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Aliases for KRT35 Gene

Aliases for KRT35 Gene

  • Keratin 35, Type I 2 3
  • KRTHA5 3 4 6
  • Keratin, Hair, Acidic, 5 2 3
  • Hair Keratin, Type I Ha5 3 4
  • Keratin-35 3 4
  • HHa5 3 4
  • K35 3 4
  • HHa5 Hair Keratin Type I Intermediate Filament 3
  • Keratin, Type I Cuticular Ha5 3
  • Hard Keratin, Type I, 5 3
  • Hard Keratin Type I 5 2
  • Keratin 35 2
  • Ha-5 3
  • HKA5 4
  • HA5 3

External Ids for KRT35 Gene

Previous HGNC Symbols for KRT35 Gene

  • KRTHA5

Previous GeneCards Identifiers for KRT35 Gene

  • GC17M036887
  • GC17M039632
  • GC17M035396

Summaries for KRT35 Gene

Entrez Gene Summary for KRT35 Gene

  • The protein encoded by this gene is a member of the keratin gene family. This type I hair keratin is an acidic protein which heterodimerizes with type II keratins to form hair and nails. The type I hair keratins are clustered in a region of chromosome 17q12-q21 and have the same direction of transcription. [provided by RefSeq, Jul 2008]

GeneCards Summary for KRT35 Gene

KRT35 (Keratin 35, Type I) is a Protein Coding gene. GO annotations related to this gene include structural molecule activity. An important paralog of this gene is KRT34.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRT35 Gene

Genomics for KRT35 Gene

Regulatory Elements for KRT35 Gene

Genomic Location for KRT35 Gene

Start:
41,476,689 bp from pter
End:
41,481,140 bp from pter
Size:
4,452 bases
Orientation:
Minus strand

Genomic View for KRT35 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KRT35 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT35 Gene

Proteins for KRT35 Gene

  • Protein details for KRT35 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q92764-KRT35_HUMAN
    Recommended name:
    Keratin, type I cuticular Ha5
    Protein Accession:
    Q92764
    Secondary Accessions:
    • O76012
    • Q92651

    Protein attributes for KRT35 Gene

    Size:
    455 amino acids
    Molecular mass:
    50361 Da
    Quaternary structure:
    No Data Available
    Miscellaneous:
    • There are two types of hair/microfibrillar keratin, I (acidic) and II (neutral to basic)
    SequenceCaution:
    • Sequence=CAA62286.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=CAA76387.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

neXtProt entry for KRT35 Gene

Proteomics data for KRT35 Gene at MOPED

Post-translational modifications for KRT35 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for KRT35 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for KRT35 Gene

Domains for KRT35 Gene

Gene Families for KRT35 Gene

HGNC:
  • IFF1 :Intermediate filaments type I, keratins (acidic)

Suggested Antigen Peptide Sequences for KRT35 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q92764

UniProtKB/Swiss-Prot:

KRT35_HUMAN :
  • Q92764
Family:
  • Belongs to the intermediate filament family.
genes like me logo Genes that share domains with KRT35: view

Function for KRT35 Gene

Gene Ontology (GO) - Molecular Function for KRT35 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005198 structural molecule activity IEA --
genes like me logo Genes that share ontologies with KRT35: view

Animal Model Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for KRT35

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for KRT35 Gene

Localization for KRT35 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for KRT35 Gene COMPARTMENTS Subcellular localization image for KRT35 gene
Compartment Confidence
cytoskeleton 3
cytosol 3
mitochondrion 2
nucleus 1

Gene Ontology (GO) - Cellular Components for KRT35 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005615 extracellular space IDA 23580065
GO:0005882 intermediate filament IEA --
GO:0070062 extracellular exosome IDA 23533145
genes like me logo Genes that share ontologies with KRT35: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for KRT35 Gene

Pathways for KRT35 Gene

SuperPathways for KRT35 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KRT35 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0009653 anatomical structure morphogenesis TAS 8823373
genes like me logo Genes that share ontologies with KRT35: view

No data available for Pathways by source for KRT35 Gene

Compounds for KRT35 Gene

(1) Novoseek inferred chemical compound relationships for KRT35 Gene

Compound -log(P) Hits PubMed IDs
paraffin 46.4 1
genes like me logo Genes that share compounds with KRT35: view

