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Aliases for KRT18P39 Gene

Aliases for KRT18P39 Gene

  • Keratin 18 Pseudogene 39 2 3 5

External Ids for KRT18P39 Gene

Previous GeneCards Identifiers for KRT18P39 Gene

  • GC02M204338
  • GC02M204628

Summaries for KRT18P39 Gene

GeneCards Summary for KRT18P39 Gene

KRT18P39 (Keratin 18 Pseudogene 39) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRT18P39 Gene

Genomics for KRT18P39 Gene

Regulatory Elements for KRT18P39 Gene

Enhancers for KRT18P39 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G203737 1.5 FANTOM5 Ensembl ENCODE dbSUPER 17.8 +24.2 24217 7.2 ZNF263 GATA3 GATA2 ZSCAN4 CEBPB ZKSCAN1 NR2F2 CD28 KRT18P39 ICOS RNU6-474P RAPH1 CTLA4
GH02G203785 1.5 FANTOM5 Ensembl ENCODE dbSUPER 12.5 -21.7 -21749 2.8 SOX13 FOXA2 JUN CEBPG ZNF644 GATA3 GATA2 HOMEZ SOX5 GATAD2A KRT18P39 RAPH1 RNU6-474P CTLA4
GH02G203781 1.8 FANTOM5 Ensembl ENCODE dbSUPER 6.8 -17.7 -17720 4.1 FOXA2 ATF1 ZFP64 ZNF48 ZNF143 FOS SP5 MXD4 NFYC MIER2 RAPH1 KRT18P39 CD28 CYP20A1 RNU6-474P CTLA4
GH02G203717 1.6 FANTOM5 Ensembl ENCODE dbSUPER 7.6 +45.4 45396 6.2 ELF3 SOX13 PKNOX1 FOXA2 USF1 TAL1 MAX CHD7 ZIC2 RARA CD28 ICOS RAPH1 RNU6-474P KRT18P39 CTLA4 CARF CYP20A1
GH02G203801 1.9 FANTOM5 Ensembl ENCODE dbSUPER 6 -43.3 -43342 14.9 HNRNPUL1 PKNOX1 FOXA2 ZNF133 ARID4B SIN3A DMAP1 ZNF48 YY1 ZNF121 RNU6-474P KRT18P39 CD28 CTLA4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KRT18P39 on UCSC Golden Path with GeneCards custom track

Genomic Location for KRT18P39 Gene

Chromosome:
2
Start:
203,764,233 bp from pter
End:
203,765,632 bp from pter
Size:
1,400 bases
Orientation:
Minus strand

Genomic View for KRT18P39 Gene

Genes around KRT18P39 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT18P39 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT18P39 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT18P39 Gene

Proteins for KRT18P39 Gene

Post-translational modifications for KRT18P39 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT18P39 Gene

Domains & Families for KRT18P39 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KRT18P39 Gene

Function for KRT18P39 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT18P39 Gene

Localization for KRT18P39 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KRT18P39 Gene

Pathways & Interactions for KRT18P39 Gene

SuperPathways for KRT18P39 Gene

No Data Available

Interacting Proteins for KRT18P39 Gene

Gene Ontology (GO) - Biological Process for KRT18P39 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KRT18P39 Gene

Drugs & Compounds for KRT18P39 Gene

No Compound Related Data Available

Transcripts for KRT18P39 Gene

mRNA/cDNA for KRT18P39 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KRT18P39 Gene

No ASD Table

Relevant External Links for KRT18P39 Gene

GeneLoc Exon Structure for
KRT18P39
ECgene alternative splicing isoforms for
KRT18P39

Expression for KRT18P39 Gene

NURSA nuclear receptor signaling pathways regulating expression of KRT18P39 Gene:

KRT18P39
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT18P39 Gene

Orthologs for KRT18P39 Gene

Evolution for KRT18P39 Gene

ENSEMBL:
Gene Tree for KRT18P39 (if available)
TreeFam:
Gene Tree for KRT18P39 (if available)

No data available for Orthologs for KRT18P39 Gene

Paralogs for KRT18P39 Gene

No data available for Paralogs for KRT18P39 Gene

Variants for KRT18P39 Gene

Relevant External Links for KRT18P39 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT18P39

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT18P39 Gene

Disorders for KRT18P39 Gene

Relevant External Links for KRT18P39

Genetic Association Database (GAD)
KRT18P39

No disorders were found for KRT18P39 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KRT18P39 Gene

Publications for KRT18P39 Gene

  1. A genome-wide association study identifies two new risk loci for Graves' disease. (PMID: 21841780) Chu X. … Song H.D. (Nat. Genet. 2011) 46 64
  2. Genome-wide association study in alopecia areata implicates both innate and adaptive immunity. (PMID: 20596022) Petukhova L. … Christiano A.M. (Nature 2010) 46 64
  3. REL, encoding a member of the NF-kappaB family of transcription factors, is a newly defined risk locus for rheumatoid arthritis. (PMID: 19503088) Gregersen P.K. … Siminovitch K.A. (Nat. Genet. 2009) 46 64

Products for KRT18P39 Gene

Sources for KRT18P39 Gene

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