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Aliases for KU-MEL-3 Gene

Subcategory (RNA class) for KU-MEL-3 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for KU-MEL-3 Gene

  • Uncharacterized LOC497048 3
  • AL034376.1 5

External Ids for KU-MEL-3 Gene

Previous GeneCards Identifiers for KU-MEL-3 Gene

  • GC00U921513
  • GC06U900792
  • GC06P004555

Summaries for KU-MEL-3 Gene

GeneCards Summary for KU-MEL-3 Gene

KU-MEL-3 (Uncharacterized LOC497048) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for KU-MEL-3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KU-MEL-3 Gene

Genomics for KU-MEL-3 Gene

GeneHancer (GH) Regulatory Elements for KU-MEL-3 Gene

Promoters and enhancers for KU-MEL-3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I004610 Enhancer 0.2 ENCODE 560.4 -0.1 -127 0.8 KU-MEL-3 ENSG00000260673 GC06P004491
GH06I004605 Enhancer 0.9 Ensembl ENCODE 10.5 -2.9 -2943 3.8 JUN NEUROD1 FOSL1 CTBP1 GATA3 POLR2A SCRT2 FOSL2 FOS TCF7L2 KU-MEL-3 ENSG00000260673 GC06P004491
GH06I004602 Enhancer 1 FANTOM5 Ensembl ENCODE 9.1 -7.1 -7069 2.2 FOSL1 ATF4 L3MBTL2 IKZF1 ZNF512 NR4A1 ZIC2 ENSG00000260673 KU-MEL-3 CDYL GC06P004491
GH06I004612 Enhancer 0.7 ENCODE 0.8 +2.2 2227 0 HDAC1 MEIS2 PKNOX1 TAL1 CEBPG ZNF316 NCOR1 ZSCAN29 NFE2 TRIM24 KU-MEL-3 PIR31801 GC06P004491
GH06I004620 Enhancer 0.9 ENCODE 0.4 +9.9 9917 0.2 HDAC1 PKNOX1 ATF1 ARNT NFXL1 ZBTB40 CHAMP1 TCF12 ZNF766 ZBTB11 KU-MEL-3 PIR31801 GC06P004491
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around KU-MEL-3 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the KU-MEL-3 gene promoter:

Genomic Locations for KU-MEL-3 Gene

Genomic Locations for KU-MEL-3 Gene
chr6:4,610,565-4,611,919
(GRCh38/hg38)
Size:
1,355 bases
Orientation:
Plus strand
chr6:4,610,846-4,612,153
(GRCh37/hg19)

Genomic View for KU-MEL-3 Gene

Genes around KU-MEL-3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KU-MEL-3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KU-MEL-3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KU-MEL-3 Gene

Proteins for KU-MEL-3 Gene

  • Protein details for KU-MEL-3 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q5G014
    Recommended name:
    KU-MEL-3
    Protein Accession:
    Q5G014

    Protein attributes for KU-MEL-3 Gene

    Size:
    58 amino acids
    Molecular mass:
    6160 Da
    Quaternary structure:
    No Data Available

neXtProt entry for KU-MEL-3 Gene

Post-translational modifications for KU-MEL-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KU-MEL-3 Gene

Domains & Families for KU-MEL-3 Gene

Protein Domains for KU-MEL-3 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for KU-MEL-3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KU-MEL-3: view

No data available for Gene Families and UniProtKB/Swiss-Prot for KU-MEL-3 Gene

Function for KU-MEL-3 Gene

Phenotypes From GWAS Catalog for KU-MEL-3 Gene

Phenotypes for KU-MEL-3 Gene

GenomeRNAi human phenotypes for KU-MEL-3:
genes like me logo Genes that share phenotypes with KU-MEL-3: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KU-MEL-3 Gene

Localization for KU-MEL-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KU-MEL-3 Gene

Pathways & Interactions for KU-MEL-3 Gene

SuperPathways for KU-MEL-3 Gene

No Data Available

Interacting Proteins for KU-MEL-3 Gene

Gene Ontology (GO) - Biological Process for KU-MEL-3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KU-MEL-3 Gene

Drugs & Compounds for KU-MEL-3 Gene

No Compound Related Data Available

Transcripts for KU-MEL-3 Gene

mRNA/cDNA for KU-MEL-3 Gene

(1) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KU-MEL-3 Gene

KU-MEL-3:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KU-MEL-3 Gene

No ASD Table

Relevant External Links for KU-MEL-3 Gene

GeneLoc Exon Structure for
KU-MEL-3

Expression for KU-MEL-3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KU-MEL-3 Gene

mRNA differential expression in normal tissues according to GTEx for KU-MEL-3 Gene

This gene is overexpressed in Cervix - Ectocervix (x11.0), Uterus (x7.7), Skin - Not Sun Exposed (Suprapubic) (x5.4), Skin - Sun Exposed (Lower leg) (x4.4), and Vagina (x4.0).

SOURCE GeneReport for Unigene cluster for KU-MEL-3 Gene:

Hs.591355
genes like me logo Genes that share expression patterns with KU-MEL-3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KU-MEL-3 Gene

Orthologs for KU-MEL-3 Gene

Evolution for KU-MEL-3 Gene

ENSEMBL:
Gene Tree for KU-MEL-3 (if available)
TreeFam:
Gene Tree for KU-MEL-3 (if available)

No data available for Orthologs for KU-MEL-3 Gene

Paralogs for KU-MEL-3 Gene

No data available for Paralogs for KU-MEL-3 Gene

Variants for KU-MEL-3 Gene

Sequence variations from dbSNP and Humsavar for KU-MEL-3 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000362123 -- 4,611,376(+) A/G non_coding_transcript_variant
rs1001765354 -- 4,610,170(+) G/C upstream_transcript_variant
rs1001846122 -- 4,609,473(+) G/A upstream_transcript_variant
rs1003787690 -- 4,610,751(+) A/G non_coding_transcript_variant
rs1003995571 -- 4,608,626(+) T/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for KU-MEL-3 Gene

Disorders for KU-MEL-3 Gene

Additional Disease Information for KU-MEL-3

No disorders were found for KU-MEL-3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KU-MEL-3 Gene

Publications for KU-MEL-3 Gene

  1. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie AG … Butte NF (PloS one 2012) 3 58
  2. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs JB … Dupuis J (BMC medical genetics 2007) 44 58
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 44 58
  4. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 44 58
  5. Systematic identification of human melanoma antigens using serial analysis of gene expression (SAGE). (PMID: 15614040) Matsuzaki Y … Kawakami Y (Journal of immunotherapy (Hagerstown, Md. : 1997) 2005) 3 58

Products for KU-MEL-3 Gene

Sources for KU-MEL-3 Gene

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