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Aliases for LEMD1-AS1 Gene

Subcategory (RNA class) for LEMD1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LEMD1-AS1 Gene

  • LEMD1 Antisense RNA 1 2 3 5
  • LEMD1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for LEMD1-AS1 Gene

Previous GeneCards Identifiers for LEMD1-AS1 Gene

  • GC01P205345

Summaries for LEMD1-AS1 Gene

GeneCards Summary for LEMD1-AS1 Gene

LEMD1-AS1 (LEMD1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LEMD1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LEMD1-AS1 Gene

Genomics for LEMD1-AS1 Gene

Regulatory Elements for LEMD1-AS1 Gene

Enhancers for LEMD1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H205343 1.5 Ensembl ENCODE dbSUPER 10.8 -29.3 -29325 1.3 FOXA2 FEZF1 ZNF2 TCF12 GLIS2 SP3 SP5 REST PPARG GLIS1 KLHDC8A NUAK2 LEMD1-AS1 CDK18 SNRPGP10
GH01H205479 1.4 FANTOM5 Ensembl ENCODE 10.7 +107.9 107891 3 HDGF PKNOX1 RB1 BMI1 ZNF121 SCRT2 ZNF143 ATF7 IKZF2 CEBPB CDK18 LEMD1 LOC284577 MIR135B KLHDC8A LEMD1-AS1 NUAK2 MFSD4A RAB29 CNTN2
GH01H205430 1.2 Ensembl ENCODE 10.7 +57.6 57570 0.8 HDAC1 PKNOX1 RB1 TBL1XR1 ARNT ARID4B RAD21 GLIS2 EGR1 ZNF143 MDM4 LOC284577 LEMD1 CDK18 LEMD1-AS1 KLHDC8A MFSD4A ELK4 MIR135B LOC105371698
GH01H205370 1.3 Ensembl ENCODE dbSUPER 9.1 +0.8 754 6.4 TBP CTCF FOXA2 KLF17 FEZF1 ZFHX2 ELK1 GLI2 ZNF366 ZSCAN5C KLHDC8A MIR135B CDK18 MFSD4A LEMD1-AS1 LOC105371698
GH01H205485 1 ENCODE 10.7 +112.4 112406 0.2 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 GLIS2 GATA2 ZNF143 ZNF207 LOC284577 LEMD1 MIR135B KLHDC8A LEMD1-AS1 NUAK2 MFSD4A TRK-TTT8-1 CDK18
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LEMD1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LEMD1-AS1 Gene

Genomic Locations for LEMD1-AS1 Gene
14,189 bases
Plus strand

Genomic View for LEMD1-AS1 Gene

Genes around LEMD1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LEMD1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LEMD1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LEMD1-AS1 Gene

Proteins for LEMD1-AS1 Gene

Post-translational modifications for LEMD1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LEMD1-AS1 Gene

Domains & Families for LEMD1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LEMD1-AS1 Gene

Function for LEMD1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LEMD1-AS1 Gene

Localization for LEMD1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LEMD1-AS1 Gene

Pathways & Interactions for LEMD1-AS1 Gene

SuperPathways for LEMD1-AS1 Gene

No Data Available

Interacting Proteins for LEMD1-AS1 Gene

Gene Ontology (GO) - Biological Process for LEMD1-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for LEMD1-AS1 Gene

Drugs & Compounds for LEMD1-AS1 Gene

No Compound Related Data Available

Transcripts for LEMD1-AS1 Gene

mRNA/cDNA for LEMD1-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LEMD1-AS1 Gene

LEMD1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LEMD1-AS1 Gene

No ASD Table

Relevant External Links for LEMD1-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LEMD1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LEMD1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for LEMD1-AS1 Gene

This gene is overexpressed in Ovary (x25.9), Adrenal Gland (x14.7), and Testis (x6.2).

SOURCE GeneReport for Unigene cluster for LEMD1-AS1 Gene:

genes like me logo Genes that share expression patterns with LEMD1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LEMD1-AS1 Gene

Orthologs for LEMD1-AS1 Gene

Evolution for LEMD1-AS1 Gene

Gene Tree for LEMD1-AS1 (if available)
Gene Tree for LEMD1-AS1 (if available)

No data available for Orthologs for LEMD1-AS1 Gene

Paralogs for LEMD1-AS1 Gene

No data available for Paralogs for LEMD1-AS1 Gene

Variants for LEMD1-AS1 Gene

Sequence variations from dbSNP and Humsavar for LEMD1-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000144175 -- 205,386,609(+) CTGTG(-/C)CCCCC intron-variant, nc-transcript-variant
rs1000230743 -- 205,373,116(+) GGAAA(A/C/T)GAGGA upstream-variant-2KB
rs1000256339 -- 205,379,434(+) AACTC(C/T)AGACT intron-variant, upstream-variant-2KB
rs1000496965 -- 205,385,290(+) CCTCC(C/T)GGGTT intron-variant, nc-transcript-variant
rs1000574705 -- 205,374,454(+) TCGAC(A/T)CAAGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for LEMD1-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1014629 CNV gain 25217958
nsv832381 CNV gain 17160897

Relevant External Links for LEMD1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LEMD1-AS1 Gene

Disorders for LEMD1-AS1 Gene

Relevant External Links for LEMD1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for LEMD1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LEMD1-AS1 Gene

Publications for LEMD1-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60

Products for LEMD1-AS1 Gene

Sources for LEMD1-AS1 Gene

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