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Aliases for LAMC1-AS1 Gene

Subcategory (RNA class) for LAMC1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LAMC1-AS1 Gene

  • LAMC1 Antisense RNA 1 2 3
  • Lnc-LAMC2-1:1 3
  • AL354953.1 5

External Ids for LAMC1-AS1 Gene

Summaries for LAMC1-AS1 Gene

GeneCards Summary for LAMC1-AS1 Gene

LAMC1-AS1 (LAMC1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LAMC1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LAMC1-AS1 Gene

Genomics for LAMC1-AS1 Gene

Regulatory Elements for LAMC1-AS1 Gene

Enhancers for LAMC1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H183469 1.5 ENCODE dbSUPER 75.1 -330.5 -330527 4.2 MLX FEZF1 DMAP1 YY1 ZNF416 ZNF143 ZNF548 SP3 NFYC ZC3H11A DHX9 LAMC1-AS1 HMGN1P4 SMG7 LAMC1 SMG7-AS1 ENSG00000227554 KRT18P28 LOC100271717 RNA5SP71
GH01H183021 1.4 ENCODE dbSUPER 40.8 +116.6 116584 7 HDGF PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 LAMC1-AS1 DHX9 LAMC1 HMGN1P4 KRT18P28 LOC100271717 RNA5SP71 LINC01688 TEDDM2P ENSG00000232309
GH01H183043 1.4 Ensembl ENCODE dbSUPER 32.1 +96.8 96754 2.8 PKNOX1 FOXA2 NFIB INSM2 ZNF195 FEZF1 RAD21 YY1 ZSCAN5C SCRT2 DHX9 LAMC1-AS1 LAMC1
GH01H183028 1.8 FANTOM5 Ensembl ENCODE dbSUPER 21.5 +111.4 111367 2.7 FOXA2 MLX ARID4B DMAP1 BRCA1 SLC30A9 FOS ATF7 SP3 SP5 LAMC1-AS1 LAMC1 RNU6-41P
GH01H183093 1.4 Ensembl ENCODE dbSUPER 26.3 +47.3 47306 1.5 TBP ZSCAN4 SIN3A RAD21 RFX5 FOS RCOR1 DEK YY2 USF2 LAMC1-AS1 LAMC1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LAMC1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LAMC1-AS1 Gene

Genomic Locations for LAMC1-AS1 Gene
chr1:183,138,402-183,141,282
(GRCh38/hg38)
Size:
2,881 bases
Orientation:
Minus strand
chr1:183,107,537-183,110,417
(GRCh37/hg19)

Genomic View for LAMC1-AS1 Gene

Genes around LAMC1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LAMC1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LAMC1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for LAMC1-AS1 Gene

Proteins for LAMC1-AS1 Gene

Post-translational modifications for LAMC1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LAMC1-AS1 Gene

Domains & Families for LAMC1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LAMC1-AS1 Gene

Function for LAMC1-AS1 Gene

Phenotypes From GWAS Catalog for LAMC1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LAMC1-AS1 Gene

Localization for LAMC1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LAMC1-AS1 Gene

Pathways & Interactions for LAMC1-AS1 Gene

SuperPathways for LAMC1-AS1 Gene

No Data Available

Interacting Proteins for LAMC1-AS1 Gene

Gene Ontology (GO) - Biological Process for LAMC1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LAMC1-AS1 Gene

Drugs & Compounds for LAMC1-AS1 Gene

No Compound Related Data Available

Transcripts for LAMC1-AS1 Gene

mRNA/cDNA for LAMC1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LAMC1-AS1 Gene

No ASD Table

Relevant External Links for LAMC1-AS1 Gene

GeneLoc Exon Structure for
LAMC1-AS1
ECgene alternative splicing isoforms for
LAMC1-AS1

Expression for LAMC1-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LAMC1-AS1 Gene

Orthologs for LAMC1-AS1 Gene

Evolution for LAMC1-AS1 Gene

ENSEMBL:
Gene Tree for LAMC1-AS1 (if available)
TreeFam:
Gene Tree for LAMC1-AS1 (if available)

No data available for Orthologs for LAMC1-AS1 Gene

Paralogs for LAMC1-AS1 Gene

No data available for Paralogs for LAMC1-AS1 Gene

Variants for LAMC1-AS1 Gene

Relevant External Links for LAMC1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LAMC1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LAMC1-AS1 Gene

Disorders for LAMC1-AS1 Gene

No disorders were found for LAMC1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LAMC1-AS1 Gene

Publications for LAMC1-AS1 Gene

  1. A functional polymorphism in lnc-LAMC2-1:1 confers risk of colorectal cancer by affecting miRNA binding. (PMID: 26905585) Gong J … Miao X (Carcinogenesis 2016) 2 3 60

Products for LAMC1-AS1 Gene

Sources for LAMC1-AS1 Gene

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