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Aliases for KRTAP29-1 Gene

Aliases for KRTAP29-1 Gene

  • Keratin Associated Protein 29-1 2 3 5
  • Keratin-Associated Protein 29.2 3 4
  • KAP29.2 3 4
  • Keratin-Associated Protein 29-1 3

External Ids for KRTAP29-1 Gene

Previous GeneCards Identifiers for KRTAP29-1 Gene

  • GC00U928091
  • GC17M039469
  • GC17M039470
  • GC17M039474
  • GC17M039476
  • GC17M039478
  • GC17M039480
  • GC17M039482

Summaries for KRTAP29-1 Gene

GeneCards Summary for KRTAP29-1 Gene

KRTAP29-1 (Keratin Associated Protein 29-1) is a Protein Coding gene. Among its related pathways are Keratinization and Developmental Biology.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRTAP29-1 Gene

Genomics for KRTAP29-1 Gene

Regulatory Elements for KRTAP29-1 Gene

Enhancers for KRTAP29-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G041338 1.2 Ensembl ENCODE dbSUPER 10.6 -38.2 -38161 6.0 PAF1 PKNOX1 MTA2 BHLHE40 YBX1 EBF1 TBX21 RELA GATA3 NBN KRT38 KRTAP16-1 KRTAP29-1 KRT31 LOC100505782 KRTAP17-1 KRTAP9-6 KRT37 ENSG00000234477 KRT32
GH17G041333 0.6 ENCODE dbSUPER 11.1 -31.8 -31820 1.8 EBF1 KRT34 KRTAP29-1 KRT31 LOC100505782 KRT37 ENSG00000234477 KRT40 ENSG00000108516 KRT33A
GH17G041336 0.4 ENCODE 10.5 -33.4 -33393 0.2 NRF1 KRTAP29-1 KRTAP16-1 KRTAP17-1 KRTAP9-6 KRT31 KRT37 LOC100505782 ENSG00000234477 RNU2-32P KRT32
GH17G041307 0.9 Ensembl ENCODE 0.4 -5.9 -5930 2.5 ZSCAN5A ZNF362 ZBTB11 ZNF394 ZBTB40 ZNF121 EGR1 POLR2A GLIS1 ZBTB33 KRT38 KRT31 KRT36 TOP2A KRTAP16-1 KRTAP29-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KRTAP29-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for KRTAP29-1 Gene

Chromosome:
17
Start:
41,301,826 bp from pter
End:
41,302,851 bp from pter
Size:
1,026 bases
Orientation:
Minus strand

Genomic View for KRTAP29-1 Gene

Genes around KRTAP29-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRTAP29-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRTAP29-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRTAP29-1 Gene

Proteins for KRTAP29-1 Gene

  • Protein details for KRTAP29-1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A8MX34-KR291_HUMAN
    Recommended name:
    Keratin-associated protein 29-1
    Protein Accession:
    A8MX34

    Protein attributes for KRTAP29-1 Gene

    Size:
    341 amino acids
    Molecular mass:
    35211 Da
    Quaternary structure:
    No Data Available

neXtProt entry for KRTAP29-1 Gene

Post-translational modifications for KRTAP29-1 Gene

No Post-translational modifications

Other Protein References for KRTAP29-1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for KRTAP29-1 Gene

Domains & Families for KRTAP29-1 Gene

Gene Families for KRTAP29-1 Gene

Protein Domains for KRTAP29-1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for KRTAP29-1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A8MX34

UniProtKB/Swiss-Prot:

KR291_HUMAN :
  • Belongs to the KRTAP type 10 family.
Family:
  • Belongs to the KRTAP type 10 family.
genes like me logo Genes that share domains with KRTAP29-1: view

Function for KRTAP29-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRTAP29-1 Gene

Localization for KRTAP29-1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for KRTAP29-1 gene
Compartment Confidence
cytosol 5
extracellular 2
cytoskeleton 2
mitochondrion 1
peroxisome 1
nucleus 1

Gene Ontology (GO) - Cellular Components for KRTAP29-1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005829 cytosol TAS --
GO:0005882 intermediate filament IEA --
GO:0045095 keratin filament IEA --
genes like me logo Genes that share ontologies with KRTAP29-1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for KRTAP29-1 Gene

Pathways & Interactions for KRTAP29-1 Gene

SuperPathways for KRTAP29-1 Gene

SuperPathway Contained pathways
1 Developmental Biology
2 Keratinization
genes like me logo Genes that share pathways with KRTAP29-1: view

Pathways by source for KRTAP29-1 Gene

2 Reactome pathways for KRTAP29-1 Gene

Interacting Proteins for KRTAP29-1 Gene

Gene Ontology (GO) - Biological Process for KRTAP29-1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0031424 keratinization TAS --
genes like me logo Genes that share ontologies with KRTAP29-1: view

No data available for SIGNOR curated interactions for KRTAP29-1 Gene

Drugs & Compounds for KRTAP29-1 Gene

No Compound Related Data Available

Transcripts for KRTAP29-1 Gene

mRNA/cDNA for KRTAP29-1 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KRTAP29-1 Gene

No ASD Table

Relevant External Links for KRTAP29-1 Gene

GeneLoc Exon Structure for
KRTAP29-1
ECgene alternative splicing isoforms for
KRTAP29-1

Expression for KRTAP29-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KRTAP29-1 Gene

mRNA differential expression in normal tissues according to GTEx for KRTAP29-1 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x41.4) and Skin - Sun Exposed (Lower leg) (x5.7).

SOURCE GeneReport for Unigene cluster for KRTAP29-1 Gene:

Hs.744833
genes like me logo Genes that share expression patterns with KRTAP29-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRTAP29-1 Gene

Orthologs for KRTAP29-1 Gene

This gene was present in the common ancestor of mammals.

Orthologs for KRTAP29-1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia KRTAP29-1 35
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia LOC101907983 34
  • 80.49 (n)
rat
(Rattus norvegicus)
Mammalia LOC102554192 34
  • 71.24 (n)
mouse
(Mus musculus)
Mammalia Krtap29-1 35
  • 44 (a)
OneToOne
Species where no ortholog for KRTAP29-1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for KRTAP29-1 Gene

ENSEMBL:
Gene Tree for KRTAP29-1 (if available)
TreeFam:
Gene Tree for KRTAP29-1 (if available)

Paralogs for KRTAP29-1 Gene

No data available for Paralogs for KRTAP29-1 Gene

Variants for KRTAP29-1 Gene

Structural Variations from Database of Genomic Variants (DGV) for KRTAP29-1 Gene

Variant ID Type Subtype PubMed ID
esv2758690 CNV gain+loss 17122850
esv3640583 CNV loss 21293372
nsv1055426 CNV gain 25217958
nsv1146669 OTHER inversion 26484159

Variation tolerance for KRTAP29-1 Gene

Gene Damage Index Score: 13.49; 95.53% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for KRTAP29-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRTAP29-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for KRTAP29-1 Gene

Disorders for KRTAP29-1 Gene

Relevant External Links for KRTAP29-1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KRTAP29-1

No disorders were found for KRTAP29-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KRTAP29-1 Gene

Publications for KRTAP29-1 Gene

  1. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody M.C. … Nusbaum C. (Nature 2006) 3 4 64

Products for KRTAP29-1 Gene

Sources for KRTAP29-1 Gene

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