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Aliases for KRT18P13 Gene

Aliases for KRT18P13 Gene

  • Keratin 18 Pseudogene 13 2 3 5
  • Keratin 18-Like 3 2 3
  • KRT18L3 3

External Ids for KRT18P13 Gene

Previous HGNC Symbols for KRT18P13 Gene

  • KRT18L3

Previous GeneCards Identifiers for KRT18P13 Gene

  • GC09P099501
  • GC09P100462
  • GC09P070062

Summaries for KRT18P13 Gene

GeneCards Summary for KRT18P13 Gene

KRT18P13 (Keratin 18 Pseudogene 13) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRT18P13 Gene

Genomics for KRT18P13 Gene

Regulatory Elements for KRT18P13 Gene

Enhancers for KRT18P13 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F097710 0.8 Ensembl ENCODE 11.1 +12.1 12134 1.4 ARID4B SIN3A RAD21 RFX5 ZNF335 GLIS2 ZNF143 MIXL1 EGR2 ZNF654 KRT18P13 TSTD2 ENSG00000260677
GH09F097904 1.4 FANTOM5 Ensembl ENCODE 11.1 +208.2 208190 4.9 CTCF RAD51 PBX2 IKZF1 ZBTB33 SPI1 NR2F2 TRMO FOXE1 KRT18P13 XPA TBC1D2 GC09P097916 GC09P097870
GH09F097713 0.5 Ensembl ENCODE 10.2 +15.7 15723 1.7 KLF1 MAX CEBPB CEBPG RAD21 EP300 POLR2A CEBPA RCOR1 MYC KRT18P13 TRMO ENSG00000260677
GH09F097695 1 ENCODE 9.5 -1.7 -1697 2.8 HDGF ATF1 ZFP64 ARID4B SIN3A GLI4 DMAP1 ZNF48 ZNF2 YY1 ZNF322P1 ZNF510 XPA NCBP1 CCDC180 ZNF782 KRT18P13 TSTD2 GC09M097677
GH09F097740 0.7 Ensembl ENCODE 9.5 +42.5 42547 1.0 CTCF KLF1 ATF1 ETV1 UBTF EBF1 RAD21 ZKSCAN1 CBX5 ETV6 KRT18P13 ENSG00000260677
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around KRT18P13 on UCSC Golden Path with GeneCards custom track

Promoters for KRT18P13 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001309500 -1972 1801 HDGF ATF1 ZFP64 ARID4B SIN3A GLI4 DMAP1 ZNF48 ZNF2 YY1

Genomic Location for KRT18P13 Gene

Chromosome:
9
Start:
97,698,872 bp from pter
End:
97,700,801 bp from pter
Size:
1,930 bases
Orientation:
Plus strand

Genomic View for KRT18P13 Gene

Genes around KRT18P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT18P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT18P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT18P13 Gene

Proteins for KRT18P13 Gene

Post-translational modifications for KRT18P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT18P13 Gene

Domains & Families for KRT18P13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KRT18P13 Gene

Function for KRT18P13 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT18P13 Gene

Localization for KRT18P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KRT18P13 Gene

Pathways & Interactions for KRT18P13 Gene

SuperPathways for KRT18P13 Gene

No Data Available

Interacting Proteins for KRT18P13 Gene

Gene Ontology (GO) - Biological Process for KRT18P13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KRT18P13 Gene

Transcripts for KRT18P13 Gene

mRNA/cDNA for KRT18P13 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KRT18P13 Gene

No ASD Table

Relevant External Links for KRT18P13 Gene

GeneLoc Exon Structure for
KRT18P13
ECgene alternative splicing isoforms for
KRT18P13

Expression for KRT18P13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KRT18P13 Gene

NURSA nuclear receptor signaling pathways regulating expression of KRT18P13 Gene:

KRT18P13
genes like me logo Genes that share expression patterns with KRT18P13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for KRT18P13 Gene

Orthologs for KRT18P13 Gene

Evolution for KRT18P13 Gene

ENSEMBL:
Gene Tree for KRT18P13 (if available)
TreeFam:
Gene Tree for KRT18P13 (if available)

No data available for Orthologs for KRT18P13 Gene

Paralogs for KRT18P13 Gene

No data available for Paralogs for KRT18P13 Gene

Variants for KRT18P13 Gene

Relevant External Links for KRT18P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT18P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT18P13 Gene

Disorders for KRT18P13 Gene

Relevant External Links for KRT18P13

Genetic Association Database (GAD)
KRT18P13

No disorders were found for KRT18P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KRT18P13 Gene

Publications for KRT18P13 Gene

  1. Novel associations for hypothyroidism include known autoimmune risk loci. (PMID: 22493691) Eriksson N. … Do C.B. (PLoS ONE 2012) 3 46 64
  2. Genome-wide association analyses of child genotype effects and parent-of-origin effects in specific language impairment. (PMID: 24571439) Nudel R. … Newbury D.F. (Genes Brain Behav. 2014) 3 64
  3. Variants near FOXE1 are associated with hypothyroidism and other thyroid conditions: using electronic medical records for genome- and phenome-wide studies. (PMID: 21981779) Denny J.C. … de Andrade M. (Am. J. Hum. Genet. 2011) 46 64
  4. The FOXE1 locus is a major genetic determinant for radiation-related thyroid carcinoma in Chernobyl. (PMID: 20350937) Takahashi M. … Yamashita S. (Hum. Mol. Genet. 2010) 3 64
  5. Common variants on 9q22.33 and 14q13.3 predispose to thyroid cancer in European populations. (PMID: 19198613) Gudmundsson J. … Stefansson K. (Nat. Genet. 2009) 46 64

Products for KRT18P13 Gene

Sources for KRT18P13 Gene

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