Free for academic non-profit institutions. Other users need a Commercial license

Aliases for KRT18P48 Gene

Aliases for KRT18P48 Gene

  • Keratin 18 Pseudogene 48 2 3 5

External Ids for KRT18P48 Gene

Previous GeneCards Identifiers for KRT18P48 Gene

  • GC0XM152524
  • GC0XM152868

Summaries for KRT18P48 Gene

GeneCards Summary for KRT18P48 Gene

KRT18P48 (Keratin 18 Pseudogene 48) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRT18P48 Gene

Genomics for KRT18P48 Gene

Regulatory Elements for KRT18P48 Gene

Enhancers for KRT18P48 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XG153598 1 ENCODE 10.7 +5.7 5725 2.4 CREB3L1 SIN3A ZNF121 GLIS2 SP3 REST ZNF610 ZSCAN16 GLIS1 CTCF KRT18P48 LOC105373383 CETN2 FAM58A
GH0XG153721 1.1 ENCODE 6.6 -120.2 -120246 7.2 FOXA2 PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 FOS ZNF263 SP3 SP5 PNCK SLC6A8 KRT18P48 PDZD4 ABCD1 PLXNB3
GH0XG153582 0.8 Ensembl ENCODE 7.5 +22.3 22326 0.9 MAZ POLR2A BHLHE40 TARDBP RELB RELA KRT18P48 FAM58A GC0XP153580 LOC105373383
GH0XG153474 1.2 Ensembl ENCODE dbSUPER 4.8 +128.9 128855 4.4 CTCF SUZ12 RAD21 ZIC2 ZKSCAN1 ZFHX2 FOS EGR2 RNF2 L3MBTL2 KRT18P48 LOC105373381 TREX2
GH0XG153547 0.4 FANTOM5 13.1 +57.9 57942 0.1 FOSL1 FAM58A KRT18P48 LOC105373384 SLC6A8 ATP2B3 GC0XP153580
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KRT18P48 on UCSC Golden Path with GeneCards custom track

Genomic Location for KRT18P48 Gene

Chromosome:
X
Start:
153,603,221 bp from pter
End:
153,605,348 bp from pter
Size:
2,128 bases
Orientation:
Minus strand

Genomic View for KRT18P48 Gene

Genes around KRT18P48 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT18P48 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT18P48 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT18P48 Gene

Proteins for KRT18P48 Gene

Post-translational modifications for KRT18P48 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT18P48 Gene

Domains & Families for KRT18P48 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KRT18P48 Gene

Function for KRT18P48 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT18P48 Gene

Localization for KRT18P48 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KRT18P48 Gene

Pathways & Interactions for KRT18P48 Gene

SuperPathways for KRT18P48 Gene

No Data Available

Interacting Proteins for KRT18P48 Gene

Gene Ontology (GO) - Biological Process for KRT18P48 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KRT18P48 Gene

Transcripts for KRT18P48 Gene

mRNA/cDNA for KRT18P48 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KRT18P48 Gene

No ASD Table

Relevant External Links for KRT18P48 Gene

GeneLoc Exon Structure for
KRT18P48
ECgene alternative splicing isoforms for
KRT18P48

Expression for KRT18P48 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KRT18P48 Gene

mRNA differential expression in normal tissues according to GTEx for KRT18P48 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x6.2), Brain - Cerebellum (x4.9), and Brain - Nucleus accumbens (basal ganglia) (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of KRT18P48 Gene:

KRT18P48
genes like me logo Genes that share expression patterns with KRT18P48: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT18P48 Gene

Orthologs for KRT18P48 Gene

Evolution for KRT18P48 Gene

ENSEMBL:
Gene Tree for KRT18P48 (if available)
TreeFam:
Gene Tree for KRT18P48 (if available)

No data available for Orthologs for KRT18P48 Gene

Paralogs for KRT18P48 Gene

No data available for Paralogs for KRT18P48 Gene

Variants for KRT18P48 Gene

Relevant External Links for KRT18P48 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT18P48

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT18P48 Gene

Disorders for KRT18P48 Gene

Relevant External Links for KRT18P48

Genetic Association Database (GAD)
KRT18P48

No disorders were found for KRT18P48 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KRT18P48 Gene

Publications for KRT18P48 Gene

  1. Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis. (PMID: 20581827) Voight B.F. … . (Nat. Genet. 2010) 46 64

Products for KRT18P48 Gene

Sources for KRT18P48 Gene

Content
Loading form....