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Aliases & Descriptions for LIF
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| CDF 1, 2 | | DIA 2 | | Emfilermin 3 | | HILDA 2, 3, 5 | | MLPLI 3 |
| | | Descriptions |
|---|
| D factor 2, 3 | | Differentiation-stimulating factor 3 | | Melanoma-derived LPL inhibitor 3 | | cholinergic differentiation factor 2 | | differentiation inhibitory activity 2 | | differentiation stimulating factor 2 | leukemia inhibitory factor (cholinergic differentiation factor) 2 |
|
| | Search outside databases for aliases for LIF genePrevious GC identifer: GC22M027332 |
Summaries for LIF(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for LIF: The protein encoded by this gene is a pleiotropic cytokine with roles in several different systems. It is involved in the induction of hematopoietic differentiation in normal and myeloid leukemia cells, induction of neuronal cell differentiation, regulator of mesenchymal to epithelial conversion during kidney development, and may also have a role in immune tolerance at the maternal-fetal interface. [provided by RefSeq] UniProtKB/Swiss-Prot: LIF_HUMAN, P15018Function: LIF has the capacity to induce terminal differentiation in leukemic cells. Its activities include the induction of hematopoietic differentiation in normal and myeloid leukemia cells, the induction of neuronal cell differentiation, and the stimulation of acute-phase protein synthesis in hepatocytesGene Wiki entry for LIF (Leukemia_inhibitory_factor) |
Genomic Location for LIF
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the LIF gene 
Entrez Gene cytogenetic band: 22q12.2 Ensembl cytogenetic band: 22q12.2 HGNC cytogenetic band: 22q12.2LIF Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 22 GeneLoc Exon Structure GeneLoc location for GC22M028960:
(about GC identifiers)
Start:
|
28,966,441 bp from pter |
End:
|
28,972,748 bp from pter |
Size:
|
6,308 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000022.9 NT_011520.11
| Proteins for LIF
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: LIF_HUMAN, P15018 (See
protein sequence)Recommended Name: Leukemia inhibitory factor precursor Size: 202 amino acids; 22008 Da
Subcellular location: Secreted
PDB structures from and Proteopedia :1A7M (3D)
 1EMR (3D)
 1PVH (3D)
 2Q7N (3D)
 
Secondary accessions: Q52LZ2REFSEQ proteins: NP_002300.1
ENSEMBL proteins: ENSP00000249075 ENSP00000384450
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
2 Gene Ontology (GO) cellular component terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005576 | extracellular region |
IEA | -- | | GO:0005615 | extracellular space |
IEA | -- | About this table
Antibodies for LIF: Assays for LIF: | Protein
Domains/ Families for LIF(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P15018
ProtoNet protein and cluster: P15018 1 Blocks protein family: IPB003624 Leukemia inhibitory factor
UniProtKB/Swiss-Prot: LIF_HUMAN, P15018Similarity: Belongs to the LIF/OSM family | Gene Function for LIF
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002309
Applied Biosystems Silencer® siRNAs for LIF
Sigma-Aldrich siRNA and siRNA Panels for LIF  Sigma-Aldrich shRNA Panels and shRNA for LIF  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_002309                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002309                                  untagged cDNA clone in CMV expression vector: NM_002309 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002309
UniProtKB/Swiss-Prot: LIF_HUMAN, P15018Function: LIF has the capacity to induce terminal differentiation in leukemic cells. Its activities include the induction of hematopoietic differentiation in normal and myeloid leukemia cells, the induction of neuronal cell differentiation, and the stimulation of acute-phase protein synthesis in hepatocytesGenatlas biochemistry entry for LIF:leukemia inhibitory factor (differentiation-stimulating factor),interleukin-6 cytokine family member stimulating hematopoiesis,platelet production,localized distally to the breakpoint in t(11;22)(q24;q12)6 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Lif):
3 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for LIF
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
1 Sigma-Aldrich "Your Favorite Gene" Pathway for LIF (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for LIF 
5/77 Interacting proteins for LIF (ENSP000002490753 P150182) via UniProtKB, MINT, and/or STRING (see all 77
)About this table
5/11 Gene Ontology (GO) biological process terms (links to tree view) (see all 11
): About this table
|
Drugs & Compounds for LIF(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for LIF UniProtKB/Swiss-Prot: LIF_HUMAN, P15018Pharmaceutical: In phase II clinical trial. The drug is being developed by Amrad to assist embryo implantation in women who have failed to become pregnant despite assisted reproductive technologies (ART) 10/57 Novoseek chemical compound relationships for LIF gene (see all 57
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| gp 130 |
95.56 |
399 |
12799551 (5), 9568895 (5), 9712900 (5), 12574225 (4) (see all 99) |
| toxohormone-l |
66.26 |
2 |
7622421 (1), 8765417 (1) |
| tyrosine |
54.39 |
49 |
8900046 (3), 18174171 (2), 8174677 (2), 7688764 (2) (see all 34) |
| tgf beta1 |
46.24 |
13 |
9714521 (2), 14968036 (2), 17034864 (1), 14627547 (1) (see all 9) |
| progesterone |
45.11 |
68 |
9835355 (5), 16055453 (4), 11574494 (3), 11062850 (3) (see all 33) |
| pd 98,059 |
40.49 |
6 |
10217263 (1), 12145097 (1), 18252965 (1), 17392578 (1) (see all 5) |
| rantes |
39.08 |
15 |
12620497 (2), 8626989 (2), 15708128 (1), 9764576 (1) (see all 10) |
| acth |
35.09 |
