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Aliases for KRTAP5-AS1 Gene

Subcategory (RNA class) for KRTAP5-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for KRTAP5-AS1 Gene

  • KRTAP5-1/KRTAP5-2 Antisense RNA 1 2 3

External Ids for KRTAP5-AS1 Gene

ORGUL Members for KRTAP5-AS1 Gene

Previous GeneCards Identifiers for KRTAP5-AS1 Gene

  • GC11P001592

Summaries for KRTAP5-AS1 Gene

GeneCards Summary for KRTAP5-AS1 Gene

KRTAP5-AS1 (KRTAP5-1/KRTAP5-2 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRTAP5-AS1 Gene

Genomics for KRTAP5-AS1 Gene

Genomic Location for KRTAP5-AS1 Gene

Start:
1,571,353 bp from pter
End:
1,599,184 bp from pter
Size:
27,832 bases
Orientation:
Plus strand

Genomic View for KRTAP5-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KRTAP5-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRTAP5-AS1 Gene

No data available for Regulatory Elements for KRTAP5-AS1 Gene

Proteins for KRTAP5-AS1 Gene

Post-translational modifications for KRTAP5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRTAP5-AS1 Gene

Domains for KRTAP5-AS1 Gene

Gene Families for KRTAP5-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KRTAP5-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KRTAP5-AS1 Gene

Function for KRTAP5-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for KRTAP5-AS1 Gene

Localization for KRTAP5-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KRTAP5-AS1 Gene

Pathways for KRTAP5-AS1 Gene

SuperPathways for KRTAP5-AS1 Gene

No Data Available

Interacting Proteins for KRTAP5-AS1 Gene

Gene Ontology (GO) - Biological Process for KRTAP5-AS1 Gene

None

No data available for Pathways by source for KRTAP5-AS1 Gene

Transcripts for KRTAP5-AS1 Gene

mRNA/cDNA for KRTAP5-AS1 Gene

(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate KRTAP5-AS1
    • Block miRNA regulation of KRTAP5-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for KRTAP5-AS1

    Primer Products

    • OriGene qSTAR qPCR primer pairs in human,mouse,rat for KRTAP5-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for KRTAP5-AS1 Gene

    No ASD Table

    Relevant External Links for KRTAP5-AS1 Gene

    GeneLoc Exon Structure for
    KRTAP5-AS1
    ECgene alternative splicing isoforms for
    KRTAP5-AS1

    Expression for KRTAP5-AS1 Gene

    mRNA expression in normal human tissues for KRTAP5-AS1 Gene

    mRNA differential expression in normal tissues according to GTEx for KRTAP5-AS1 Gene

    This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (7.8), Brain - Cerebellar Hemisphere (6.8), and Brain - Cerebellum (5.2).
    genes like me logo Genes that share expressions with KRTAP5-AS1: view

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for KRTAP5-AS1 Gene

    Orthologs for KRTAP5-AS1 Gene

    Evolution for KRTAP5-AS1 Gene

    ENSEMBL:
    Gene Tree for KRTAP5-AS1 (if available)
    TreeFam:
    Gene Tree for KRTAP5-AS1 (if available)

    No data available for Orthologs for KRTAP5-AS1 Gene

    Paralogs for KRTAP5-AS1 Gene

    No data available for Paralogs for KRTAP5-AS1 Gene

    Variants for KRTAP5-AS1 Gene

    Sequence variations from dbSNP and Humsavar for KRTAP5-AS1 Gene

    SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
    rs1565371 -- 1,578,949(+) GAGAG(G/T)TTCAT intron-variant
    rs1565372 -- 1,579,196(+) ctatc(A/G)ttata intron-variant
    rs4752737 -- 1,590,724(+) tagta(A/G)agaag intron-variant
    rs6578535 -- 1,583,010(+) ctgca(C/G)tccag intron-variant
    rs6578539 -- 1,589,982(+) agttg(C/T)ccaag intron-variant

    Relevant External Links for KRTAP5-AS1 Gene

    HapMap Linkage Disequilibrium report
    KRTAP5-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for KRTAP5-AS1 Gene

    Disorders for KRTAP5-AS1 Gene

    No disorders were found for KRTAP5-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for KRTAP5-AS1 Gene

    Publications for KRTAP5-AS1 Gene

    1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
    2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

    Products for KRTAP5-AS1 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate KRTAP5-AS1
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for KRTAP5-AS1
      • Block miRNA regulation of KRTAP5-AS1 using miScript Target Protectors

      Sources for KRTAP5-AS1 Gene

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