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Aliases for KRT18P1 Gene

Aliases for KRT18P1 Gene

  • Keratin 18 Pseudogene 1 2 3 5
  • DJ25J6.3 3

External Ids for KRT18P1 Gene

Previous GeneCards Identifiers for KRT18P1 Gene

  • GC06U990072
  • GC06M028707
  • GC06M029044
  • GC06Mc29081
  • GC06M028937
  • GC06M028744
  • GC06Mj28934

Summaries for KRT18P1 Gene

GeneCards Summary for KRT18P1 Gene

KRT18P1 (Keratin 18 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRT18P1 Gene

Genomics for KRT18P1 Gene

Regulatory Elements for KRT18P1 Gene

Enhancers for KRT18P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F028586 1.2 ENCODE 16.2 +383.3 383302 1.9 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 GPX6 GPX5 ZNF603P ZNF90P2 KRT18P1 OR2W1 OR2AD1P OR2P1P ENSG00000228364 OR2B3
GH06F028141 1.2 ENCODE 16.2 +828.2 828179 2.2 HDGF ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF603P ZKSCAN3 ZSCAN23 ZKSCAN8 ZKSCAN4 HNRNPA1P1 OR2B2 HIST1H2BPS2 GPX6 GPX5
GH06F028953 1.4 Ensembl ENCODE 0.3 +16.7 16730 2.1 PKNOX1 ARNT SIN3A ARID4B ZNF2 YY1 CBX5 FOS KLF13 PAF1 TRIM27 ZKSCAN8 ZKSCAN3 HCG15 HCG16 ZKSCAN4 HCG14 ZNF602P ZFP57 HCG4P7
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KRT18P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for KRT18P1 Gene

Chromosome:
6
Start:
28,969,072 bp from pter
End:
28,970,467 bp from pter
Size:
1,396 bases
Orientation:
Minus strand

Genomic View for KRT18P1 Gene

Genes around KRT18P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT18P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT18P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for KRT18P1 Gene

Post-translational modifications for KRT18P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT18P1 Gene

Domains & Families for KRT18P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KRT18P1 Gene

Function for KRT18P1 Gene

Molecular function for KRT18P1 Gene

GENATLAS Biochemistry:
keratin 18,type I-related sequence 6

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT18P1 Gene

Localization for KRT18P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KRT18P1 Gene

Pathways & Interactions for KRT18P1 Gene

SuperPathways for KRT18P1 Gene

No Data Available

Interacting Proteins for KRT18P1 Gene

Gene Ontology (GO) - Biological Process for KRT18P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KRT18P1 Gene

Transcripts for KRT18P1 Gene

mRNA/cDNA for KRT18P1 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KRT18P1 Gene

No ASD Table

Relevant External Links for KRT18P1 Gene

GeneLoc Exon Structure for
KRT18P1
ECgene alternative splicing isoforms for
KRT18P1

Expression for KRT18P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KRT18P1 Gene

mRNA differential expression in normal tissues according to GTEx for KRT18P1 Gene

This gene is overexpressed in Testis (x40.3) and Bladder (x12.7).

NURSA nuclear receptor signaling pathways regulating expression of KRT18P1 Gene:

KRT18P1
genes like me logo Genes that share expression patterns with KRT18P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for KRT18P1 Gene

Orthologs for KRT18P1 Gene

Evolution for KRT18P1 Gene

ENSEMBL:
Gene Tree for KRT18P1 (if available)
TreeFam:
Gene Tree for KRT18P1 (if available)

No data available for Orthologs for KRT18P1 Gene

Paralogs for KRT18P1 Gene

No data available for Paralogs for KRT18P1 Gene

Variants for KRT18P1 Gene

Relevant External Links for KRT18P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT18P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT18P1 Gene

Disorders for KRT18P1 Gene

Relevant External Links for KRT18P1

Genetic Association Database (GAD)
KRT18P1

No disorders were found for KRT18P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KRT18P1 Gene

Publications for KRT18P1 Gene

  1. Genes in a 220-kb region spanning the TNF cluster in human MHC. (PMID: 8824804) Nalabolu S.R. … Weissman S.M. (Genomics 1996) 2 3 64

Products for KRT18P1 Gene

Sources for KRT18P1 Gene

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