Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LIMS3-LOC440895 Gene

Subcategory (RNA class) for LIMS3-LOC440895 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LIMS3-LOC440895 Gene

  • LIMS3-LOC440895 Readthrough 3

External Ids for LIMS3-LOC440895 Gene

Summaries for LIMS3-LOC440895 Gene

GeneCards Summary for LIMS3-LOC440895 Gene

LIMS3-LOC440895 (LIMS3-LOC440895 Readthrough) is a RNA Gene, and belongs to ncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LIMS3-LOC440895 Gene

Genomics for LIMS3-LOC440895 Gene

Genomic Location for LIMS3-LOC440895 Gene

Start:
109,898,432 bp from pter
End:
109,968,574 bp from pter
Size:
70,143 bases
Orientation:
Plus strand

Genomic View for LIMS3-LOC440895 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LIMS3-LOC440895 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LIMS3-LOC440895 Gene

No data available for Regulatory Elements for LIMS3-LOC440895 Gene

Proteins for LIMS3-LOC440895 Gene

Post-translational modifications for LIMS3-LOC440895 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LIMS3-LOC440895 Gene

Domains for LIMS3-LOC440895 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for LIMS3-LOC440895 Gene

Function for LIMS3-LOC440895 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LIMS3-LOC440895 Gene

Localization for LIMS3-LOC440895 Gene

No data available for Gene Ontology (GO) - Cellular Components for LIMS3-LOC440895 Gene

Pathways for LIMS3-LOC440895 Gene

SuperPathways for LIMS3-LOC440895 Gene

No Data Available

Interacting Proteins for LIMS3-LOC440895 Gene

Gene Ontology (GO) - Biological Process for LIMS3-LOC440895 Gene

None

No data available for Pathways by source for LIMS3-LOC440895 Gene

Transcripts for LIMS3-LOC440895 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LIMS3-LOC440895 Gene

No ASD Table

Relevant External Links for LIMS3-LOC440895 Gene

GeneLoc Exon Structure for
LIMS3-LOC440895

No data available for mRNA/cDNA for LIMS3-LOC440895 Gene

Expression for LIMS3-LOC440895 Gene

mRNA expression in normal human tissues for LIMS3-LOC440895 Gene

mRNA expression in normal human tissues for LIMS3-LOC440895 Gene
genes like me logo Genes that share expressions with LIMS3-LOC440895: view

Orthologs for LIMS3-LOC440895 Gene

No data available for Orthologs and Evolution for LIMS3-LOC440895 Gene

Paralogs for LIMS3-LOC440895 Gene

No data available for Paralogs for LIMS3-LOC440895 Gene

Variants for LIMS3-LOC440895 Gene

Sequence variations from dbSNP and Humsavar for LIMS3-LOC440895 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs336802 -- 109,935,740(+) CTTTG(C/T)CCCTA intron-variant
rs336803 -- 109,936,674(-) TACTT(G/T)TATGT intron-variant
rs451002 -- 109,945,228(+) ACACA(C/T)TGGTA intron-variant
rs1966906 -- 109,936,801(-) gagtg(C/T)agtgg nc-transcript-variant
rs2437114 -- 109,928,607(+) ACCAA(C/T)GTGGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for LIMS3-LOC440895 Gene

Variant ID Type Subtype PubMed ID
nsv874777 CNV Gain 21882294
nsv510884 CNV Complex 20534489
esv2751812 CNV Loss 17911159
dgv4263n71 CNV Gain 21882294
nsv469649 CNV Complex 16826518
nsv508157 CNV Loss 20534489
esv28875 CNV Gain+Loss 19812545
nsv10114 CNV Gain+Loss 18304495
esv2677490 CNV Deletion 23128226
nsv7324 OTHER Inversion 18451855
esv29077 CNV Gain+Loss 19812545
nsv10123 CNV Gain+Loss 18304495

Relevant External Links for LIMS3-LOC440895 Gene

HapMap Linkage Disequilibrium report
LIMS3-LOC440895

Disorders for LIMS3-LOC440895 Gene

No disorders were found for LIMS3-LOC440895 Gene.

No data available for UniProtKB/Swiss-Prot for LIMS3-LOC440895 Gene

Publications for LIMS3-LOC440895 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PMID: 20967262) Prakash T. … Taylor T.D. (PLoS ONE 2010) 3

Products for LIMS3-LOC440895 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate LIMS3-LOC440895
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for LIMS3-LOC440895
    • Block miRNA regulation of LIMS3-LOC440895 using miScript Target Protectors

    Sources for LIMS3-LOC440895 Gene

    Back to Top

    Content