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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

KRAS Gene

protein-coding   GIFtS: 69
GCID: GC12M025358

v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog

(Previous name: v-Ki-ras2 Kirsten rat sarcoma 2 viral oncogene homolog...)
(Previous symbol: KRAS2)
 Explore 169 diseases affiliated with
KRAS via our new
 Human Malady Compendium 
Biological research products
for KRAS
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
V-Ki-Ras2 Kirsten Rat Sarcoma Viral Oncogene Homolog1 2     K-RAS4B2
KRAS21 2 3 5     KI-RAS2
RASK22 3 5     NS32
KRAS11 2     C-Kirsten-Ras Protein2
V-Ki-Ras2 Kirsten Rat Sarcoma 2 Viral Oncogene Homolog1 2     Cellular C-Ki-Ras2 Proto-Oncogene2
C-Ki-Ras1     GTPase KRas2
K-Ras 22 3     K-Ras P21 Protein2
NS2 5     Oncogene KRAS22
C-K-RAS2     PR310 C-K-Ras Oncogene2
K-RAS2A2     Transforming Protein P212
K-RAS2B2     Ki-Ras3
K-RAS4A2     C-K-Ras1

External Ids:    HGNC: 64071   Entrez Gene: 38452   Ensembl: ENSG000001337037   OMIM: 1900705   UniProtKB: P011163   

Export aliases for KRAS gene to outside databases

Previous GC identifers: GC12M025250 GC12M025128


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for KRAS:
This gene, a Kirsten ras oncogene homolog from the mammalian ras gene family, encodes a protein that is a member of the
small GTPase superfamily. A single amino acid substitution is responsible for an activating mutation. The transforming
protein that results is implicated in various malignancies, including lung adenocarcinoma, mucinous adenoma, ductal
carcinoma of the pancreas and colorectal carcinoma. Alternative splicing leads to variants encoding two isoforms that
differ in the C-terminal region. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: RASK_HUMAN, P01116
Function: Ras proteins bind GDP/GTP and possess intrinsic GTPase activity

Gene Wiki entry for KRAS


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000012.11  NC_018923.1  NT_009714.17  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the KRAS gene promoter:
         TBP   ATF-2   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): KRAS promoter sequence
   Search SABiosciences Chromatin IP Primers for KRAS

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat KRAS


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 12p12.1   Ensembl cytogenetic band:  12p12.1   HGNC cytogenetic band: 12p12.1

KRAS Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
KRAS gene location

GeneLoc information about chromosome 12         GeneLoc Exon Structure

GeneLoc location for GC12M025358:  view genomic region     (about GC identifiers)

Start:
25,357,723 bp from pter      End:
25,403,870 bp from pter
Size:
46,148 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: RASK_HUMAN, P01116 (See protein sequence)
Recommended Name: GTPase KRas precursor  
Size: 189 amino acids; 21656 Da
Subunit: Interacts with PHLPP. Interacts (active GTP-bound form preferentially) with RGS14 (By similarity)
Subcellular location: Cell membrane; Lipid-anchor; Cytoplasmic side
6/13 PDB 3D structures from and Proteopedia for KRAS (see all 13):
1D8D (3D)        1D8E (3D)        1KZO (3D)        1KZP (3D)        3GFT (3D)        4DSN (3D)    
Secondary accessions: A8K8Z5 B0LPF9 P01118 Q96D10
Alternative splicing: 2 isoforms:  P01116-1   P01116-2, P01118-1   (Variant in position: 152:V->G (in NS3). Variant in position: 153:D->V (in CFC syndrome and NS3, exhibits only minor alterations in its in vitro biochemical behavior compared to wild-type protein). Variant in position: 156:F->I (in NS3/CFC syndrome). Variant in position: 156:F->L (found in a patient with Costello syndrome, exhibits an increase in intrinsic and guanine nucleotide exchange factor catalyzed nucleotide exchange in combination with an impaired GTPase-activating protein-stimulated GTP hydrolysis but functional in interaction with effectors))

Explore the universe of human proteins at neXtProt for KRAS: NX_P01116

Post-translational modifications:

  • Acetylation at Lys-104 prevents interaction with guanine nucleotide exchange factors (GEFs)1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P01116

  • KRAS Protein expression data from MOPED and PaxDb:    About this image 
    KRAS Protein Expression
    REFSEQ proteins (2 alternative transcripts): 
    NP_004976.2  NP_203524.1  

