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Aliases for LIMS3-LOC440895 Gene

Subcategory (RNA class) for LIMS3-LOC440895 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LIMS3-LOC440895 Gene

  • LIMS3-LOC440895 Readthrough 3

External Ids for LIMS3-LOC440895 Gene

Previous GeneCards Identifiers for LIMS3-LOC440895 Gene

  • GC02U901641
  • GC02P110657

Summaries for LIMS3-LOC440895 Gene

GeneCards Summary for LIMS3-LOC440895 Gene

LIMS3-LOC440895 (LIMS3-LOC440895 Readthrough) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LIMS3-LOC440895 Gene

Genomics for LIMS3-LOC440895 Gene

Genomic Location for LIMS3-LOC440895 Gene

Start:
109,898,432 bp from pter
End:
109,968,574 bp from pter
Size:
70,143 bases
Orientation:
Plus strand

Genomic View for LIMS3-LOC440895 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LIMS3-LOC440895 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LIMS3-LOC440895 Gene

No data available for Regulatory Elements for LIMS3-LOC440895 Gene

Proteins for LIMS3-LOC440895 Gene

Post-translational modifications for LIMS3-LOC440895 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LIMS3-LOC440895 Gene

Domains for LIMS3-LOC440895 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LIMS3-LOC440895 Gene

Function for LIMS3-LOC440895 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LIMS3-LOC440895 Gene

Localization for LIMS3-LOC440895 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LIMS3-LOC440895 Gene

Pathways for LIMS3-LOC440895 Gene

SuperPathways for LIMS3-LOC440895 Gene

No Data Available

Interacting Proteins for LIMS3-LOC440895 Gene

Gene Ontology (GO) - Biological Process for LIMS3-LOC440895 Gene

None

No data available for Pathways by source for LIMS3-LOC440895 Gene

Transcripts for LIMS3-LOC440895 Gene

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate LIMS3-LOC440895
    • Block miRNA regulation of LIMS3-LOC440895 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for LIMS3-LOC440895

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for LIMS3-LOC440895 Gene

    No ASD Table

    Relevant External Links for LIMS3-LOC440895 Gene

    GeneLoc Exon Structure for
    LIMS3-LOC440895

    No data available for mRNA/cDNA for LIMS3-LOC440895 Gene

    Expression for LIMS3-LOC440895 Gene

    mRNA expression in normal human tissues for LIMS3-LOC440895 Gene

    mRNA expression in normal human tissues for LIMS3-LOC440895 Gene
    genes like me logo Genes that share expressions with LIMS3-LOC440895: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for LIMS3-LOC440895 Gene

    Orthologs for LIMS3-LOC440895 Gene

    No data available for Orthologs and Evolution for LIMS3-LOC440895 Gene

    Paralogs for LIMS3-LOC440895 Gene

    No data available for Paralogs for LIMS3-LOC440895 Gene

    Variants for LIMS3-LOC440895 Gene

    Sequence variations from dbSNP and Humsavar for LIMS3-LOC440895 Gene

    SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
    rs336802 -- 109,935,740(+) CTTTG(C/T)CCCTA intron-variant
    rs336803 -- 109,936,674(-) TACTT(G/T)TATGT intron-variant
    rs451002 -- 109,945,228(+) ACACA(C/T)TGGTA intron-variant
    rs1966906 -- 109,936,801(-) gagtg(C/T)agtgg nc-transcript-variant
    rs2437114 -- 109,928,607(+) ACCAA(C/T)GTGGC intron-variant

    Structural Variations from Database of Genomic Variants (DGV) for LIMS3-LOC440895 Gene

    Variant ID Type Subtype PubMed ID
    nsv874777 CNV Gain 21882294
    nsv510884 CNV Complex 20534489
    esv2751812 CNV Loss 17911159
    dgv4263n71 CNV Gain 21882294
    nsv469649 CNV Complex 16826518
    nsv508157 CNV Loss 20534489
    esv28875 CNV Gain+Loss 19812545
    nsv10114 CNV Gain+Loss 18304495
    esv2677490 CNV Deletion 23128226
    nsv7324 OTHER Inversion 18451855
    esv29077 CNV Gain+Loss 19812545
    nsv10123 CNV Gain+Loss 18304495

    Relevant External Links for LIMS3-LOC440895 Gene

    HapMap Linkage Disequilibrium report
    LIMS3-LOC440895

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for LIMS3-LOC440895 Gene

    Disorders for LIMS3-LOC440895 Gene

    No disorders were found for LIMS3-LOC440895 Gene.

    No data available for UniProtKB/Swiss-Prot for LIMS3-LOC440895 Gene

    Publications for LIMS3-LOC440895 Gene

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
    3. Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PMID: 20967262) Prakash T. … Taylor T.D. (PLoS ONE 2010) 3

    Products for LIMS3-LOC440895 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate LIMS3-LOC440895
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for LIMS3-LOC440895
      • Block miRNA regulation of LIMS3-LOC440895 using miScript Target Protectors

      Sources for LIMS3-LOC440895 Gene

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