ASD Table

Relevant External Links for LINC00269 Gene

GeneLoc Exon Structure for
LINC00269
ECgene alternative splicing isoforms for
LINC00269

Expression for LINC00269 Gene

mRNA expression in normal human tissues for LINC00269 Gene

mRNA differential expression in normal tissues according to GTEx for LINC00269 Gene

This gene is overexpressed in Pituitary (10.7), Brain - Nucleus accumbens (basal ganglia) (7.5), Brain - Amygdala (5.2), Brain - Anterior cingulate cortex (BA24) (4.7), and Brain - Putamen (basal ganglia) (4.1).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for LINC00269 Gene

genes like me logo Genes that share expressions with LINC00269: view

Orthologs for LINC00269 Gene

Evolution for LINC00269 Gene

ENSEMBL:
Gene Tree for LINC00269 (if available)
TreeFam:
Gene Tree for LINC00269 (if available)

No data available for Orthologs for LINC00269 Gene

Paralogs for LINC00269 Gene

genes like me logo Genes that share paralogs with LINC00269: view

No data available for Paralogs for LINC00269 Gene

Variants for LINC00269 Gene

Sequence variations from dbSNP and Humsavar for LINC00269 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs748865 -- 69,191,147(-) GTCCC(A/C)CACGC intron-variant
rs943166 -- 69,191,602(+) CCTAC(C/T)ATGTT intron-variant
rs1926350 -- 69,196,245(-) GCCTC(A/G)TTGGG intron-variant
rs1926351 -- 69,193,808(-) GGTGG(A/T)TGGGA intron-variant
rs1926352 -- 69,188,615(-) GTGTT(C/T)TCATT intron-variant

Relevant External Links for LINC00269 Gene

HapMap Linkage Disequilibrium report
LINC00269

No data available for Structural Variations from Database of Genomic Variants (DGV) for LINC00269 Gene

Disorders for LINC00269 Gene

No disorders were found for LINC00269 Gene.

No data available for UniProtKB/Swiss-Prot for LINC00269 Gene

Publications for LINC00269 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3

Products for LINC00269 Gene

Sources for LINC00269 Gene

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