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Aliases for KU-MEL-3 Gene

Subcategory (RNA class) for KU-MEL-3 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for KU-MEL-3 Gene

  • Uncharacterized LOC497048 3

External Ids for KU-MEL-3 Gene

ORGUL Members for KU-MEL-3 Gene

Previous GeneCards Identifiers for KU-MEL-3 Gene

  • GC00U921513
  • GC06U900792
  • GC06P004555

Summaries for KU-MEL-3 Gene

GeneCards Summary for KU-MEL-3 Gene

KU-MEL-3 (Uncharacterized LOC497048) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KU-MEL-3 Gene

Genomics for KU-MEL-3 Gene

Regulatory Elements for KU-MEL-3 Gene

Genomic Location for KU-MEL-3 Gene

Start:
4,610,656 bp from pter
End:
4,611,304 bp from pter
Size:
649 bases
Orientation:
Plus strand

Genomic View for KU-MEL-3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KU-MEL-3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KU-MEL-3 Gene

Proteins for KU-MEL-3 Gene

  • Protein details for KU-MEL-3 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q5G014
    Recommended name:
    KU-MEL-3
    Protein Accession:
    Q5G014
    Secondary Accessions:

    Protein attributes for KU-MEL-3 Gene

    Size:
    58 amino acids
    Molecular mass:
    6160 Da
    Quaternary structure:
    No Data Available

neXtProt entry for KU-MEL-3 Gene

Proteomics data for KU-MEL-3 Gene at MOPED

Post-translational modifications for KU-MEL-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KU-MEL-3 Gene

Domains for KU-MEL-3 Gene

Protein Domains for KU-MEL-3 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for KU-MEL-3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KU-MEL-3: view

No data available for Gene Families and UniProtKB/Swiss-Prot for KU-MEL-3 Gene

Function for KU-MEL-3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for KU-MEL-3 Gene

Localization for KU-MEL-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KU-MEL-3 Gene

Pathways for KU-MEL-3 Gene

SuperPathways for KU-MEL-3 Gene

No Data Available

Interacting Proteins for KU-MEL-3 Gene

Gene Ontology (GO) - Biological Process for KU-MEL-3 Gene

None

No data available for Pathways by source for KU-MEL-3 Gene

Transcripts for KU-MEL-3 Gene

mRNA/cDNA for KU-MEL-3 Gene

(6) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KU-MEL-3 Gene

KU-MEL-3:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for KU-MEL-3

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for KU-MEL-3 Gene

No ASD Table

Relevant External Links for KU-MEL-3 Gene

GeneLoc Exon Structure for
KU-MEL-3

Expression for KU-MEL-3 Gene

mRNA expression in normal human tissues for KU-MEL-3 Gene

mRNA differential expression in normal tissues according to GTEx for KU-MEL-3 Gene

This gene is overexpressed in Cervix - Ectocervix (11.0), Uterus (7.7), Skin - Not Sun Exposed (Suprapubic) (5.4), Skin - Sun Exposed (Lower leg) (4.4), and Vagina (4.0).

SOURCE GeneReport for Unigene cluster for KU-MEL-3 Gene Hs.591355

genes like me logo Genes that share expressions with KU-MEL-3: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for KU-MEL-3 Gene

Orthologs for KU-MEL-3 Gene

Evolution for KU-MEL-3 Gene

ENSEMBL:
Gene Tree for KU-MEL-3 (if available)
TreeFam:
Gene Tree for KU-MEL-3 (if available)

No data available for Orthologs for KU-MEL-3 Gene

Paralogs for KU-MEL-3 Gene

No data available for Paralogs for KU-MEL-3 Gene

Variants for KU-MEL-3 Gene

Sequence variations from dbSNP and Humsavar for KU-MEL-3 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs926587 -- 4,610,860(+) GTGAC(A/T)GGTGT intron-variant
rs981281 -- 4,612,122(+) cGTTG(C/T)TTAAC downstream-variant-500B
rs1319361 -- 4,612,176(+) TGTTA(A/G)AAGTG downstream-variant-500B
rs1883659 -- 4,610,675(+) CATCA(A/G)AAGTT nc-transcript-variant
rs2064335 -- 4,609,501(+) ggatg(A/G)aaaga upstream-variant-2KB

Relevant External Links for KU-MEL-3 Gene

HapMap Linkage Disequilibrium report
KU-MEL-3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for KU-MEL-3 Gene

Disorders for KU-MEL-3 Gene

Relevant External Links for KU-MEL-3

Genetic Association Database (GAD)
KU-MEL-3
genes like me logo Genes that share disorders with KU-MEL-3: view

No data available for UniProtKB/Swiss-Prot for KU-MEL-3 Gene

Publications for KU-MEL-3 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Systematic identification of human melanoma antigens using serial analysis of gene expression (SAGE). (PMID: 15614040) Matsuzaki Y. … Kawakami Y. (J. Immunother. 2005) 3
  3. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs J.B. … Dupuis J. (BMC Med. Genet. 2007) 48
  4. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 48
  5. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 48

Products for KU-MEL-3 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate KU-MEL-3
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for KU-MEL-3
    • Block miRNA regulation of KU-MEL-3 using miScript Target Protectors

    Sources for KU-MEL-3 Gene

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