    ENSEMBL proteins: 
     ENSP00000308495   ENSP00000452512   ENSP00000256078   ENSP00000451856  
    Reactome Protein details: P01116
    Human Recombinant Protein Products for KRAS: 
    Browse Purified and Recombinant Proteins at EMD Millipore
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    OriGene Purified Proteins (see all 2): KRAS
    OriGene Protein Over-expression Lysate (see all 2): KRAS
    OriGene Custom Protein Services for KRAS 
    GenScript Custom Purified and Recombinant Proteins Services for KRAS
    Novus Biologicals KRAS Proteins
    Novus Biologicals KRAS Lysates
    Browse Sino Biological Recombinant Proteins
    ProSpec Recombinant Protein for KRAS
    Uscn Proteins for KRAS

    Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005624membrane fraction ----
    GO:0005739mitochondrion IEA--
    GO:0005886plasma membrane TAS--
    GO:0016020membrane ----
    GO:0045121membrane raft IEA--

    KRAS for ontologies           About GeneDecksing



    KRAS Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of KRAS
    R&D Systems Antibodies for KRAS (Ras)
    Cell Signaling Technology (CST) Antibodies for KRAS 
    OriGene Antibodies (see all 11): KRAS
    OriGene Custom Antibody Services for KRAS 
    GenScript Custom Superior Antibodies Services for KRAS
    Novus Biologicals KRAS Antibodies
    Abcam antibodies for KRAS 
    Uscn Antibodies for KRAS
    Search ThermoFisher Antibodies for KRAS

    Assay Products for KRAS: 
    EMD Millipore Kits and Assays for the Analysis of KRAS
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for KRAS
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for KRAS


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    KRAS for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR005225 Small_GTP-bd_dom
     IPR001806 Small_GTPase
     IPR020849 Small_GTPase_Ras

    Graphical View of Domain Structure for InterPro Entry P01116

    ProtoNet protein and cluster: P01116

    2 Blocks protein families:
    IPB001806 Transforming protein P21 RAS signature
    IPB003577 Ras small GTPase


    UniProtKB/Swiss-Prot: RASK_HUMAN, P01116
    Similarity: Belongs to the small GTPase superfamily. Ras family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: RASK_HUMAN, P01116
    Function: Ras proteins bind GDP/GTP and possess intrinsic GTPase activity
    Enzyme regulation: Alternate between an inactive form bound to GDP and an active form bound to GTP. Activated by a
    guanine nucleotide-exchange factor (GEF) and inactivated by a GTPase-activating protein (GAP)

         Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003924GTPase activity IEA--
    GO:0005515protein binding IPI--
    GO:0005525GTP binding IEA--
    GO:0019002GMP binding IEA--
    GO:0019003GDP binding IEA--
         
    KRAS for ontologies           About GeneDecksing


    Phenotypes:
         3 GenomeRNAi human phenotypes for KRAS:
     Decreased TP53 protein express  Decreased viability  Synthetic lethal with Ras 

         15/23 MGI mutant phenotypes (inferred from 14 alleles(MGI details for Kras) (see all 23):
     behavior/neurological  cardiovascular system  cellular  digestive/alimentary  embryogenesis 
     endocrine/exocrine gland  growth/size  hematopoietic system  homeostasis/metabolism  immune system 
     integument  limbs/digits/tail  liver/biliary system  mortality/aging  muscle 

    KRAS for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-outs for KRAS: Krastm1Epa Krastm1Mok Krastm1Tyj
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for KRAS 

    miRNA
    Products:
        
    miRTarBase miRNAs that target KRAS:
    hsa-mir-181c (MIRT003210), hsa-let-7a (MIRT001855), hsa-mir-18a (MIRT000230), hsa-mir-143 (MIRT000312), hsa-let-7g (MIRT000399), hsa-mir-96 (MIRT005553), hsa-mir-155 (MIRT005100)

    OriGene 3'-UTR Clone (see all 2): KRAS
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat KRAS
    8/122 QIAGEN miScript miRNA Assays for microRNAs that regulate KRAS (see all 122):
    hsa-miR-323-3p hsa-miR-193a-3p hsa-miR-300 hsa-miR-15a hsa-miR-134 hsa-miR-605 hsa-miR-30d hsa-miR-3653
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for KRAS (see all 7)
    OriGene shRNA RFP: KRAS
    OriGene siRNA: KRAS
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat KRAS
    Sirion Biotech Custom design and validation of potent shRNA sequences against KRAS 

