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Aliases for LDHAL6EP Gene

Aliases for LDHAL6EP Gene

  • Lactate Dehydrogenase A Like 6E, Pseudogene 2 3

External Ids for LDHAL6EP Gene

Previous GeneCards Identifiers for LDHAL6EP Gene

  • GC04M072302

Summaries for LDHAL6EP Gene

GeneCards Summary for LDHAL6EP Gene

LDHAL6EP (Lactate Dehydrogenase A Like 6E, Pseudogene) is a Pseudogene.

Additional gene information for LDHAL6EP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LDHAL6EP Gene

Genomics for LDHAL6EP Gene

GeneHancer (GH) Regulatory Elements for LDHAL6EP Gene

Promoters and enhancers for LDHAL6EP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I071472 Enhancer 0.3 ENCODE 5.5 -35.5 -35460 1.4 FOS LDHAL6EP GC04M071452 LOC105377271 SLC4A4
GH04I071406 Enhancer 0.8 ENCODE 0.3 +31.4 31375 0.1 HDAC1 PKNOX1 ATF1 TCF12 ZNF766 GATA2 ATF7 NCOA1 ELF1 MBD2 LDHAL6EP ENSG00000249170 SLC4A4
GH04I071338 Promoter/Enhancer 1.2 EPDnew ENCODE 0.2 +98.7 98745 0.6 PKNOX1 BMI1 BATF IRF4 FOSL1 ATF7 FOS BCLAF1 IKZF2 RUNX3 SLC4A4 ENSG00000249170 LDHAL6EP
GH04I071449 Enhancer 0.3 FANTOM5 0.4 -11.8 -11756 0.4 YY1 SLC4A4 GC04M071452 LDHAL6EP
GH04I071377 Enhancer 0.6 ENCODE 0.2 +60.2 60155 0.2 JUN ZEB2 HIC1 ZNF335 FOSL1 PRDM6 ZNF629 CREB1 FOSL2 FOS LDHAL6EP ENSG00000249170 SLC4A4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LDHAL6EP on UCSC Golden Path with GeneCards custom track

Genomic Locations for LDHAL6EP Gene

Genomic Locations for LDHAL6EP Gene
chr4:71,434,405-71,437,924
(GRCh38/hg38)
Size:
3,520 bases
Orientation:
Minus strand
chr4:72,300,122-72,303,641
(GRCh37/hg19)

Genomic View for LDHAL6EP Gene

Genes around LDHAL6EP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LDHAL6EP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LDHAL6EP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LDHAL6EP Gene

Proteins for LDHAL6EP Gene

Post-translational modifications for LDHAL6EP Gene

No Post-translational modifications

No data available for DME Specific Peptides for LDHAL6EP Gene

Domains & Families for LDHAL6EP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LDHAL6EP Gene

Function for LDHAL6EP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LDHAL6EP Gene

Localization for LDHAL6EP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LDHAL6EP Gene

Pathways & Interactions for LDHAL6EP Gene

SuperPathways for LDHAL6EP Gene

No Data Available

Interacting Proteins for LDHAL6EP Gene

Gene Ontology (GO) - Biological Process for LDHAL6EP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LDHAL6EP Gene

Drugs & Compounds for LDHAL6EP Gene

No Compound Related Data Available

Transcripts for LDHAL6EP Gene

mRNA/cDNA for LDHAL6EP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LDHAL6EP Gene

No ASD Table

Relevant External Links for LDHAL6EP Gene

GeneLoc Exon Structure for
LDHAL6EP
ECgene alternative splicing isoforms for
LDHAL6EP

Expression for LDHAL6EP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LDHAL6EP Gene

mRNA differential expression in normal tissues according to GTEx for LDHAL6EP Gene

This gene is overexpressed in Pancreas (x17.1) and Kidney - Cortex (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of LDHAL6EP Gene:

LDHAL6EP
genes like me logo Genes that share expression patterns with LDHAL6EP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LDHAL6EP Gene

Orthologs for LDHAL6EP Gene

Evolution for LDHAL6EP Gene

ENSEMBL:
Gene Tree for LDHAL6EP (if available)
TreeFam:
Gene Tree for LDHAL6EP (if available)

No data available for Orthologs for LDHAL6EP Gene

Paralogs for LDHAL6EP Gene

No data available for Paralogs for LDHAL6EP Gene

Variants for LDHAL6EP Gene

Additional Variant Information for LDHAL6EP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LDHAL6EP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LDHAL6EP Gene

Disorders for LDHAL6EP Gene

No disorders were found for LDHAL6EP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LDHAL6EP Gene

Publications for LDHAL6EP Gene

No publications were found for LDHAL6EP Gene.

Products for LDHAL6EP Gene

Sources for LDHAL6EP Gene

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