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Aliases for KTN1-AS1 Gene

Subcategory (RNA class) for KTN1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for KTN1-AS1 Gene

  • KTN1 Antisense RNA 1 2 3 4 5
  • KTN1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • C14orf33 3 4
  • Chromosome 14 Open Reading Frame 33 2
  • KTN1 Antisense Gene Protein 1 4
  • MYCLo-3 3

External Ids for KTN1-AS1 Gene

Previous HGNC Symbols for KTN1-AS1 Gene

  • C14orf33

Previous GeneCards Identifiers for KTN1-AS1 Gene

  • GC14M055965

Summaries for KTN1-AS1 Gene

GeneCards Summary for KTN1-AS1 Gene

KTN1-AS1 (KTN1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for KTN1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KTN1-AS1 Gene

Genomics for KTN1-AS1 Gene

Regulatory Elements for KTN1-AS1 Gene

Enhancers for KTN1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14H055578 1.9 FANTOM5 Ensembl ENCODE dbSUPER 28.3 -1.5 -1462 6.7 HDGF PKNOX1 FOXA2 ARID4B SIN3A DMAP1 YY1 ZNF143 ZNF207 MXD4 KTN1-AS1 ATG14 KTN1 MAPK1IP1L TBPL2 GC14P055652
GH14H055598 1.6 Ensembl ENCODE dbSUPER 24.8 -20.3 -20320 3.7 FOXA2 ARID4B SIN3A DMAP1 ZNF2 YY1 FOS DEK SP5 ZHX2 KTN1-AS1 ATG14 WDHD1 ENSG00000259318 KTN1 TBPL2 SOCS4 GC14P055652
GH14H055605 1 ENCODE dbSUPER 25 -25.9 -25852 1.2 SOX13 PKNOX1 FOXA2 ZNF384 TEAD3 CTBP1 GATA3 NR2F6 HOMEZ TCF7L2 KTN1-AS1 KTN1 GC14P055652
GH14H055608 0.9 Ensembl ENCODE dbSUPER 26.2 -29.4 -29437 1.7 JUND JUN KTN1-AS1 KTN1 TBPL2 GC14P055652
GH14H055556 1 Ensembl ENCODE 20.4 +22.9 22920 1.3 PKNOX1 NFIB MAX SIN3A CTBP1 GATA3 POLR2A FOS RCOR1 MAZ KTN1-AS1 TBPL2 KTN1 GC14M055549
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KTN1-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for KTN1-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000068854 -190 2601 HDGF ARID4B SIN3A DMAP1 GLI4 YY1 TCF12 GTF3C2 GLIS2 ZNF143

Genomic Locations for KTN1-AS1 Gene

Genomic Locations for KTN1-AS1 Gene
80,833 bases
Minus strand

Genomic View for KTN1-AS1 Gene

Genes around KTN1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KTN1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KTN1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KTN1-AS1 Gene

Proteins for KTN1-AS1 Gene

  • Protein details for KTN1-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein KTN1-AS1
    Protein Accession:

    Protein attributes for KTN1-AS1 Gene

    53 amino acids
    Molecular mass:
    5770 Da
    Quaternary structure:
    No Data Available
    • Sequence=CAD62624.1; Type=Erroneous initiation; Evidence={ECO:0000305};

neXtProt entry for KTN1-AS1 Gene

Post-translational modifications for KTN1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KTN1-AS1 Gene

Domains & Families for KTN1-AS1 Gene

Protein Domains for KTN1-AS1 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KTN1-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KTN1-AS1 Gene

Function for KTN1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KTN1-AS1 Gene

Localization for KTN1-AS1 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for KTN1-AS1 gene
Compartment Confidence
extracellular 2
nucleus 2
cytosol 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KTN1-AS1 Gene

Pathways & Interactions for KTN1-AS1 Gene

SuperPathways for KTN1-AS1 Gene

No Data Available

Interacting Proteins for KTN1-AS1 Gene

Gene Ontology (GO) - Biological Process for KTN1-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for KTN1-AS1 Gene

Drugs & Compounds for KTN1-AS1 Gene

No Compound Related Data Available

Transcripts for KTN1-AS1 Gene

mRNA/cDNA for KTN1-AS1 Gene

(4) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KTN1-AS1 Gene

KTN1 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KTN1-AS1 Gene

No ASD Table

Relevant External Links for KTN1-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for KTN1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KTN1-AS1 Gene

SOURCE GeneReport for Unigene cluster for KTN1-AS1 Gene:

genes like me logo Genes that share expression patterns with KTN1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KTN1-AS1 Gene

Orthologs for KTN1-AS1 Gene

Evolution for KTN1-AS1 Gene

Gene Tree for KTN1-AS1 (if available)
Gene Tree for KTN1-AS1 (if available)

No data available for Orthologs for KTN1-AS1 Gene

Paralogs for KTN1-AS1 Gene

No data available for Paralogs for KTN1-AS1 Gene

Variants for KTN1-AS1 Gene

Sequence variations from dbSNP and Humsavar for KTN1-AS1 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs1000064841 -- 55,578,677(+) AGATA(A/G)CCAGT nc-transcript-variant, upstream-variant-2KB
rs1000284606 -- 55,578,324(+) AGTTC(A/G)AACGC intron-variant, upstream-variant-2KB
rs1000635322 -- 55,577,256(+) ATAGC(G/T)AATGA nc-transcript-variant
rs1000994726 -- 55,579,589(+) TTTTG(A/G)CAGAG intron-variant, upstream-variant-2KB
rs1001130247 -- 55,579,428(+) ACGGA(C/G)AGTCT intron-variant, upstream-variant-2KB

Relevant External Links for KTN1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KTN1-AS1 Gene

Disorders for KTN1-AS1 Gene

Relevant External Links for KTN1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for KTN1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KTN1-AS1 Gene

Publications for KTN1-AS1 Gene

  1. Role of MYC-regulated long noncoding RNAs in cell cycle regulation and tumorigenesis. (PMID: 25663692) Kim T … Croce CM (Journal of the National Cancer Institute 2015) 2 3 60
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60

Products for KTN1-AS1 Gene

Sources for KTN1-AS1 Gene

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