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Aliases for LINC-PINT Gene

Subcategory (RNA class) for LINC-PINT Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC-PINT Gene

  • Long Intergenic Non-Protein Coding RNA, P53 Induced Transcript 2 3
  • MKLN1 Antisense RNA 1 (Head To Head) 2 3
  • P53 Induced Noncoding Transcript 2 3
  • LincRNA-Pint 3
  • MKLN1-AS1 3
  • PINT 3

External Ids for LINC-PINT Gene

Previous HGNC Symbols for LINC-PINT Gene

  • MKLN1-AS1

Previous GeneCards Identifiers for LINC-PINT Gene

  • GC07M130632
  • GC07M130941

Summaries for LINC-PINT Gene

GeneCards Summary for LINC-PINT Gene

LINC-PINT (Long Intergenic Non-Protein Coding RNA, P53 Induced Transcript) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC-PINT Gene

Genomics for LINC-PINT Gene

Genomic Location for LINC-PINT Gene

Chromosome:
7
Start:
130,877,562 bp from pter
End:
131,110,176 bp from pter
Size:
232,615 bases
Orientation:
Minus strand

Genomic View for LINC-PINT Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC-PINT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC-PINT Gene

No data available for Regulatory Elements for LINC-PINT Gene

Proteins for LINC-PINT Gene

Post-translational modifications for LINC-PINT Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC-PINT Gene

Domains & Families for LINC-PINT Gene

Gene Families for LINC-PINT Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC-PINT: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC-PINT Gene

Function for LINC-PINT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC-PINT Gene

Localization for LINC-PINT Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for LINC-PINT Gene COMPARTMENTS Subcellular localization image for LINC-PINT gene
Compartment Confidence
cytosol 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for LINC-PINT Gene

Pathways & Interactions for LINC-PINT Gene

SuperPathways for LINC-PINT Gene

No Data Available

Interacting Proteins for LINC-PINT Gene

Gene Ontology (GO) - Biological Process for LINC-PINT Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC-PINT Gene

Drugs & Compounds for LINC-PINT Gene

No Compound Related Data Available

Transcripts for LINC-PINT Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LINC-PINT Gene

No ASD Table

Relevant External Links for LINC-PINT Gene

GeneLoc Exon Structure for
LINC-PINT
ECgene alternative splicing isoforms for
LINC-PINT

Expression for LINC-PINT Gene

mRNA expression in normal human tissues for LINC-PINT Gene

genes like me logo Genes that share expression patterns with LINC-PINT: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for LINC-PINT Gene

Orthologs for LINC-PINT Gene

Evolution for LINC-PINT Gene

ENSEMBL:
Gene Tree for LINC-PINT (if available)
TreeFam:
Gene Tree for LINC-PINT (if available)

No data available for Orthologs for LINC-PINT Gene

Paralogs for LINC-PINT Gene

No data available for Paralogs for LINC-PINT Gene

Variants for LINC-PINT Gene

Sequence variations from dbSNP and Humsavar for LINC-PINT Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs19114 -- 130,904,765(-) AATAA(A/G)TAACC intron-variant
rs125124 -- 130,899,925(+) ACCCC(C/G)ACTCC intron-variant
rs157909 -- 130,882,086(+) TACTA(A/G)CTATG nc-transcript-variant, intron-variant
rs157910 -- 130,882,916(+) CACAG(C/T)GATGA intron-variant
rs157911 -- 130,883,048(+) CAGAC(C/T)CCAGA intron-variant

Relevant External Links for LINC-PINT Gene

HapMap Linkage Disequilibrium report
LINC-PINT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC-PINT Gene

Disorders for LINC-PINT Gene

Relevant External Links for LINC-PINT

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LINC-PINT
genes like me logo Genes that share disorders with LINC-PINT: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC-PINT Gene

Publications for LINC-PINT Gene

  1. Pint lincRNA connects the p53 pathway with epigenetic silencing by the Polycomb repressive complex 2. (PMID: 24070194) MarA-n-BAcjar O. … Huarte M. (Genome Biol. 2013) 2 67
  2. Multiple knockout mouse models reveal lincRNAs are required for life and brain development. (PMID: 24381249) Sauvageau M. … Rinn J.L. (Elife 2013) 2 67
  3. Germline sequence variants in TGM3 and RGS22 confer risk of basal cell carcinoma. (PMID: 24403052) Stacey S.N. … Stefansson K. (Hum. Mol. Genet. 2014) 67
  4. Genome-wide association study identifies multiple susceptibility loci for pancreatic cancer. (PMID: 25086665) Wolpin B.M. … Amundadottir L.T. (Nat. Genet. 2014) 67
  5. Polymorphisms in ESR1 and FLJ43663 are associated with breast cancer risk in the Han population. (PMID: 24127041) Xia P. … Sun J. (Tumour Biol. 2014) 67

Products for LINC-PINT Gene

Sources for LINC-PINT Gene

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