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Aliases & Descriptions for LAP3
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EC 3.4.11.1,EC 3.4.11.5 3 | | LAP 1, 2, 3 | | LAPEP 1, 2, 3 | | PEPS 2, 3 |
| | | Descriptions |
|---|
| Leucine aminopeptidase 3 | | Leucyl aminopeptidase 3 | | Peptidase S 1, 2, 3 | | Proline aminopeptidase 3 | | Prolyl aminopeptidase 3 | | leucine aminopeptidase 3 2, 3 |
|
| | Search outside databases for aliases for LAP3 genePrevious GC identifers: GC04P017393 GC04P017520 GC04P017267 GC04P017329 |
Summaries for LAP3(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: AMPL_HUMAN, P28838Function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides |
Genomic Location for LAP3
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the LAP3 gene 
Entrez Gene cytogenetic band: 4p15.32 Ensembl cytogenetic band: 4p15.32 HGNC cytogenetic band: 4p15.33LAP3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 4 GeneLoc Exon Structure GeneLoc location for GC04P017255:
(about GC identifiers)
Start:
|
17,188,025 bp from pter |
End:
|
17,218,688 bp from pter |
Size:
|
30,664 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000004.10 NT_006316.15
| Proteins for LAP3
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: AMPL_HUMAN, P28838 (See
protein sequence)Recommended Name: Cytosol aminopeptidase Size: 519 amino acids; 56166 Da
Cofactor: Binds 2 zinc ions per subunit. One zinc ion is tightly bound and essential for enzyme activity, while the second metal coordination site can be occupied by zinc, magnesium or manganese to give enzymes of different activities (By similarity)
Subunit: Homohexamer
Subcellular location: Cytoplasm
Secondary accessions: Q6IAM6 Q6P0L6 Q9UQE3Alternative initiation: 2 isoforms: P28838-1 P28838-2 Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_056991.2
ENSEMBL proteins: ENSP00000226299
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: LAP3 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for LAP3: Assays for LAP3: | Protein
Domains/ Families for LAP3(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P28838
ProtoNet protein and cluster: P28838 1 Blocks protein family: IPB000819 Cytosol aminopeptidase
UniProtKB/Swiss-Prot: AMPL_HUMAN, P28838Similarity: Belongs to the peptidase M17 family | Gene Function for LAP3
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_015907
Applied Biosystems Silencer® siRNAs for LAP3
Sigma-Aldrich siRNA and siRNA Panels for LAP3  Sigma-Aldrich shRNA for LAP3  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_015907                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_015907                                  untagged cDNA clones in CMV expression vector (see all 2): NM_015907 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_015907
UniProtKB/Swiss-Prot: AMPL_HUMAN, P28838Function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptidesCatalytic activity: Release of an N-terminal amino acid, Xaa- -Yaa-, in which Xaa is preferably Leu, but may be other amino acids including Pro although not Arg or Lys, and Yaa may be Pro. Amino acid amides and methyl esters are also readily hydrolyzed, but rates on arylamides are exceedingly lowCatalytic activity: Release of N-terminal proline from a peptideEnzyme Number (IUBMB): EC 3.4.11.1,EC 1 MGI mutant phenotype (inferred from 2 alleles ) (MGI details for Lap3):
5/6 Gene Ontology (GO) molecular function terms (links to tree view) (see all 6
): About this table | Pathways & Interactions for LAP3
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| 2 Sigma-Aldrich "Your Favorite Gene" Pathways for LAP3 (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for LAP3 
5/28 Interacting proteins for LAP3 (ENSP000002262993) via UniProtKB, MINT, and/or STRING (see all 28
)About this table
2 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for LAP3(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  |
Enzo Life Sciences drugs & compounds for LAP3 |
 | Sigma-Aldrich Small Molecules for LAP3: Inhibitor |
Browse Tocris compounds for LAP3 10/18 Novoseek chemical compound relationships for LAP3 gene (see all 18
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| leucine |
92.62 |
336 |
7690169 (4), 9777099 (4), 11846784 (3), 8670787 (3) (see all 99) |
| bestatin |
78.28 |
7 |
1786199 (2), 7871971 (1), 9477117 (1), 1912369 (1) |
| heptanoate |
77.94 |
1 |
16125815 (1) |
| proline |
51.94 |
24 |
1892204 (7), 18476142 (3), 18475340 (2), 7988901 (2) (see all 13) |
| 1,10-phenanthroline |
48.60 |
2 |
18155948 (1), 12568801 (1) |
| p-nitroaniline |
44.09 |
1 |
10805534 (1) |
| zinc |
23.88 |
4 |
1793007 (1), 8872532 (1), 11743734 (1), 14695154 (1) |
| putrescine |
10.45 |
1 |
8357044 (1) |
| epoxide |
10.12 |
2 |
8951032 (1), 11601994 (1) |
| flavonoid |
6.77 |
2 |
7673925 (1), 9793838 (1) |
About this table
|
Transcripts for LAP3(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_015907
