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Aliases for KRTAP7-1 Gene

Aliases for KRTAP7-1 Gene

  • Keratin Associated Protein 7-1 (Gene/Pseudogene) 2 3
  • High Tyrosine-Glycine Keratin-Associated Protein 7.1 3 4
  • KAP7.1 3 4
  • Keratin Associated Protein 7-1 2
  • KRTAP7.1 4

External Ids for KRTAP7-1 Gene

Previous GeneCards Identifiers for KRTAP7-1 Gene

  • GC21U900010
  • GC21M031122
  • GC21M032201
  • GC21M017610

Summaries for KRTAP7-1 Gene

GeneCards Summary for KRTAP7-1 Gene

KRTAP7-1 (Keratin Associated Protein 7-1 (Gene/Pseudogene)) is a Protein Coding gene.

UniProtKB/Swiss-Prot for KRTAP7-1 Gene

  • In the hair cortex, hair keratin intermediate filaments are embedded in an interfilamentous matrix, consisting of hair keratin-associated proteins (KRTAP), which are essential for the formation of a rigid and resistant hair shaft through their extensive disulfide bond cross-linking with abundant cysteine residues of hair keratins. The matrix proteins include the high-sulfur and high-glycine-tyrosine keratins

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRTAP7-1 Gene

Genomics for KRTAP7-1 Gene

Regulatory Elements for KRTAP7-1 Gene

Genomic Location for KRTAP7-1 Gene

Chromosome:
21
Start:
30,829,039 bp from pter
End:
30,829,759 bp from pter
Size:
721 bases
Orientation:
Minus strand

Genomic View for KRTAP7-1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KRTAP7-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRTAP7-1 Gene

Proteins for KRTAP7-1 Gene

  • Protein details for KRTAP7-1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8IUC3-KRA71_HUMAN
    Recommended name:
    Keratin-associated protein 7-1
    Protein Accession:
    Q8IUC3
    Secondary Accessions:
    • Q3LI56

    Protein attributes for KRTAP7-1 Gene

    Size:
    87 amino acids
    Molecular mass:
    9288 Da
    Quaternary structure:
    • Interacts with hair keratins

neXtProt entry for KRTAP7-1 Gene

Proteomics data for KRTAP7-1 Gene at MOPED

Post-translational modifications for KRTAP7-1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for KRTAP7-1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for KRTAP7-1 Gene

Domains & Families for KRTAP7-1 Gene

Gene Families for KRTAP7-1 Gene

Protein Domains for KRTAP7-1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for KRTAP7-1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8IUC3

UniProtKB/Swiss-Prot:

KRA71_HUMAN :
  • Belongs to the KRTAP type 7 family.
Family:
  • Belongs to the KRTAP type 7 family.
genes like me logo Genes that share domains with KRTAP7-1: view

Function for KRTAP7-1 Gene

Molecular function for KRTAP7-1 Gene

UniProtKB/Swiss-Prot Function:
In the hair cortex, hair keratin intermediate filaments are embedded in an interfilamentous matrix, consisting of hair keratin-associated proteins (KRTAP), which are essential for the formation of a rigid and resistant hair shaft through their extensive disulfide bond cross-linking with abundant cysteine residues of hair keratins. The matrix proteins include the high-sulfur and high-glycine-tyrosine keratins

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for KRTAP7-1

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRTAP7-1 Gene

Localization for KRTAP7-1 Gene

Gene Ontology (GO) - Cellular Components for KRTAP7-1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005882 intermediate filament IEA --
genes like me logo Genes that share ontologies with KRTAP7-1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for KRTAP7-1 Gene

Pathways & Interactions for KRTAP7-1 Gene

SuperPathways for KRTAP7-1 Gene

No Data Available

Interacting Proteins for KRTAP7-1 Gene

Gene Ontology (GO) - Biological Process for KRTAP7-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KRTAP7-1 Gene

Drugs & Compounds for KRTAP7-1 Gene

No Compound Related Data Available

Transcripts for KRTAP7-1 Gene

mRNA/cDNA for KRTAP7-1 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for KRTAP7-1

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for KRTAP7-1 Gene

No ASD Table

Relevant External Links for KRTAP7-1 Gene

GeneLoc Exon Structure for
KRTAP7-1
ECgene alternative splicing isoforms for
KRTAP7-1

Expression for KRTAP7-1 Gene

mRNA expression in normal human tissues for KRTAP7-1 Gene

Protein differential expression in normal tissues from HIPED for KRTAP7-1 Gene

This gene is overexpressed in Hair follicle (65.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for KRTAP7-1 Gene



SOURCE GeneReport for Unigene cluster for KRTAP7-1 Gene Hs.407656

mRNA Expression by UniProt/SwissProt for KRTAP7-1 Gene

Q8IUC3-KRA71_HUMAN
Tissue specificity: Expressed in the upper portion of the hair cortex
genes like me logo Genes that share expression patterns with KRTAP7-1: view

Protein tissue co-expression partners for KRTAP7-1 Gene

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA differential expression in normal tissues for KRTAP7-1 Gene

Orthologs for KRTAP7-1 Gene

This gene was present in the common ancestor of mammals.

Orthologs for KRTAP7-1 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia KRTAP7-1 35
  • 88.51 (n)
  • 88.51 (a)
dog
(Canis familiaris)
Mammalia KRTAP7-1 35
  • 88.51 (n)
  • 88.51 (a)
mouse
(Mus musculus)
Mammalia Krtap7-1 35
  • 82.95 (n)
  • 80.23 (a)
Krtap7-1 16
chimpanzee
(Pan troglodytes)
Mammalia KRTAP7-1 35
  • 98.85 (n)
  • 97.7 (a)
rat
(Rattus norvegicus)
Mammalia Krtap7-1 35
  • 82.95 (n)
  • 80.23 (a)
Species with no ortholog for KRTAP7-1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for KRTAP7-1 Gene

ENSEMBL:
Gene Tree for KRTAP7-1 (if available)
TreeFam:
Gene Tree for KRTAP7-1 (if available)

Paralogs for KRTAP7-1 Gene

No data available for Paralogs for KRTAP7-1 Gene

Variants for KRTAP7-1 Gene

Structural Variations from Database of Genomic Variants (DGV) for KRTAP7-1 Gene

Variant ID Type Subtype PubMed ID
nsv459237 CNV Gain 19166990
nsv834077 CNV Gain 17160897

Relevant External Links for KRTAP7-1 Gene

HapMap Linkage Disequilibrium report
KRTAP7-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for KRTAP7-1 Gene

Disorders for KRTAP7-1 Gene

Relevant External Links for KRTAP7-1

Genetic Association Database (GAD)
KRTAP7-1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KRTAP7-1
genes like me logo Genes that share disorders with KRTAP7-1: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KRTAP7-1 Gene

Publications for KRTAP7-1 Gene

  1. Characterization of a first domain of human high glycine-tyrosine and high sulfur keratin-associated protein (KAP) genes on chromosome 21q22.1. (PMID: 12359730) Rogers M.A. … Schweizer J. (J. Biol. Chem. 2002) 2 67
  2. Whole genome association scan for genetic polymorphisms influencing information processing speed. (PMID: 21130836) Luciano M. … Deary I.J. (Biol Psychol 2011) 67
  3. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang Z.D. … Gerstein M. (Genome Biol. 2010) 67
  4. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M. … Yaspo M.-L. (Nature 2000) 67

Products for KRTAP7-1 Gene

Sources for KRTAP7-1 Gene

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