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Aliases for LINC-PINT Gene

Subcategory (RNA class) for LINC-PINT Gene

antisense

Quality Score for this RNA gene is

3

Aliases for LINC-PINT Gene

  • Long Intergenic Non-Protein Coding RNA, P53 Induced Transcript 2 3
  • MKLN1 Antisense RNA 1 (Head To Head) 2 3
  • P53 Induced Noncoding Transcript 2 3
  • LincRNA-Pint 3
  • MKLN1-AS1 3
  • PINT 3

External Ids for LINC-PINT Gene

ORGUL Members for LINC-PINT Gene

Previous HGNC Symbols for LINC-PINT Gene

  • MKLN1-AS1

Previous GeneCards Identifiers for LINC-PINT Gene

  • GC07M130632

Summaries for LINC-PINT Gene

GeneCards Summary for LINC-PINT Gene

LINC-PINT (Long Intergenic Non-Protein Coding RNA, P53 Induced Transcript) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC-PINT Gene

Genomics for LINC-PINT Gene

Genomic Location for LINC-PINT Gene

Start:
130,941,760 bp from pter
End:
131,110,176 bp from pter
Size:
168,417 bases
Orientation:
Minus strand

Genomic View for LINC-PINT Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC-PINT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC-PINT Gene

No data available for Regulatory Elements for LINC-PINT Gene

Proteins for LINC-PINT Gene

Post-translational modifications for LINC-PINT Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC-PINT Gene

Domains for LINC-PINT Gene

Gene Families for LINC-PINT Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC-PINT: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC-PINT Gene

Function for LINC-PINT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LINC-PINT Gene

Localization for LINC-PINT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC-PINT Gene

Pathways for LINC-PINT Gene

SuperPathways for LINC-PINT Gene

No Data Available

Interacting Proteins for LINC-PINT Gene

Gene Ontology (GO) - Biological Process for LINC-PINT Gene

None

No data available for Pathways by source for LINC-PINT Gene

Transcripts for LINC-PINT Gene

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC-PINT
    • Block miRNA regulation of LINC-PINT using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for LINC-PINT

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for LINC-PINT Gene

    No ASD Table

    Relevant External Links for LINC-PINT Gene

    GeneLoc Exon Structure for
    LINC-PINT
    ECgene alternative splicing isoforms for
    LINC-PINT

    Expression for LINC-PINT Gene

    mRNA expression in normal human tissues for LINC-PINT Gene

    genes like me logo Genes that share expressions with LINC-PINT: view

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for LINC-PINT Gene

    Orthologs for LINC-PINT Gene

    Evolution for LINC-PINT Gene

    ENSEMBL:
    Gene Tree for LINC-PINT (if available)
    TreeFam:
    Gene Tree for LINC-PINT (if available)

    No data available for Orthologs for LINC-PINT Gene

    Paralogs for LINC-PINT Gene

    No data available for Paralogs for LINC-PINT Gene

    Variants for LINC-PINT Gene

    Sequence variations from dbSNP and Humsavar for LINC-PINT Gene

    SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
    rs19114 -- 130,904,765(-) AATAA(A/G)TAACC intron-variant
    rs125124 -- 130,899,925(+) ACCCC(C/G)ACTCC intron-variant
    rs157908 -- 130,880,603(+) TATGA(C/T)ACATT downstream-variant-500B, intron-variant
    rs157909 -- 130,882,086(+) TACTA(A/G)CTATG nc-transcript-variant, intron-variant
    rs157910 -- 130,882,916(+) CACAG(C/T)GATGA intron-variant

    Relevant External Links for LINC-PINT Gene

    HapMap Linkage Disequilibrium report
    LINC-PINT

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for LINC-PINT Gene

    Disorders for LINC-PINT Gene

    No disorders were found for LINC-PINT Gene.

    No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for LINC-PINT Gene

    Publications for LINC-PINT Gene

    1. Pint lincRNA connects the p53 pathway with epigenetic silencing by the Polycomb repressive complex 2. (PMID: 24070194) MarA-n-BAcjar O. … Huarte M. (Genome Biol. 2013) 2 3
    2. Multiple knockout mouse models reveal lincRNAs are required for life and brain development. (PMID: 24381249) Sauvageau M. … Rinn J.L. (Elife 2013) 2 3
    3. Germline sequence variants in TGM3 and RGS22 confer risk of basal cell carcinoma. (PMID: 24403052) Stacey S.N. … Stefansson K. (Hum. Mol. Genet. 2014) 3
    4. Circulating long noncoding RNA, LIPCAR, predicts survival in patients with heart failure. (PMID: 24663402) Kumarswamy R. … Thum T. (Circ. Res. 2014) 3
    5. Polymorphisms in ESR1 and FLJ43663 are associated with breast cancer risk in the Han population. (PMID: 24127041) Xia P. … Sun J. (Tumour Biol. 2014) 3

    Products for LINC-PINT Gene

    Sources for LINC-PINT Gene

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