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Aliases for KRT18P17 Gene

Aliases for KRT18P17 Gene

  • Keratin 18 Pseudogene 17 2 3 5

External Ids for KRT18P17 Gene

Summaries for KRT18P17 Gene

GeneCards Summary for KRT18P17 Gene

KRT18P17 (Keratin 18 Pseudogene 17) is a Pseudogene.

Additional gene information for KRT18P17 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRT18P17 Gene

Genomics for KRT18P17 Gene

GeneHancer (GH) Regulatory Elements for KRT18P17 Gene

Promoters and enhancers for KRT18P17 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I012749 Enhancer 1.2 Ensembl ENCODE dbSUPER 11.9 +36.6 36611 5 HDAC1 PKNOX1 BATF IRF4 RFX5 YY1 SCRT2 FOS BCLAF1 RUNX3 CAND2 MKRN2 KRT18P17 TMEM40 CRIP1P1
GH03I012700 Enhancer 0.8 Ensembl ENCODE 11.9 +85.9 85946 3.5 SCRT1 JUN MAX CEBPB FOSL1 JUND CTBP1 GATA3 HMBOX1 RCOR1 CAND2 MKRN2 KRT18P17 ENSG00000272263 CRIP1P1 TMEM40
GH03I012832 Enhancer 0.6 ENCODE 12 -44.9 -44895 1.3 HNRNPUL1 SMAD5 CBFB ELF4 POLR2B POLR2A NFATC1 ZBTB17 ZBTB20 SUPT5H ENSG00000272263 CAND2 KRT18P17 RPL32 TAMM41 LINC02022 TSEN2 GC03M012839
GH03I012769 Promoter 0.8 EPDnew 0.4 +19.1 19131 0.1 ZNF121 CTCF L3MBTL2 SMARCA4 MGA TMEM40 KRT18P17
GH03I012780 Enhancer 0.3 ENCODE 0.4 +7.5 7501 0.9 ZFHX2 CAND2 KRT18P17 TMEM40
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around KRT18P17 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KRT18P17 Gene

Genomic Locations for KRT18P17 Gene
chr3:12,787,335-12,788,673
(GRCh38/hg38)
Size:
1,339 bases
Orientation:
Minus strand
chr3:12,828,834-12,830,219
(GRCh37/hg19)

Genomic View for KRT18P17 Gene

Genes around KRT18P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT18P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT18P17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT18P17 Gene

Proteins for KRT18P17 Gene

Post-translational modifications for KRT18P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT18P17 Gene

Domains & Families for KRT18P17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KRT18P17 Gene

Function for KRT18P17 Gene

Phenotypes From GWAS Catalog for KRT18P17 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT18P17 Gene

Localization for KRT18P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KRT18P17 Gene

Pathways & Interactions for KRT18P17 Gene

SuperPathways for KRT18P17 Gene

No Data Available

Interacting Proteins for KRT18P17 Gene

Gene Ontology (GO) - Biological Process for KRT18P17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KRT18P17 Gene

Drugs & Compounds for KRT18P17 Gene

No Compound Related Data Available

Transcripts for KRT18P17 Gene

mRNA/cDNA for KRT18P17 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KRT18P17 Gene

No ASD Table

Relevant External Links for KRT18P17 Gene

GeneLoc Exon Structure for
KRT18P17
ECgene alternative splicing isoforms for
KRT18P17

Expression for KRT18P17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KRT18P17 Gene

mRNA differential expression in normal tissues according to GTEx for KRT18P17 Gene

This gene is overexpressed in Testis (x19.2).

NURSA nuclear receptor signaling pathways regulating expression of KRT18P17 Gene:

KRT18P17
genes like me logo Genes that share expression patterns with KRT18P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT18P17 Gene

Orthologs for KRT18P17 Gene

Evolution for KRT18P17 Gene

ENSEMBL:
Gene Tree for KRT18P17 (if available)
TreeFam:
Gene Tree for KRT18P17 (if available)

No data available for Orthologs for KRT18P17 Gene

Paralogs for KRT18P17 Gene

No data available for Paralogs for KRT18P17 Gene

Variants for KRT18P17 Gene

Additional Variant Information for KRT18P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT18P17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT18P17 Gene

Disorders for KRT18P17 Gene

No disorders were found for KRT18P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KRT18P17 Gene

Publications for KRT18P17 Gene

No publications were found for KRT18P17 Gene.

Products for KRT18P17 Gene

Sources for KRT18P17 Gene

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