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Aliases for KRTAP4-16P Gene

Aliases for KRTAP4-16P Gene

  • Keratin Associated Protein 4-16, Pseudogene 2 3
  • Keratin Associated Protein 4 Pseudogene 1 2 3
  • Keratin-Associated Protein 4A Pseudogene 3
  • KRTAP4P1 3
  • KAP4A 3

External Ids for KRTAP4-16P Gene

Previous HGNC Symbols for KRTAP4-16P Gene

  • KRTAP4P1

Previous GeneCards Identifiers for KRTAP4-16P Gene

  • GC17M039258

Summaries for KRTAP4-16P Gene

GeneCards Summary for KRTAP4-16P Gene

KRTAP4-16P (Keratin Associated Protein 4-16, Pseudogene) is a Pseudogene. An important paralog of this gene is KRTAP4-4.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRTAP4-16P Gene

Genomics for KRTAP4-16P Gene

Genomic Location for KRTAP4-16P Gene

Start:
41,101,402 bp from pter
End:
41,102,309 bp from pter
Size:
908 bases
Orientation:
Minus strand

Genomic View for KRTAP4-16P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KRTAP4-16P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRTAP4-16P Gene

No data available for Regulatory Elements for KRTAP4-16P Gene

Proteins for KRTAP4-16P Gene

  • Protein details for KRTAP4-16P Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    G5E9R7
    Recommended name:
    HCG2042993
    Protein Accession:
    G5E9R7
    Secondary Accessions:

    Protein attributes for KRTAP4-16P Gene

    Size:
    235 amino acids
    Molecular mass:
    24569 Da
    Quaternary structure:
    No Data Available

neXtProt entry for KRTAP4-16P Gene

Proteomics data for KRTAP4-16P Gene at MOPED

Post-translational modifications for KRTAP4-16P Gene

No Post-translational modifications

Other Protein References for KRTAP4-16P Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for KRTAP4-16P Gene

Domains for KRTAP4-16P Gene

Gene Families for KRTAP4-16P Gene

HGNC:
  • KRTAP :Keratin associated proteins

Protein Domains for KRTAP4-16P Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KRTAP4-16P: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KRTAP4-16P Gene

Function for KRTAP4-16P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for KRTAP4-16P Gene

Localization for KRTAP4-16P Gene

Gene Ontology (GO) - Cellular Components for KRTAP4-16P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0045095 keratin filament --
genes like me logo Genes that share ontologies with KRTAP4-16P: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for KRTAP4-16P Gene

Pathways for KRTAP4-16P Gene

SuperPathways for KRTAP4-16P Gene

No Data Available

Interacting Proteins for KRTAP4-16P Gene

Gene Ontology (GO) - Biological Process for KRTAP4-16P Gene

None

No data available for Pathways by source for KRTAP4-16P Gene

Transcripts for KRTAP4-16P Gene

mRNA/cDNA for KRTAP4-16P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KRTAP4-16P Gene

No ASD Table

Relevant External Links for KRTAP4-16P Gene

GeneLoc Exon Structure for
KRTAP4-16P
ECgene alternative splicing isoforms for
KRTAP4-16P

Expression for KRTAP4-16P Gene

mRNA expression in normal human tissues for KRTAP4-16P Gene

genes like me logo Genes that share expressions with KRTAP4-16P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for KRTAP4-16P Gene

Orthologs for KRTAP4-16P Gene

This gene was present in the common ancestor of mammals.

Orthologs for KRTAP4-16P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia KRTAP4-16P 36
  • 90 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 36
  • 47 (a)
ManyToMany
-- 36
  • 46 (a)
ManyToMany
-- 36
  • 48 (a)
ManyToMany
-- 36
  • 49 (a)
ManyToMany
-- 36
  • 48 (a)
ManyToMany
KRTAP4-7 36
  • 49 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm11555 36
  • 54 (a)
ManyToMany
Gm11563 36
  • 59 (a)
ManyToMany
Krtap4-1 36
  • 53 (a)
ManyToMany
Krtap4-2 36
  • 54 (a)
ManyToMany
Krtap4-7 36
  • 51 (a)
ManyToMany
Species with no ortholog for KRTAP4-16P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for KRTAP4-16P Gene

ENSEMBL:
Gene Tree for KRTAP4-16P (if available)
TreeFam:
Gene Tree for KRTAP4-16P (if available)

Paralogs for KRTAP4-16P Gene

Selected SIMAP similar genes for KRTAP4-16P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with KRTAP4-16P: view

Variants for KRTAP4-16P Gene

Relevant External Links for KRTAP4-16P Gene

HapMap Linkage Disequilibrium report
KRTAP4-16P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for KRTAP4-16P Gene

Disorders for KRTAP4-16P Gene

No disorders were found for KRTAP4-16P Gene.

No data available for UniProtKB/Swiss-Prot for KRTAP4-16P Gene

Publications for KRTAP4-16P Gene

  1. Characterization of a cluster of human high/ultrahigh sulfur keratin- associated protein genes embedded in the type I keratin gene domain on chromosome 17q12-21. (PMID: 11279113) Rogers M.A. … Schweizer J. (J. Biol. Chem. 2001) 3

Products for KRTAP4-16P Gene

Sources for KRTAP4-16P Gene

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