72 |
7883977 (5), 8923879 (5), 18638665 (4), 8770940 (4) (see all 19) |
| ribonucleic acid |
29.39 |
7 |
11314490 (1), 10833369 (1), 10842275 (1), 12605541 (1) (see all 5) |
| chymotrypsinogen |
24.79 |
3 |
10022823 (1), 7592653 (1) |
About this table
|
Transcripts for LIF(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002309
Sigma-Aldrich siRNA and siRNA Panels for LIF  Sigma-Aldrich shRNA Panels and shRNA for LIF  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_002309 REFSEQ mRNAs for LIF gene: NM_002309.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002309               OriGene GFP tagged cDNA clone in CMV expression vector: NM_002309                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002309                                  untagged cDNA clone in CMV expression vector: NM_002309  Additional cDNA sequence: AK315310.1 BC069540.1 BC093733.1 BC093735.1 BC143305.1 X13967.1 2 DOTS entries: DT.210986 DT.100744740 24/47 AceView cDNA sequences (see all 47
):R50018 BC069540 BM129796 H55709 BU175373 CK819709 AL711919 BE349408 CA430261 AI889752 BU197122 BP366214 CB217076 BX099968 BM561741 BQ691666 X13967 CD614554 NM_002309 CO249535 AW571472 AI570795 AI983629 CB216985
highest scoring ESTs for LIF:X13967 BC069540 H55709 AI147138 AI287298 AI796373 AI889752 AI922369 AI983629 AL711919 Unigene Cluster for LIF: Leukemia inhibitory factor (cholinergic differentiation factor) Hs.2250 [show with all ESTs]Unigene Representative Sequence: NM_002309
GeneLoc Exon Structure
2 Ensembl transcripts including schematic representations: ENST00000249075
ENST00000403987
|
Expression for LIF
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| LIF expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for LIF
1 / 2 / 3 3 probe-sets matching LIF gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GCCTTGGGTG
SOURCE GeneReport for Unigene cluster: Hs.2250
Expression variation in blood from EXPOLDB for LIF |
Orthologs for LIF
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for LIF gene from 5/6 species (see all 6
)
About this table Species with no ortholog for LIF
ENSEMBL Gene Tree for LIF | Paralogs for LIF(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for LIF(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for LIF (up to first 250kb)
|
Disorders & Mutations for LIF
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 159540
10/92 Novoseek disease relationships for LIF gene (see all 92
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| leukemia |
94.90 |
2538 |
10212267 (7), 9822513 (7), 8987949 (7), 18240017 (6) (see all 99) |
| necrosis |
55.09 |
144 |
8313662 (2), 8137298 (2), 7760346 (2), 16477612 (2) (see all 97) |
| myeloid leukemia |
53.47 |
20 |
1908551 (2), 8564713 (1), 8462021 (1), 8632998 (1) (see all 13) |
| abortion inevitable |
52.57 |
20 |
16640878 (4), 11930689 (3) |
| response acute phase |
52.04 |
11 |
1714773 (2), 1281789 (1), 12773095 (1), 1718962 (1) (see all 9) |
| miscarriage recurrent |
50.09 |
18 |
16126674 (3), 9734394 (3), 17034864 (1), 17156190 (1) (see all 8) |
| neuroepithelioma |
47.24 |
5 |
7622421 (1), 8765417 (1), 14647442 (1) |
| complement deficiency |
46.54 |
1 |
7660072 (1) |
| carcinoma embryonal |
43.11 |
8 |
1322335 (2), 15641927 (2), 10366419 (1), 10202003 (1) (see all 5) |
| choriocarcinoma |
42.14 |
6 |
16125646 (1), 8833034 (1), 12606473 (1), 15837065 (1) (see all 5) |
About this table
Human Gene Mutation Database: LIF Genetic Association Database: LIF Human Genome Epidemiology Navigator: LIF (10 documents) Tumor Gene Database: LIF
|
Medical News for LIF(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for LIF (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/1060 PubMed articles for LIF gene (see all 1060
):- An unusual cytokine:Ig-domain interaction revealed in the crystal structure of leukemia inhibitory factor (LIF) in complex with the LIF receptor. (PubMed id 17652170)1, 3, 4 Huyton T....Garrett T.P. (2007)
- Convergent mechanisms for recognition of divergent cytokines by the shared signaling receptor gp130. (PubMed id 14527405)1, 3, 4 Boulanger M.J.... Garcia K.C. (2003)
- Neuropoietic cytokines in the hematopoietic fold. (PubMed id 1714745)1, 2, 3 Bazan J.F. (1991)
- No association of leukemia inhibitory factor (LIF) DNA polymorphisms with multiple sclerosis. (PubMed id 16263181)1, 3, 6 Vanderlocht J....Hellings N. (2006)
- Linkage disequilibrium and haplotype analysis among four novel single-nucleotide polymorphisms in the human leukemia inhibitory factor (LIF) gene. (PubMed id 11587067)1, 3, 6 Ishida R....Emi M. (2001)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- The DNA sequence of human chromosome 22. (PubMed id 10591208)3, 4 Dunham I....O'Brien K.P. (1999)
- Solution structure of leukemia inhibitory factor. (PubMed id 9593715)3, 4 Hinds M.G.... Norton R.S. (1998)
- Leukemia inhibitory factor, a cytokine at the interface between neurobiology and immunology. (PubMed id 8058719)2, 3 Patterson P.H. (1994)
- Glycosylation pattern and disulfide assignments of recombinant human differentiation-stimulating factor. (PubMed id 8489250)3, 4 Schmelzer C.H....Burton L.E. (1993)
|
Search for LIF
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing LIF
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing LIF
(According to HUGE)
About This Section
| -- |
Specialized Databases showing LIF(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for LIF(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for LIF:

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| | Recombinant Proteins (LIF) | | Antibodies (LIF) |
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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