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Aliases for KU-MEL-3 Gene

Subcategory (RNA class) for KU-MEL-3 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for KU-MEL-3 Gene

  • Uncharacterized LOC497048 3
  • AL034376.1 5

External Ids for KU-MEL-3 Gene

Previous GeneCards Identifiers for KU-MEL-3 Gene

  • GC00U921513
  • GC06U900792
  • GC06P004555

Summaries for KU-MEL-3 Gene

GeneCards Summary for KU-MEL-3 Gene

KU-MEL-3 (Uncharacterized LOC497048) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for KU-MEL-3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KU-MEL-3 Gene

Genomics for KU-MEL-3 Gene

Regulatory Elements for KU-MEL-3 Gene

Enhancers for KU-MEL-3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H004605 1 Ensembl ENCODE 10.5 -2.9 -2943 3.8 JUN FOSL1 CTBP1 GATA3 POLR2A SCRT2 FOSL2 FOS TCF7L2 SMARCE1 KU-MEL-3 ENSG00000260673
GH06H004602 1.1 FANTOM5 Ensembl ENCODE 9.1 -7.1 -7070 2.2 FOSL1 L3MBTL2 IKZF1 NR4A1 ZNF512 ZIC2 ENSG00000260673 KU-MEL-3 CDYL
GH06H004610 0.2 ENCODE 10.3 -0.1 -128 0.8 KU-MEL-3 ENSG00000260673
GH06H004612 0.8 ENCODE 0.7 +2.2 2227 0 HDAC1 PKNOX1 TBL1XR1 TAL1 CEBPG ZNF316 GATA2 NCOR1 ZSCAN29 NFE2 KU-MEL-3 PIR31801
GH06H004621 1 ENCODE 0.4 +10.2 10217 0.2 PKNOX1 ATF1 ARNT TCF12 ZNF766 GATA2 ELK1 ATF7 NCOA1 MEF2D KU-MEL-3 PIR31801
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KU-MEL-3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KU-MEL-3 Gene

Genomic Locations for KU-MEL-3 Gene
chr6:4,610,565-4,611,919
(GRCh38/hg38)
Size:
1,355 bases
Orientation:
Plus strand
chr6:4,610,846-4,612,153
(GRCh37/hg19)

Genomic View for KU-MEL-3 Gene

Genes around KU-MEL-3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KU-MEL-3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KU-MEL-3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KU-MEL-3 Gene

Proteins for KU-MEL-3 Gene

  • Protein details for KU-MEL-3 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q5G014
    Recommended name:
    KU-MEL-3
    Protein Accession:
    Q5G014

    Protein attributes for KU-MEL-3 Gene

    Size:
    58 amino acids
    Molecular mass:
    6160 Da
    Quaternary structure:
    No Data Available

neXtProt entry for KU-MEL-3 Gene

Post-translational modifications for KU-MEL-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KU-MEL-3 Gene

Domains & Families for KU-MEL-3 Gene

Protein Domains for KU-MEL-3 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for KU-MEL-3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KU-MEL-3: view

No data available for Gene Families and UniProtKB/Swiss-Prot for KU-MEL-3 Gene

Function for KU-MEL-3 Gene

Phenotypes From GWAS Catalog for KU-MEL-3 Gene

Phenotypes for KU-MEL-3 Gene

GenomeRNAi human phenotypes for KU-MEL-3:
genes like me logo Genes that share phenotypes with KU-MEL-3: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KU-MEL-3 Gene

Localization for KU-MEL-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KU-MEL-3 Gene

Pathways & Interactions for KU-MEL-3 Gene

SuperPathways for KU-MEL-3 Gene

No Data Available

Interacting Proteins for KU-MEL-3 Gene

Gene Ontology (GO) - Biological Process for KU-MEL-3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KU-MEL-3 Gene

Drugs & Compounds for KU-MEL-3 Gene

No Compound Related Data Available

Transcripts for KU-MEL-3 Gene

mRNA/cDNA for KU-MEL-3 Gene

(1) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KU-MEL-3 Gene

KU-MEL-3:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KU-MEL-3 Gene

No ASD Table

Relevant External Links for KU-MEL-3 Gene

GeneLoc Exon Structure for
KU-MEL-3

Expression for KU-MEL-3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KU-MEL-3 Gene

mRNA differential expression in normal tissues according to GTEx for KU-MEL-3 Gene

This gene is overexpressed in Cervix - Ectocervix (x11.0), Uterus (x7.7), Skin - Not Sun Exposed (Suprapubic) (x5.4), Skin - Sun Exposed (Lower leg) (x4.4), and Vagina (x4.0).

SOURCE GeneReport for Unigene cluster for KU-MEL-3 Gene:

Hs.591355
genes like me logo Genes that share expression patterns with KU-MEL-3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KU-MEL-3 Gene

Orthologs for KU-MEL-3 Gene

Evolution for KU-MEL-3 Gene

ENSEMBL:
Gene Tree for KU-MEL-3 (if available)
TreeFam:
Gene Tree for KU-MEL-3 (if available)

No data available for Orthologs for KU-MEL-3 Gene

Paralogs for KU-MEL-3 Gene

No data available for Paralogs for KU-MEL-3 Gene

Variants for KU-MEL-3 Gene

Sequence variations from dbSNP and Humsavar for KU-MEL-3 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1000362123 -- 4,611,376(+) CCCAT(A/G)GTGAG nc-transcript-variant
rs1001765354 -- 4,610,170(+) TCACG(C/G)TTGTT upstream-variant-2KB
rs1001846122 -- 4,609,473(+) TTAAC(A/G)TGTAC upstream-variant-2KB
rs1003787690 -- 4,610,751(+) TGCCA(A/G)TGCTT nc-transcript-variant
rs1003995571 -- 4,608,626(+) CCCCC(C/T)TGTTC upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for KU-MEL-3 Gene

Disorders for KU-MEL-3 Gene

Relevant External Links for KU-MEL-3

Genetic Association Database (GAD)
KU-MEL-3
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KU-MEL-3

No disorders were found for KU-MEL-3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KU-MEL-3 Gene

Publications for KU-MEL-3 Gene

  1. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie AG … Butte NF (PloS one 2012) 3 60
  2. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs JB … Dupuis J (BMC medical genetics 2007) 45 60
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 45 60
  4. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 45 60
  5. Systematic identification of human melanoma antigens using serial analysis of gene expression (SAGE). (PMID: 15614040) Matsuzaki Y … Kawakami Y (Journal of immunotherapy (Hagerstown, Md. : 1997) 2005) 3 60

Products for KU-MEL-3 Gene

Sources for KU-MEL-3 Gene

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