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for KRAS
    Sirion Biotech Customized adenovirus for overexpression of KRAS 
    Sirion Biotech Customized adenovirus for potent knockdown of KRAS

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for KRAS (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for KRAS (see all 2)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript Custom all cDNA clones Services for KRAS
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for KRAS
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat KRAS 

    Cell Line
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    GenScript Custom overexpressing Cell Line Services for KRAS
    Search LifeMap BioReagents cell lines for KRAS
    Sirion Biotech Customized stable knockdown cell line services for KRAS 
    Sirion Biotech Customized inducible knockdown cell line services for KRAS
    Sirion Biotech Customized stable overexpressing cell line services for KRAS
    Sirion Biotech Customized inducible overexpressing cell line services for KRAS

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for KRAS


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/67 super-pathways (see all 67About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1SHC-mediated signalling
    8/13 pathways (see all 13)
    SHC-mediated signalling1.00
    MEK activation0.47
    SHC-related events0.88
    RAF phosphorylates MEK0.47
    SHC-related events triggered by IGF1R0.83
    RAF activation0.33
    SHC1 events in EGFR signaling0.76
    EGFR Transactivation by Gastrin0.26
    2Signaling by FGFR
    8/12 pathways (see all 12)
    Signaling by FGFR1.00
    DAP12 signaling0.83
    Downstream signaling of activated FGFR0.92
    Signaling by EGFR in Cancer0.83
    Signaling by FGFR in disease0.91
    DAP12 interactions0.76
    Signaling by ERBB20.89
    Signaling by PDGF0.72
    3IL-9 Signaling Pathways
    IL-9 Signaling Pathways1.00
    IL-2 Signaling Pathways0.88
    IL-21 Signaling Pathways0.90
    IL-15 Signaling Pathways0.86
    IL-7 Signaling Pathways0.90
    IL-4 Signaling Pathways0.80
    Common Cytokine Receptor Gamma-Chain Family Signaling Pathways0.90
    Adipocytokines & Insulin Signaling0.33
    4IRS-related events
    IRS-related events1.00
    Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)0.90
    IRS-mediated signalling0.98
    IGF1R signaling cascade0.90
    Insulin receptor signalling cascade0.94
    Signaling by Insulin receptor0.74
    IRS-related events triggered by IGF1R0.93
    5Glioma
    Glioma1.00
    Prostate cancer0.39
    Non-small cell lung cancer0.53
    Signaling Pathways in Glioblastoma0.36
    Melanoma0.43

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    4 EMD Millipore Pathways for KRAS
        G-protein signaling K-RAS regulation pathway
    Development EGFR signaling via small GTPases
    Development EPO-induced MAPK pathway
    G-protein signaling Ras family GTPases in kinase cascades (scheme)

    5/9 R&D Systems Pathways for KRAS (see all 9)
        IL-21 Signaling Pathways
    IL-2 Signaling Pathways
    IL-4 Signaling Pathways
    Adipocytokines & Insulin Signaling
    IL-7 Signaling Pathways


    1 Cell Signaling Technology (CST) Pathway for KRAS
        MAP Kinase Signaling

    5 Tocris Bioscience Pathways for KRAS
        Insulin Pathway
    Apoptosis Pathway
    TGF-beta Pathway
    NF-kappaB Pathway
    VEGF Pathway

    4 GeneGo (Thomson Reuters) Pathways for KRAS
        Development EPO-induced MAPK pathway
    G-protein signaling Ras family GTPases in kinase cascades (scheme)
    Development EGFR signaling via small GTPases
    G-protein signaling K-RAS regulation pathway

    5/14 BioSystems Pathways for KRAS (see all 14
        Oncostatin M Signaling Pathway
    G Protein Signaling Pathways
    Signaling Pathways in Glioblastoma
    EGFR1 Signaling Pathway
    ErbB signaling pathway

    5/65        Reactome Pathways for KRAS (see all 65)
        SHC-related events
    EGFR Transactivation by Gastrin
    p38MAPK events
    SHC-mediated signalling
    IRS-mediated signalling

    5 PharmGKB Pathways for KRAS
        Bisphosphonate Pathway, Pharmacodynamics
    EGFR Inhibitor Pathway, Pharmacodynamics
    Sorafenib Pharmacodynamics
    VEGF Signaling Pathway
    Vemurafenib Pathway, Pharmacodynamics

