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Aliases for KTN1-AS1 Gene

Subcategory (RNA class) for KTN1-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for KTN1-AS1 Gene

  • KTN1 Antisense RNA 1 2 3 4
  • KTN1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • C14orf33 3 4
  • Chromosome 14 Open Reading Frame 33 2
  • KTN1 Antisense Gene Protein 1 4

External Ids for KTN1-AS1 Gene

ORGUL Members for KTN1-AS1 Gene

Previous HGNC Symbols for KTN1-AS1 Gene

  • C14orf33

Previous GeneCards Identifiers for KTN1-AS1 Gene

  • GC14M055965

Summaries for KTN1-AS1 Gene

GeneCards Summary for KTN1-AS1 Gene

KTN1-AS1 (KTN1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KTN1-AS1 Gene

Genomics for KTN1-AS1 Gene

Genomic Location for KTN1-AS1 Gene

Start:
55,499,278 bp from pter
End:
55,580,110 bp from pter
Size:
80,833 bases
Orientation:
Minus strand

Genomic View for KTN1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KTN1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KTN1-AS1 Gene

No data available for Regulatory Elements for KTN1-AS1 Gene

Proteins for KTN1-AS1 Gene

  • Protein details for KTN1-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q86SY8-KTAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein KTN1-AS1
    Protein Accession:
    Q86SY8
    Secondary Accessions:

    Protein attributes for KTN1-AS1 Gene

    Size:
    53 amino acids
    Molecular mass:
    5770 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=CAD62624.1; Type=Erroneous initiation; Evidence={ECO:0000305};

neXtProt entry for KTN1-AS1 Gene

Proteomics data for KTN1-AS1 Gene at MOPED

Post-translational modifications for KTN1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KTN1-AS1 Gene

Domains for KTN1-AS1 Gene

Gene Families for KTN1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for KTN1-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KTN1-AS1: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KTN1-AS1 Gene

Function for KTN1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for KTN1-AS1 Gene

Localization for KTN1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KTN1-AS1 Gene

Pathways for KTN1-AS1 Gene

SuperPathways for KTN1-AS1 Gene

No Data Available

Interacting Proteins for KTN1-AS1 Gene

Gene Ontology (GO) - Biological Process for KTN1-AS1 Gene

None

No data available for Pathways by source for KTN1-AS1 Gene

Transcripts for KTN1-AS1 Gene

mRNA/cDNA for KTN1-AS1 Gene

(4) Additional mRNA sequences :
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KTN1-AS1 Gene

KTN1 antisense RNA 1:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for KTN1-AS1

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for KTN1-AS1 Gene

No ASD Table

Relevant External Links for KTN1-AS1 Gene

GeneLoc Exon Structure for
KTN1-AS1
ECgene alternative splicing isoforms for
KTN1-AS1

Expression for KTN1-AS1 Gene

mRNA expression in normal human tissues for KTN1-AS1 Gene

SOURCE GeneReport for Unigene cluster for KTN1-AS1 Gene Hs.633724

genes like me logo Genes that share expressions with KTN1-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for KTN1-AS1 Gene

Orthologs for KTN1-AS1 Gene

Evolution for KTN1-AS1 Gene

ENSEMBL:
Gene Tree for KTN1-AS1 (if available)
TreeFam:
Gene Tree for KTN1-AS1 (if available)

No data available for Orthologs for KTN1-AS1 Gene

Paralogs for KTN1-AS1 Gene

No data available for Paralogs for KTN1-AS1 Gene

Variants for KTN1-AS1 Gene

Sequence variations from dbSNP and Humsavar for KTN1-AS1 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs10142739 -- 55,577,343(+) TCCAG(C/T)TGCTT nc-transcript-variant
rs12100749 -- 55,576,217(+) GTCAA(C/T)ATGGT nc-transcript-variant
rs12100753 -- 55,576,152(+) AAATT(A/G)CGTAT downstream-variant-500B
rs12435270 -- 55,578,197(+) CCAAA(C/G)TGCTG intron-variant
rs33966886 -- 55,575,938(+) AAAAA(-/A)TCACA downstream-variant-500B

Relevant External Links for KTN1-AS1 Gene

HapMap Linkage Disequilibrium report
KTN1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for KTN1-AS1 Gene

Disorders for KTN1-AS1 Gene

No disorders were found for KTN1-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for KTN1-AS1 Gene

Publications for KTN1-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for KTN1-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate KTN1-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for KTN1-AS1
    • Block miRNA regulation of KTN1-AS1 using miScript Target Protectors

    Sources for KTN1-AS1 Gene

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