Sigma-Aldrich siRNA and siRNA Panels for LAP3  Sigma-Aldrich shRNA for LAP3  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_015907 REFSEQ mRNAs for LAP3 gene: NM_015907.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_015907               OriGene GFP tagged cDNA clone in CMV expression vector: NM_015907                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_015907                                  untagged cDNA clones in CMV expression vector (see all 2): NM_015907  Additional cDNA sequence: AF061738.1 AK022055.1 AK130293.1 AK225511.1 AK298613.1 AK298790.1 AK307723.1 BC006199.2 BC065564.1 CR457128.1 CR593546.1 CR601185.1 CR602931.1 CR604573.1 CR605730.1 CR615225.1 CR620660.1 CR623098.1 22 DOTS entries: DT.121239044 DT.452853 DT.99943191 DT.100844073 DT.95252831 DT.100844072 DT.100844084 DT.92445667 DT.121239032 DT.121238992 DT.121238997 DT.121239046 DT.100844079 DT.102827512 DT.121239023 DT.121239026 DT.121239033 DT.121239045 DT.121393164 DT.95110650 DT.95252835 DT.100844083 24/357 AceView cDNA sequences (see all 357
):BQ773241 NM_015907 BP351843 AL547557 AL556498 AL524453 BF433958 AA707177 BG944575 AI653901 BM800626 AU142824 N25999 BU154380 BM129769 CK819688 BM141945 CB151630 BQ065044 CA306348 CB127281 CR601185 AA134138 CK819689
highest scoring ESTs for LAP3:AF034175 AA025244 AA027997 AA034306 AA034307 AA043521 AA132093 AA132193 AA134138 AA225762 Unigene Cluster for LAP3: Leucine aminopeptidase 3 Hs.570791 [show with all ESTs]Unigene Representative Sequence: AF061738
GeneLoc Exon Structure
5/10 Alternative Splicing Database (ASD) splice patterns (SP) for LAP3 (see all 10
)
| ExUns: | 1a | · | 1b | · | 1c | ^ | 2 | ^ | 3a | · | 3b | · | 3c | ^ | 4a | · | 4b | ^ | 5a | · | 5b | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9a | · | 9b | · | 9c | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13 | ^ | 14a | · | 14b | ^ | 15a | · | 15b | ^ | 16a | · | |
| SP1: | |   | |   | |   | |   | |   | |   | - |   | |   | - |   | - |   | |   | |   | - |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | - |   | - |   | - |   | |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | - |   | |   | - |   | - |   | |   | - |   | - |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for LAP3
1 Ensembl transcript including schematic representation: ENST00000226299
|
Expression for LAP3
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| LAP3 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for LAP3
1 / 2 / 3 3 probe-sets matching LAP3 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: AGCAAACTGA
SOURCE GeneReport for Unigene cluster: Hs.570791
|
Orthologs for LAP3
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for LAP3 gene from 5/20 species (see all 20
)
About this table Species with no ortholog for LAP3
ENSEMBL Gene Tree for LAP3 | Paralogs for LAP3(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for LAP3 gene
- NPEPL12
Pseudogenes
- 1 related pseudogene
|
SNPs/Variants for LAP3(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for LAP3 (up to first 250kb)
|
Disorders & Mutations for LAP3
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 170250
10/19 Novoseek disease relationships for LAP3 gene (see all 19
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| bacterial vaginosis |
59.36 |
13 |
1892204 (4), 18475340 (2), 18476142 (2), 2277372 (1) (see all 8) |
| cholestasis |
39.52 |
7 |
8095735 (2), 1363829 (1), 16137667 (1) |
| albuminuria |
29.60 |
4 |
7869656 (1), 7770643 (1), 8287643 (1), 7987655 (1) |
| diabetic nephropathies |
23.88 |
3 |
1685160 (2) |
| proteinuria |
22.35 |
6 |
7869656 (1), 8287643 (1), 7987655 (1), 8314287 (1) |
| choriocarcinoma |
11.94 |
1 |
1786199 (1) |
| prostate carcinoma |
8.78 |
3 |
1712242 (2), 7690169 (1) |
| benign prostatic hyperplasia |
5.38 |
2 |
1712242 (2) |
| endometrial carcinoma |
0.55 |
2 |
14695154 (1), 15741767 (1) |
| shock |
0.00 |
6 |
9061419 (2), 8558037 (1) |
About this table
|
Medical News for LAP3(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for LAP3 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/212 PubMed articles for LAP3 gene (see all 212
):- Structural and immunological evidence for the identity of prolyl aminopeptidase with leucyl aminopeptidase. (PubMed id 1908238)1, 3, 4 Matsushima M....Takahashi K. (1991)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Suggested assignment of peptidase S (PEPS) to 4p11-4q12 by exclusion using gene dosage, accounting for variability in fibroblasts. (PubMed id 6350155)2, 3 Schmutz S.M. and Simpson N.E. (1983)
- Assignment of peptidase S (PEPS) to chromosome 4 in man using somatic cell hybrids. (PubMed id 689684)2, 3 Shows T.B....Goggin A.P. (1978)
- Reduced activity of the hypertension-associated Lys528Arg mutant of human adipocyte-derived leucine aminopeptidase (A-LAP)/ER-aminopeptidase-1. (PubMed id 16513116)1, 3 Goto Y....Tsujimoto M. (2006)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)3 Ota T....Sugano S. (2004)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)3 Strausberg R.L....Marra M.A. (2002)
- Hepatitis C virus core protein interacts with 14-3-3 protein and activates the kinase Raf-1. (PubMed id )4 Aoki H.... Hino O. (2000)
- Construction and characterization of a full length-enriched and a 5'- end-enriched cDNA library. (PubMed id 9373149)3 Suzuki Y.... Sugano S. (1997)
- Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. (PubMed id 8125298)3 Maruyama K. and Sugano S. (1994)
|
Search for LAP3
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing LAP3
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing LAP3
(According to HUGE)
About This Section
| -- |
Specialized Databases showing LAP3(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for LAP3(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for LAP3:

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