    5/36         Kegg Pathways  (Kegg details for KRAS) (see all 36):
        MAPK signaling pathway
    ErbB signaling pathway
    Chemokine signaling pathway
    Dorso-ventral axis formation
    Axon guidance


    KRAS for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for KRAS

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/80 Interacting proteins for KRAS (P011161, 2, 3 ENSP000002560784) via UniProtKB, MINT, STRING, and/or I2D (see all 80)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    CCT7Q998322, 3, ENSP000002580914MINT-8259252 I2D: score=2 STRING: ENSP00000258091
    EEF1A1P681042, 3, ENSP000003300544MINT-8259263 I2D: score=2 STRING: ENSP00000330054
    IGSF21Q96ID52, 3, ENSP000002512964MINT-8259274 I2D: score=2 STRING: ENSP00000251296
    PDE4DIPQ5VU432, 3MINT-8259285 I2D: score=2 
    DEAF1O753982, 3MINT-8258478 I2D: score=1 
    About this table

    Gene Ontology (GO): 5/28 biological process terms (GO ID links to tree view) (see all 28):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000165MAPK cascade TAS--
    GO:0000186activation of MAPKK activity TAS--
    GO:0001934positive regulation of protein phosphorylation IMP--
    GO:0007173epidermal growth factor receptor signaling pathway TAS--
    GO:0007264small GTPase mediated signal transduction TAS--

    KRAS for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    KRAS for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for KRAS

    1 HMDB Compound for KRAS    About this table
    CompoundSynonyms CAS #PubMed Ids
    Guanosine triphosphate5'-GTP (see all 10)86-01-1--

    3 DrugBank Compounds for KRAS    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    FARNESYL-- --target--10592235
    FARNESYL DIPHOSPHATE-- --target--10592235
    [(3,7,11-TRIMETHYL-DODECA-2,6,10-TRIENYLOXYCARBAMOYL)-METHYL]-PHOSPHONIC ACID-- --target--10592235

    10/37 Novoseek chemical compound relationships for KRAS gene (see all 37)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    panitumumab 92.6 77 20481659 (4), 20044619 (3), 20130433 (3), 19806185 (3) (see all 42)
    cetuximab 91.6 159 20010090 (5), 16618717 (4), 19398573 (4), 18577988 (4) (see all 72)
    erlotinib 84.3 23 15696205 (3), 18626007 (3), 16043828 (2), 19447865 (2) (see all 13)
    gefitinib 81.3 28 15696205 (3), 18334834 (3), 18418018 (3), 17409929 (2) (see all 16)
    crcs 80.3 21 19474002 (4), 19147861 (3), 19679400 (2), 19678923 (1) (see all 12)
    irinotecan 65.3 18 19398573 (3), 19164213 (3), 19179548 (2), 19546597 (1) (see all 9)
    oxaliplatin 63.1 5 19581179 (1), 20146801 (1), 19884549 (1), 20397915 (1)
    tyrosine 59.9 31 18776048 (3), 19855375 (2), 15753357 (1), 20080496 (1) (see all 28)
    o6-methylguanine 56.2 5 19164452 (1), 17867575 (1), 18300810 (1), 16118624 (1) (see all 5)
    pd-184352 54.7 1 16957420 (1)

    2 PharmGKB related drug/compound annotations for KRAS gene    About this table
    Drug/compound PharmGKB Annotation
    cetuximabDL  
    panitumumabDL  
    Search CenterWatch for drugs/clinical trials and news about KRAS / RASK 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for KRAS gene (2 alternative transcripts): 
    NM_004985.3  NM_033360.2  

    Unigene Cluster for KRAS:

    V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog
    Hs.505033  [show with all ESTs]
    Unigene Representative Sequence: NM_033360
    4 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000311936(uc001rgp.1 uc001rgq.1) ENST00000557334 ENST00000256078
    ENST00000556131(uc001rgr.3)

    miRNA
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    OriGene 3'-UTR Clone (see all 2): KRAS
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat KRAS
    8/122 QIAGEN miScript miRNA Assays for microRNAs that regulate KRAS (see all 122):
    hsa-miR-323-3p hsa-miR-193a-3p hsa-miR-300 hsa-miR-15a hsa-miR-134 hsa-miR-605 hsa-miR-30d hsa-miR-3653
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for KRAS (see all 7)
    OriGene shRNA RFP: KRAS
    OriGene siRNA: KRAS
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat KRAS
    Sirion Biotech Custom design and validation of potent shRNA sequences against KRAS 
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for KRAS (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for KRAS (see all 2)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript Custom all cDNA clones Services for KRAS
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for KRAS
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat KRAS 
    Primer
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    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for KRAS
    Browse OriGene validated miRNA SYBR primer pairs
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat KRAS
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat KRAS

