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Aliases for KRT36 Gene

Aliases for KRT36 Gene

  • Keratin 36 2 3
  • Keratin 36, Type I 2 3 5
  • Keratin, Hair, Acidic, 6 2 3
  • Hair Keratin, Type I Ha6 3 4
  • Keratin-36 3 4
  • KRTHA6 3 4
  • HHa6 3 4
  • K36 3 4
  • HKA6 4
  • HA6 3

External Ids for KRT36 Gene

Previous HGNC Symbols for KRT36 Gene

  • KRTHA6

Previous GeneCards Identifiers for KRT36 Gene

  • GC17M036896
  • GC17M039642
  • GC17M035406

Summaries for KRT36 Gene

Entrez Gene Summary for KRT36 Gene

  • The protein encoded by this gene is a member of the keratin gene family. This type I hair keratin is an acidic protein which heterodimerizes with type II keratins to form hair and nails. The type I hair keratins are clustered in a region of chromosome 17q12-q21 and have the same direction of transcription. [provided by RefSeq, Jul 2008]

GeneCards Summary for KRT36 Gene

KRT36 (Keratin 36) is a Protein Coding gene. GO annotations related to this gene include structural molecule activity and structural constituent of epidermis. An important paralog of this gene is KRT12.

Gene Wiki entry for KRT36 Gene

No data available for UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRT36 Gene

Genomics for KRT36 Gene

Regulatory Elements for KRT36 Gene

Enhancers for KRT36 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around KRT36 on UCSC Golden Path with GeneCards custom track

Genomic Location for KRT36 Gene

Chromosome:
17
Start:
41,486,136 bp from pter
End:
41,494,015 bp from pter
Size:
7,880 bases
Orientation:
Minus strand

Genomic View for KRT36 Gene

Genes around KRT36 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT36 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT36 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT36 Gene

Proteins for KRT36 Gene

  • Protein details for KRT36 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O76013-KRT36_HUMAN
    Recommended name:
    Keratin, type I cuticular Ha6
    Protein Accession:
    O76013
    Secondary Accessions:
    • Q86XG4

    Protein attributes for KRT36 Gene

    Size:
    467 amino acids
    Molecular mass:
    52247 Da
    Quaternary structure:
    • Heterotetramer of two type I and two type II keratins.
    Miscellaneous:
    • There are two types of hair/microfibrillar keratin, I (acidic) and II (neutral to basic).

    Alternative splice isoforms for KRT36 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for KRT36 Gene

Proteomics data for KRT36 Gene at MOPED

Post-translational modifications for KRT36 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for KRT36 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for KRT36 Gene

Domains & Families for KRT36 Gene

Gene Families for KRT36 Gene

Suggested Antigen Peptide Sequences for KRT36 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

O76013

UniProtKB/Swiss-Prot:

KRT36_HUMAN :
  • Belongs to the intermediate filament family.
Family:
  • Belongs to the intermediate filament family.
genes like me logo Genes that share domains with KRT36: view

Function for KRT36 Gene

genes like me logo Genes that share phenotypes with KRT36: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT36 Gene

Localization for KRT36 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for KRT36 Gene COMPARTMENTS Subcellular localization image for KRT36 gene
Compartment Confidence
extracellular 5
cytoskeleton 3
cytosol 3
mitochondrion 2
nucleus 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for KRT36 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0045111 intermediate filament cytoskeleton IEA --
genes like me logo Genes that share ontologies with KRT36: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for KRT36 Gene

Pathways & Interactions for KRT36 Gene

SuperPathways for KRT36 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KRT36 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KRT36 Gene

Drugs & Compounds for KRT36 Gene

No Compound Related Data Available

Transcripts for KRT36 Gene

mRNA/cDNA for KRT36 Gene

(2) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(7) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KRT36 Gene

Keratin 36:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KRT36 Gene

No ASD Table

Relevant External Links for KRT36 Gene

GeneLoc Exon Structure for
KRT36
ECgene alternative splicing isoforms for
KRT36

Expression for KRT36 Gene

mRNA expression in normal human tissues for KRT36 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for KRT36 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x21.5), Skin - Sun Exposed (Lower leg) (x6.3), and Spleen (x4.0).

