Free for academic non-profit institutions. Other users need a Commercial license

Aliases for KRTAP5-AS1 Gene

Subcategory (RNA class) for KRTAP5-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KRTAP5-AS1 Gene

  • KRTAP5-1/KRTAP5-2 Antisense RNA 1 2 3 5

External Ids for KRTAP5-AS1 Gene

Previous GeneCards Identifiers for KRTAP5-AS1 Gene

  • GC11P001592

Summaries for KRTAP5-AS1 Gene

GeneCards Summary for KRTAP5-AS1 Gene

KRTAP5-AS1 (KRTAP5-1/KRTAP5-2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRTAP5-AS1 Gene

Genomics for KRTAP5-AS1 Gene

Regulatory Elements for KRTAP5-AS1 Gene

Promoters for KRTAP5-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around KRTAP5-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for KRTAP5-AS1 Gene

Chromosome:
11
Start:
1,571,353 bp from pter
End:
1,599,184 bp from pter
Size:
27,832 bases
Orientation:
Plus strand

Genomic View for KRTAP5-AS1 Gene

Genes around KRTAP5-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRTAP5-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRTAP5-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRTAP5-AS1 Gene

Proteins for KRTAP5-AS1 Gene

Post-translational modifications for KRTAP5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRTAP5-AS1 Gene

Domains & Families for KRTAP5-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KRTAP5-AS1 Gene

Function for KRTAP5-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRTAP5-AS1 Gene

Localization for KRTAP5-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KRTAP5-AS1 Gene

Pathways & Interactions for KRTAP5-AS1 Gene

SuperPathways for KRTAP5-AS1 Gene

No Data Available

Interacting Proteins for KRTAP5-AS1 Gene

Gene Ontology (GO) - Biological Process for KRTAP5-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KRTAP5-AS1 Gene

Drugs & Compounds for KRTAP5-AS1 Gene

No Compound Related Data Available

Transcripts for KRTAP5-AS1 Gene

mRNA/cDNA for KRTAP5-AS1 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KRTAP5-AS1 Gene

No ASD Table

Relevant External Links for KRTAP5-AS1 Gene

GeneLoc Exon Structure for
KRTAP5-AS1
ECgene alternative splicing isoforms for
KRTAP5-AS1

Expression for KRTAP5-AS1 Gene

mRNA expression in normal human tissues for KRTAP5-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for KRTAP5-AS1 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x7.8), Brain - Cerebellar Hemisphere (x6.8), and Brain - Cerebellum (x5.2).
genes like me logo Genes that share expression patterns with KRTAP5-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for KRTAP5-AS1 Gene

Orthologs for KRTAP5-AS1 Gene

Evolution for KRTAP5-AS1 Gene

ENSEMBL:
Gene Tree for KRTAP5-AS1 (if available)
TreeFam:
Gene Tree for KRTAP5-AS1 (if available)

No data available for Orthologs for KRTAP5-AS1 Gene

Paralogs for KRTAP5-AS1 Gene

No data available for Paralogs for KRTAP5-AS1 Gene

Variants for KRTAP5-AS1 Gene

Sequence variations from dbSNP and Humsavar for KRTAP5-AS1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1565371 -- 1,578,949(+) GAGAG(G/T)TTCAT intron-variant
rs1565372 -- 1,579,196(+) ctatc(A/G)ttata intron-variant
rs7105132 -- 1,578,637(+) GAGGC(A/G)AGGCT intron-variant
rs7117296 -- 1,578,440(+) CTTTC(A/G)TTTCT intron-variant
rs6578535 -- 1,583,010(+) ctgca(C/G)tccag intron-variant

Relevant External Links for KRTAP5-AS1 Gene

HapMap Linkage Disequilibrium report
KRTAP5-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRTAP5-AS1 Gene

Disorders for KRTAP5-AS1 Gene

Relevant External Links for KRTAP5-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KRTAP5-AS1

No disorders were found for KRTAP5-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KRTAP5-AS1 Gene

Publications for KRTAP5-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for KRTAP5-AS1 Gene

Sources for KRTAP5-AS1 Gene

Back to Top

Content