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Aliases for KRT18P34 Gene

Subcategory (RNA class) for KRT18P34 Gene

lncRNA

Aliases for KRT18P34 Gene

  • Keratin 18 Pseudogene 34 2 3 5

External Ids for KRT18P34 Gene

ORGUL Members for KRT18P34 Gene

Previous GeneCards Identifiers for KRT18P34 Gene

  • GC03M158365
  • GC03M156881

Summaries for KRT18P34 Gene

GeneCards Summary for KRT18P34 Gene

KRT18P34 (Keratin 18 Pseudogene 34) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRT18P34 Gene

Genomics for KRT18P34 Gene

Regulatory Elements for KRT18P34 Gene

Enhancers for KRT18P34 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G157156 2.4 ENCODE dbSUPER 30.8 +5.1 5052 7.1 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC KRT18P34 CCNL1 ENSG00000243176 LINC00880 ENSG00000201778
GH03G157124 2.2 VISTA FANTOM5 Ensembl ENCODE dbSUPER 27.4 +32.5 32486 13.5 HDGF PKNOX1 FOXA2 MLX ARNT ZFP64 SIN3A ARID4B DMAP1 FEZF1 KRT18P34 CCNL1 LEKR1 LINC00880 ENSG00000241770 TIPARP SSR3 TIPARP-AS1 GC03M157131
GH03G157173 1.4 ENCODE dbSUPER 30.3 -11.3 -11302 3.6 MLX CREB3L1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC KRT18P34 CCNL1 PA2G4P4 ENSG00000243176 LOC100420048
GH03G157274 1 ENCODE dbSUPER 28.6 -110.9 -110948 1.1 PKNOX1 FEZF1 BCL11B ETS1 ZNF121 FOXM1 CTBP1 ZSCAN5C NR2F6 NR2F1 KRT18P34 LOC105374179 PTX3
GH03G157310 1 ENCODE dbSUPER 27.9 -147.9 -147874 2.0 JUN CEBPG RFX5 NFYB RELB IKZF2 MTA2 BHLHE40 CEBPB USF2 KRT18P34 LINC02029 LOC105374179 PTX3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KRT18P34 on UCSC Golden Path with GeneCards custom track

Genomic Location for KRT18P34 Gene

Chromosome:
3
Start:
157,162,609 bp from pter
End:
157,163,934 bp from pter
Size:
1,326 bases
Orientation:
Minus strand

Genomic View for KRT18P34 Gene

Genes around KRT18P34 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT18P34 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT18P34 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT18P34 Gene

Proteins for KRT18P34 Gene

Post-translational modifications for KRT18P34 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT18P34 Gene

Domains & Families for KRT18P34 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KRT18P34 Gene

Function for KRT18P34 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT18P34 Gene

Localization for KRT18P34 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KRT18P34 Gene

Pathways & Interactions for KRT18P34 Gene

SuperPathways for KRT18P34 Gene

No Data Available

Interacting Proteins for KRT18P34 Gene

Gene Ontology (GO) - Biological Process for KRT18P34 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KRT18P34 Gene

Transcripts for KRT18P34 Gene

mRNA/cDNA for KRT18P34 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KRT18P34 Gene

No ASD Table

Relevant External Links for KRT18P34 Gene

GeneLoc Exon Structure for
KRT18P34
ECgene alternative splicing isoforms for
KRT18P34

Expression for KRT18P34 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KRT18P34 Gene

mRNA expression in normal human tissues for KRT18P34 Gene

NURSA nuclear receptor signaling pathways regulating expression of KRT18P34 Gene:

KRT18P34
genes like me logo Genes that share expression patterns with KRT18P34: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT18P34 Gene

Orthologs for KRT18P34 Gene

Evolution for KRT18P34 Gene

ENSEMBL:
Gene Tree for KRT18P34 (if available)
TreeFam:
Gene Tree for KRT18P34 (if available)

No data available for Orthologs for KRT18P34 Gene

Paralogs for KRT18P34 Gene

No data available for Paralogs for KRT18P34 Gene

Variants for KRT18P34 Gene

Relevant External Links for KRT18P34 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT18P34

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT18P34 Gene

Disorders for KRT18P34 Gene

Relevant External Links for KRT18P34

Genetic Association Database (GAD)
KRT18P34

No disorders were found for KRT18P34 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KRT18P34 Gene

Publications for KRT18P34 Gene

  1. Genome-wide meta-analysis for severe diabetic retinopathy. (PMID: 21441570) Grassi M.A. … Nicolae D.L. (Hum. Mol. Genet. 2011) 3 64
  2. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs J.B. … Dupuis J. (BMC Med. Genet. 2007) 46 64

Products for KRT18P34 Gene

Sources for KRT18P34 Gene

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