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Aliases for LIMD1-AS1 Gene

Subcategory (RNA class) for LIMD1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LIMD1-AS1 Gene

  • LIMD1 Antisense RNA 1 2 3 5
  • LIMD1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for LIMD1-AS1 Gene

Previous GeneCards Identifiers for LIMD1-AS1 Gene

  • GC03M045719

Summaries for LIMD1-AS1 Gene

GeneCards Summary for LIMD1-AS1 Gene

LIMD1-AS1 (LIMD1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LIMD1-AS1 Gene

Genomics for LIMD1-AS1 Gene

Regulatory Elements for LIMD1-AS1 Gene

Enhancers for LIMD1-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around LIMD1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for LIMD1-AS1 Gene

Chromosome:
3
Start:
45,678,165 bp from pter
End:
45,689,134 bp from pter
Size:
10,970 bases
Orientation:
Minus strand

Genomic View for LIMD1-AS1 Gene

Genes around LIMD1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LIMD1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LIMD1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LIMD1-AS1 Gene

Proteins for LIMD1-AS1 Gene

Post-translational modifications for LIMD1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LIMD1-AS1 Gene

Domains & Families for LIMD1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LIMD1-AS1 Gene

Function for LIMD1-AS1 Gene

Phenotypes for LIMD1-AS1 Gene

GenomeRNAi human phenotypes for LIMD1-AS1:
genes like me logo Genes that share phenotypes with LIMD1-AS1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LIMD1-AS1 Gene

Localization for LIMD1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LIMD1-AS1 Gene

Pathways & Interactions for LIMD1-AS1 Gene

SuperPathways for LIMD1-AS1 Gene

No Data Available

Interacting Proteins for LIMD1-AS1 Gene

Gene Ontology (GO) - Biological Process for LIMD1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LIMD1-AS1 Gene

Drugs & Compounds for LIMD1-AS1 Gene

No Compound Related Data Available

Transcripts for LIMD1-AS1 Gene

mRNA/cDNA for LIMD1-AS1 Gene

(3) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LIMD1-AS1 Gene

LIMD1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LIMD1-AS1 Gene

No ASD Table

Relevant External Links for LIMD1-AS1 Gene

GeneLoc Exon Structure for
LIMD1-AS1
ECgene alternative splicing isoforms for
LIMD1-AS1

Expression for LIMD1-AS1 Gene

mRNA expression in normal human tissues for LIMD1-AS1 Gene

SOURCE GeneReport for Unigene cluster for LIMD1-AS1 Gene Hs.712889

genes like me logo Genes that share expression patterns with LIMD1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for LIMD1-AS1 Gene

Orthologs for LIMD1-AS1 Gene

Evolution for LIMD1-AS1 Gene

ENSEMBL:
Gene Tree for LIMD1-AS1 (if available)
TreeFam:
Gene Tree for LIMD1-AS1 (if available)

No data available for Orthologs for LIMD1-AS1 Gene

Paralogs for LIMD1-AS1 Gene

No data available for Paralogs for LIMD1-AS1 Gene

Variants for LIMD1-AS1 Gene

Sequence variations from dbSNP and Humsavar for LIMD1-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs15907 -- 45,686,262(-) AGGAA(A/G)GGGCT intron-variant
rs2578675 -- 45,684,870(-) aataa(G/T)caagc intron-variant
rs2578676 -- 45,684,826(-) acctg(G/T)aagac intron-variant
rs2578677 -- 45,684,291(-) ACAGG(C/G)CCCAG intron-variant
rs2578678 -- 45,683,822(-) gcaca(A/T)agcaa intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LIMD1-AS1 Gene

Disorders for LIMD1-AS1 Gene

Relevant External Links for LIMD1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LIMD1-AS1

No disorders were found for LIMD1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LIMD1-AS1 Gene

Publications for LIMD1-AS1 Gene

  1. Genome-wide association study identifies three novel susceptibility loci for severe Acne vulgaris. (PMID: 24927181) Navarini A.A. … Barker J.N. (Nat Commun 2014) 3 67
  2. Pharmacogenomic study of side-effects for antidepressant treatment options in STAR*D. (PMID: 22041458) Clark S.L. … van den Oord E.J. (Psychol Med 2012) 3

Products for LIMD1-AS1 Gene

Sources for LIMD1-AS1 Gene

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