Free for academic non-profit institutions. Other users need a Commercial license

Aliases for KRTAP2-5P Gene

Subcategory (RNA class) for KRTAP2-5P Gene

lncRNA

Aliases for KRTAP2-5P Gene

  • Keratin Associated Protein 2-5, Pseudogene 2 3 5
  • Keratin Associated Protein 2 Pseudogene 1 2 3
  • Keratin-Associated Protein 2A Pseudogene 3
  • KRTAP2P1 3
  • KAP2A 3

External Ids for KRTAP2-5P Gene

ORGUL Members for KRTAP2-5P Gene

Previous HGNC Symbols for KRTAP2-5P Gene

  • KRTAP2P1

Previous GeneCards Identifiers for KRTAP2-5P Gene

  • GC17P039229

Summaries for KRTAP2-5P Gene

GeneCards Summary for KRTAP2-5P Gene

KRTAP2-5P (Keratin Associated Protein 2-5, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for KRTAP2-5P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRTAP2-5P Gene

Genomics for KRTAP2-5P Gene

GeneHancer (GH) Regulatory Elements for KRTAP2-5P Gene

Promoters and enhancers for KRTAP2-5P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I041338 Enhancer 1 Ensembl ENCODE dbSUPER 9.4 +269.1 269065 6 PKNOX1 YBX1 EBF1 RELA GATA3 NBN ZNF24 EZH2 KRT38 KRTAP16-1 KRTAP29-1 KRT31 LOC100505782 KRTAP17-1 KRTAP9-6 KRT37 ENSG00000234477 RNU2-32P
GH17I041336 Enhancer 0.3 ENCODE 9.4 +264.3 264298 0.2 NRF1 ENSG00000108516 KRTAP29-1 KRTAP16-1 KRTAP17-1 KRTAP9-6 KRT31 KRT37 LOC100505782 ENSG00000234477 KRT32
GH17I041066 Promoter/Enhancer 1.4 EPDnew ENCODE 0.4 -5.2 -5205 1.9 HDAC1 ATF1 ZBTB40 TCF12 ZNF766 FOS ATF7 CREM ZBTB11 CEBPB KRTAP2-4 KRTAP4-8 KRTAP4-6 KRTAP2-5P GC17M041060
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around KRTAP2-5P on UCSC Golden Path with GeneCards custom track

Genomic Locations for KRTAP2-5P Gene

Genomic Locations for KRTAP2-5P Gene
chr17:41,071,946-41,072,346
(GRCh38/hg38)
Size:
401 bases
Orientation:
Plus strand
chr17:39,228,198-39,228,598
(GRCh37/hg19)

Genomic View for KRTAP2-5P Gene

Genes around KRTAP2-5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRTAP2-5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRTAP2-5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRTAP2-5P Gene

Proteins for KRTAP2-5P Gene

Post-translational modifications for KRTAP2-5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRTAP2-5P Gene

Domains & Families for KRTAP2-5P Gene

Gene Families for KRTAP2-5P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KRTAP2-5P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KRTAP2-5P Gene

Function for KRTAP2-5P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRTAP2-5P Gene

Localization for KRTAP2-5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KRTAP2-5P Gene

Pathways & Interactions for KRTAP2-5P Gene

SuperPathways for KRTAP2-5P Gene

No Data Available

Interacting Proteins for KRTAP2-5P Gene

Gene Ontology (GO) - Biological Process for KRTAP2-5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KRTAP2-5P Gene

Drugs & Compounds for KRTAP2-5P Gene

No Compound Related Data Available

Transcripts for KRTAP2-5P Gene

mRNA/cDNA for KRTAP2-5P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KRTAP2-5P Gene

No ASD Table

Relevant External Links for KRTAP2-5P Gene

GeneLoc Exon Structure for
KRTAP2-5P
ECgene alternative splicing isoforms for
KRTAP2-5P

Expression for KRTAP2-5P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KRTAP2-5P Gene

genes like me logo Genes that share expression patterns with KRTAP2-5P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRTAP2-5P Gene

Orthologs for KRTAP2-5P Gene

Evolution for KRTAP2-5P Gene

ENSEMBL:
Gene Tree for KRTAP2-5P (if available)
TreeFam:
Gene Tree for KRTAP2-5P (if available)

No data available for Orthologs for KRTAP2-5P Gene

Paralogs for KRTAP2-5P Gene

No data available for Paralogs for KRTAP2-5P Gene

Variants for KRTAP2-5P Gene

Additional Variant Information for KRTAP2-5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRTAP2-5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRTAP2-5P Gene

Disorders for KRTAP2-5P Gene

No disorders were found for KRTAP2-5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KRTAP2-5P Gene

Publications for KRTAP2-5P Gene

  1. Characterization of a cluster of human high/ultrahigh sulfur keratin-associated protein genes embedded in the type I keratin gene domain on chromosome 17q12-21. (PMID: 11279113) Rogers MA … Schweizer J (The Journal of biological chemistry 2001) 3 58

Products for KRTAP2-5P Gene

Sources for KRTAP2-5P Gene

Content
Loading form....