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Aliases for LARP1P1 Gene

Aliases for LARP1P1 Gene

  • La Ribonucleoprotein Domain Family Member 1 Pseudogene 1 2 3 5
  • HLA Complex Group 10 Pseudogene 2 3
  • La Ribonucleoprotein Domain Family, Member 1 Pseudogene 1 2
  • DJ221C16.7 3
  • HCG10P 3

External Ids for LARP1P1 Gene

Previous HGNC Symbols for LARP1P1 Gene

  • HCG10P

Previous GeneCards Identifiers for LARP1P1 Gene

  • GC06P026175
  • GC06P026187
  • GC06P026260
  • GC06P026302
  • GC06P026245
  • GC06P026343
  • GC06P026385
  • GC06P026414
  • GC06P026485
  • GC06P026753
  • GC06P026852

Summaries for LARP1P1 Gene

GeneCards Summary for LARP1P1 Gene

LARP1P1 (La Ribonucleoprotein Domain Family Member 1 Pseudogene 1) is a Pseudogene.

Additional gene information for LARP1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LARP1P1 Gene

Genomics for LARP1P1 Gene

GeneHancer (GH) Regulatory Elements for LARP1P1 Gene

Promoters and enhancers for LARP1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I026163 Enhancer 0.7 ENCODE dbSUPER 550.8 -0.1 -89 1.1 NFIC SMAD5 POLR2A MLLT1 GC06P027078 LARP1P1 ENSG00000283064 HIST1H2BD GC06P027072
GH06I026164 Enhancer 0.3 dbSUPER 550.8 +1.6 1554 1.9 ATF4 GC06P027078 LARP1P1 HIST1H3E ENSG00000283064 HIST1H2BD HIST1H2BE
GH06I026193 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 11.8 +36.8 36759 14.6 ZFP64 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC ENSG00000282988 HIST1H2AD HIST1H2BF HIST1H3D HIST1H4E RPS10P1 ABT1 HMGN4 BTN2A3P BTN2A1
GH06I026248 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 11.1 +91.3 91337 12.9 HDGF PKNOX1 FOXA2 SMAD1 MLX ARNT ARID4B SIN3A IRF4 YY1 HIST1H2BH HIST1H3F LOC105374986 ABT1 HMGN4 BTN2A1 BTN2A3P HIST1H3E BTN2A2 ZNF322
GH06I026086 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10 -76.0 -75957 2.8 SMAD1 ATF1 DMAP1 ZNF48 YY1 SLC30A9 ZNF766 GLIS2 E2F8 ATF7 GC06P026086 HFE ENSG00000272462 HIST1H1C HIST1H1T LARP1P1 HIST1H2BE BTN3A2 GC06P026096 GC06P025915
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LARP1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LARP1P1 Gene

Genomic Locations for LARP1P1 Gene
chr6:26,164,033-26,168,176
(GRCh38/hg38)
Size:
4,144 bases
Orientation:
Plus strand
chr6:26,164,261-26,168,404
(GRCh37/hg19)

Genomic View for LARP1P1 Gene

Genes around LARP1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LARP1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LARP1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LARP1P1 Gene

Proteins for LARP1P1 Gene

Post-translational modifications for LARP1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LARP1P1 Gene

Domains & Families for LARP1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LARP1P1 Gene

Function for LARP1P1 Gene

Phenotypes From GWAS Catalog for LARP1P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LARP1P1 Gene

Localization for LARP1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LARP1P1 Gene

Pathways & Interactions for LARP1P1 Gene

SuperPathways for LARP1P1 Gene

No Data Available

Interacting Proteins for LARP1P1 Gene

Gene Ontology (GO) - Biological Process for LARP1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LARP1P1 Gene

Drugs & Compounds for LARP1P1 Gene

No Compound Related Data Available

Transcripts for LARP1P1 Gene

mRNA/cDNA for LARP1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LARP1P1 Gene

No ASD Table

Relevant External Links for LARP1P1 Gene

GeneLoc Exon Structure for
LARP1P1
ECgene alternative splicing isoforms for
LARP1P1

Expression for LARP1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LARP1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of LARP1P1 Gene:

LARP1P1
genes like me logo Genes that share expression patterns with LARP1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LARP1P1 Gene

Orthologs for LARP1P1 Gene

Evolution for LARP1P1 Gene

ENSEMBL:
Gene Tree for LARP1P1 (if available)
TreeFam:
Gene Tree for LARP1P1 (if available)

No data available for Orthologs for LARP1P1 Gene

Paralogs for LARP1P1 Gene

No data available for Paralogs for LARP1P1 Gene

Variants for LARP1P1 Gene

Additional Variant Information for LARP1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LARP1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LARP1P1 Gene

Disorders for LARP1P1 Gene

No disorders were found for LARP1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LARP1P1 Gene

Publications for LARP1P1 Gene

No publications were found for LARP1P1 Gene.

Products for LARP1P1 Gene

Sources for LARP1P1 Gene

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