Transcripts for KRT35 Gene

mRNA/cDNA for KRT35 Gene

(9) Selected AceView cDNA sequences:
(2) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KRT35 Gene

Keratin 35:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for KRT35

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for KRT35

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for KRT35 Gene

No ASD Table

Relevant External Links for KRT35 Gene

GeneLoc Exon Structure for
KRT35
ECgene alternative splicing isoforms for
KRT35

Expression for KRT35 Gene

mRNA expression in normal human tissues for KRT35 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for KRT35 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (40.7) and Skin - Sun Exposed (Lower leg) (9.1).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for KRT35 Gene

SOURCE GeneReport for Unigene cluster for KRT35 Gene Hs.73082

mRNA Expression by UniProt/SwissProt for KRT35 Gene

Q92764-KRT35_HUMAN
Tissue specificity: Early expression in the hair follicle, mainly found in supramatricial cells and lowermost cortical cells of the hair bulb.
genes like me logo Genes that share expressions with KRT35: view

In Situ Assay Products

Orthologs for KRT35 Gene

This gene was present in the common ancestor of chordates.

Orthologs for KRT35 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia KRT35 35
  • 98.9 (n)
  • 98.9 (a)
KRT35 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia KRT35 35
  • 88.57 (n)
  • 89.23 (a)
KRT35 36
  • 89 (a)
OneToOne
dog
(Canis familiaris)
Mammalia KRT35 35
  • 89.52 (n)
  • 90.77 (a)
KRT35 36
  • 91 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Krt35 35
  • 87.62 (n)
  • 91.21 (a)
Krt35 16
Krt35 36
  • 91 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia KRT35 36
  • 82 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Krt35 35
  • 86.67 (n)
  • 90.55 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100491736 35
  • 61.23 (n)
  • 56.35 (a)
Species with no ortholog for KRT35:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for KRT35 Gene

ENSEMBL:
Gene Tree for KRT35 (if available)
TreeFam:
Gene Tree for KRT35 (if available)

Paralogs for KRT35 Gene

genes like me logo Genes that share paralogs with KRT35: view

Variants for KRT35 Gene

Sequence variations from dbSNP and Humsavar for KRT35 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs743686 - 41,480,992(+) GCAAG(A/G)GCTGC missense, reference
rs762825 -- 41,480,343(-) GCCCA(A/C)TCCTC intron-variant
rs762826 -- 41,481,723(-) AGCTG(C/T)CCCAT upstream-variant-2KB
rs897419 -- 41,480,315(-) CATTT(C/T)CTCTT intron-variant
rs1975769 -- 41,482,795(-) GCCTG(G/T)GCAAC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for KRT35 Gene

Variant ID Type Subtype PubMed ID
dgv961e1 CNV Complex 17122850
nsv483014 CNV Loss 15286789
dgv962e1 CNV Complex 17122850
nsv510711 CNV Loss 20534489
nsv526466 CNV Gain 19592680

Relevant External Links for KRT35 Gene

HapMap Linkage Disequilibrium report
KRT35

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for KRT35 Gene

Disorders for KRT35 Gene

Relevant External Links for KRT35

Genetic Association Database (GAD)
KRT35
genes like me logo Genes that share disorders with KRT35: view

No data available for UniProtKB/Swiss-Prot for KRT35 Gene

Publications for KRT35 Gene

  1. Genomic characterization of the human type I cuticular hair keratin hHa2 and identification of an adjacent novel type I hair keratin gene hHa5. (PMID: 8823373) Rogers M.A. … Schweizer J. (J. Invest. Dermatol. 1996) 2 3 4 23
  2. The catalog of human hair keratins. I. Expression of the nine type I members in the hair follicle. (PMID: 10391933) Langbein L. … Schweizer J. (J. Biol. Chem. 1999) 3 23
  3. Transcriptional activation of a subset of hair keratin genes by the NF-kappaB effector p65/RelA. (PMID: 18021261) Gilon M. … Gat U. (Differentiation 2008) 3 23
  4. Characterization of a 190-kilobase pair domain of human type I hair keratin genes. (PMID: 9756910) Rogers M.A. … Schweizer J. (J. Biol. Chem. 1998) 3 4
  5. New consensus nomenclature for mammalian keratins. (PMID: 16831889) Schweizer J. … Wright M.W. (J. Cell Biol. 2006) 2 3

Products for KRT35 Gene

Sources for KRT35 Gene

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