    Additional cDNA sequence: 

    AF493917.1 AK292510.1 BC010502.1 BC013572.2 BC029545.1 BT007153.1 M17087.1 M35504.1 
    M35505.1 

    17 DOTS entries:

    DT.92460446  DT.99948002  DT.92460454  DT.95114183  DT.95114192  DT.100696548  DT.92008862  DT.121177012 
    DT.100811094  DT.100705577  DT.100696549  DT.100755557  DT.100810349  DT.95114240  DT.95205786  DT.95249640 
    DT.100701816 

    24/280 AceView cDNA sequences (see all 280):

    BG261289 CR625034 BE464958 W21091 NM_033360 C01015 BF436494 AL553212 
    AA808271 AW167917 AI015987 AI281159 AA281094 AA564243 NM_004985 BU189436 
    AW160515 AI889481 BQ423435 AW173466 AA721296 AA287927 AA356548 AI500024 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    KRAS expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: AACTGTACTA
    KRAS Expression
    About this image

    KRAS expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    4 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    LiverLiver BudHepatoblastsLiver
    LiverLiver LobuleFetal HepatocytesLiver
    LiverLiver LobuleHepatocytesLiver
    LiverLiver LobuleMature HepatocytesLiver
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See KRAS Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for KRAS

    SOURCE GeneReport for Unigene cluster: Hs.505033
        SABiosciences Expression via Pathway-Focused PCR Arrays including KRAS (see all 13): 
              mTOR Signaling in human mouse rat
              Oncogenes & Tumor Suppressor Genes in human mouse rat
              Lung Cancer in human mouse rat
              Insulin Signaling Pathway in human mouse rat
              VEGF Signaling in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals and fungi.

    Orthologs for KRAS gene from 7/24 species (see all 24)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves KRAS1 v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 90.43(n)
    98.94(a)
      418207  XM_416436.3  XP_416436.1 
    lizard
    (Anolis carolinensis)
    Reptilia KRAS6
    --
    94(a)
    1 ↔ 1
    GL344156.1(55258-86337)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.249802 X.laevis mRNA for proto-oncogene K-Ras2A 81.16(n)    Y12715.1 
    zebrafish
    (Danio rerio)
    Actinopterygii kras1 v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 79.43(n)
    96.28(a)
      445289  NM_001003744.1  NP_001003744.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Ras85D1 Ras oncogene at 85D 67.73(n)
    79.79(a)
      41140  NM_057351.4  NP_476699.1 
    worm
    (Caenorhabditis elegans)
    Secernentea let-601 Protein LET-60 67.57(n)
    79.35(a)
      178104  NM_069812.2  NP_502213.3 
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes RAS11 Ras1p 60.91(n)
    64.2(a)
      854268   NP_014744.1 


    ENSEMBL Gene Tree for KRAS (if available)
    TreeFam Gene Tree for KRAS (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for KRAS gene
    REM12  RALA2  RIT22  RIT12  RRAS2  ERAS2  RALB2  NRAS2  
    RRAD2  REM22  GEM2  RRAS22  HRAS2  MRAS2  
    18/89 SIMAP similar genes for KRAS using alignment to 30 protein entries:     RASK_HUMAN (see all proteins) (see all similar genes):
    N-ras    K-RAS    c-bas/has    HRAS    H-RAS    K-ras
    NRAS    RAP1B    RALA    RAP2A    RIT2    RRAS2
    RALB    RIT1    DKFZp547A0616    RERG    RAP1A    RHEB

    KRAS for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for KRAS
    PGOHUM00000250209