Protein differential expression in normal tissues from HIPED for KRT36 Gene

This gene is overexpressed in Skin (14.2), Bone marrow mesenchymal stem cell (12.4), Plasma (8.4), and Saliva (6.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for KRT36 Gene



SOURCE GeneReport for Unigene cluster for KRT36 Gene Hs.248189

mRNA Expression by UniProt/SwissProt for KRT36 Gene

O76013-KRT36_HUMAN
Tissue specificity: Expressed in the hair follicles.
genes like me logo Genes that share expression patterns with KRT36: view

Primer Products

No data available for Protein tissue co-expression partners for KRT36 Gene

Orthologs for KRT36 Gene

This gene was present in the common ancestor of mammals.

Orthologs for KRT36 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia KRT36 35
  • 87.67 (n)
  • 86.12 (a)
KRT36 36
  • 86 (a)
OneToOne
dog
(Canis familiaris)
Mammalia KRT36 35
  • 88.7 (n)
  • 89.42 (a)
KRT36 36
  • 89 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Krt36 35
  • 85.8 (n)
  • 84.37 (a)
Krt36 16
Krt36 36
  • 84 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia KRT36 35
  • 98.72 (n)
  • 97.86 (a)
KRT36 36
  • 98 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Krt36 35
  • 85.07 (n)
  • 85.87 (a)
oppossum
(Monodelphis domestica)
Mammalia KRT36 36
  • 82 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 70 (a)
OneToMany
-- 36
  • 78 (a)
OneToMany
Species with no ortholog for KRT36:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for KRT36 Gene

ENSEMBL:
Gene Tree for KRT36 (if available)
TreeFam:
Gene Tree for KRT36 (if available)

Paralogs for KRT36 Gene

genes like me logo Genes that share paralogs with KRT36: view

Variants for KRT36 Gene

Sequence variations from dbSNP and Humsavar for KRT36 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs2301354 - 41,487,394(-) ACGTA(C/T)GGTCA downstream-variant-500B, reference, missense
rs8082683 - 41,489,509(+) GCTCC(A/G)CGTTC nc-transcript-variant, reference, missense
rs8069943 - 41,489,488(+) ACTCC(C/T)GGATG nc-transcript-variant, reference, missense
rs9675246 - 41,488,648(+) TGGTC(C/T)GGAAG nc-transcript-variant, reference, missense
rs9904102 - 41,487,608(+) TCTGC(A/G)GTTAT downstream-variant-500B, reference, missense

Structural Variations from Database of Genomic Variants (DGV) for KRT36 Gene

Variant ID Type Subtype PubMed ID
dgv961e1 CNV Complex 17122850
nsv483014 CNV Loss 15286789
dgv962e1 CNV Complex 17122850
nsv510711 CNV Loss 20534489
nsv526466 CNV Gain 19592680
nsv524606 CNV Loss 19592680
nsv9555 CNV Gain 18304495
nsv827992 CNV Gain 20364138

Variation tolerance for KRT36 Gene

Residual Variation Intolerance Score: 97.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 17.74; 98.32% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Relevant External Links for KRT36 Gene

Disorders for KRT36 Gene

Relevant External Links for KRT36

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KRT36

No disorders were found for KRT36 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KRT36 Gene

Publications for KRT36 Gene

  1. Characterization of a 190-kilobase pair domain of human type I hair keratin genes. (PMID: 9756910) Rogers M.A. … Schweizer J. (J. Biol. Chem. 1998) 2 3 4 67
  2. New consensus nomenclature for mammalian keratins. (PMID: 16831889) Schweizer J. … Wright M.W. (J. Cell Biol. 2006) 2 3
  3. The MEKK1 PHD ubiquitinates TAB1 to activate MAPKs in response to cytokines. (PMID: 25260751) Charlaftis N. … Gallagher E. (EMBO J. 2014) 3
  4. In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine. (PMID: 23533145) Principe S. … Drake R.R. (Proteomics 2013) 3
  5. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3

Products for KRT36 Gene

Sources for KRT36 Gene

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