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/836 NCBI SNPs in KRAS are shown (see all 836    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 12 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1048943601,2
    Cpathogenic25133552(-) TGTTGA/TTGATG 3 D V mis1 ut310--------
    rs1048943671,2
    Cpathogenic25133555(-) GGGTGG/TTGATG 3 G V mis1 ut310--------
    rs1048943591,2
    Cpathogenic25150959(-) CAGCAA/C/GGTCAA 6 S R G mis10--------
    rs1048943641,2
    Cpathogenic25150964(-) CGACAC/TAGCAG 4 T I mis10--------
    rs1048943661,2
    Cpathogenic25168843(-) TGATCC/GAACAA 4 P R mis10--------
    rs1048943651,2
    Cpathogenic25168904(-) GTGGCG/ATAGGC 4 /I /V mis11Minor allele frequency- A:0.00NA 4522
    rs1048943611,2
    Cpathogenic25168929(-) TATAAA/TCTTGT 4 K N mis10--------
    rs178510451,2
    Cother25150954(-) GGTCAA/C/TGAGGA 6 Q H mis1 ese32NA 4
    rs1219132401,2
    Cother25150955(-) AGGTCA/C/G/
            
    AGAGG
    8 Q P R L mis10--------
    rs1219132381,2
    Cother25150956(-) CAGGTA/C/GAAGAG 6 K Q E mis10--------

    HapMap Linkage Disequilibrium report for KRAS (25357723 - 25403870 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for KRAS: --
    Human Gene Mutation Database (HGMD): KRAS

    5/29 SABiosciences Cancer Mutation PCR Assays for KRAS (see all 29):
    Cosmic IdAA Change
    549p.Q61K
    528p.G13S
    546p.A59T
    534p.G13V
    553p.Q61L
    5/33 SABiosciences Cancer Mutation PCR Arrays containing KRAS (see all 33):
    Breast Cancer
    Cancer Comprehensive Panel 384HT
    Lung Cancer
    Liver Cancer
    2 SABiosciences qBiomarker Copy Number PCR Arrays containing KRAS:
    Oncogenes & Tumor Suppressor Genes 384HC
    Lung Cancer
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing KRAS
    DNA2.0 Custom Variant and Variant Library Synthesis for KRAS

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    KRAS for disorders           About GeneDecksing

    OMIM gene information: 190070   
    OMIM disorders: 211980  109800  114480  260350  137215  609942  115150  
    UniProtKB/Swiss-Prot: RASK_HUMAN, P01116
  • Defects in KRAS are a cause of acute myelogenous leukemia (AML) [MIM:601626]. AML is a malignant disease in
  • which hematopoietic precursors are arrested in an early stage of development
  • Defects in KRAS are a cause of juvenile myelomonocytic leukemia (JMML) [MIM:607785]. JMML is a pediatric
  • myelodysplastic syndrome that constitutes approximately 30% of childhood cases of myelodysplastic syndrome (MDS) and
    2% of leukemia. It is characterized by leukocytosis with tissue infiltration and in vitro hypersensitivity of myeloid
    progenitors to granulocyte-macrophage colony stimulating factor
  • Defects in KRAS are the cause of Noonan syndrome type 3 (NS3) [MIM:609942]. Noonan syndrome (NS) [MIM:163950]
  • is a disorder characterized by dysmorphic facial features, short stature, hypertelorism, cardiac anomalies, deafness,
    motor delay, and a bleeding diathesis. It is a genetically heterogeneous and relatively common syndrome, with an
    estimated incidence of 1 in 1000-2500 live births. Rarely, NS is associated with juvenile myelomonocytic leukemia
    (JMML). NS3 inheritance is autosomal dominant
  • Defects in KRAS are a cause of gastric cancer (GASC) [MIM:613659]; also called gastric cancer intestinal or
  • stomach cancer. Gastric cancer is a malignant disease which starts in the stomach, can spread to the esophagus or the
    small intestine, and can extend through the stomach wall to nearby lymph nodes and organs. It also can metastasize to
    other parts of the body. The term gastric cancer or gastric carcinoma refers to adenocarcinoma of the stomach that
    accounts for most of all gastric malignant tumors. Two main histologic types are recognized, diffuse type and
    intestinal type carcinomas. Diffuse tumors are poorly differentiated infiltrating lesions, resulting in thickening of
    the stomach. In contrast, intestinal tumors are usually exophytic, often ulcerating, and associated with intestinal
    metaplasia of the stomach, most often observed in sporadic disease
  • Note=Defects in KRAS are a cause of pylocytic astrocytoma (PA). Pylocytic astrocytomas are neoplasms of the
  • brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and
    malignant tumors
  • Defects in KRAS are a cause of cardiofaciocutaneous syndrome (CFC syndrome) [MIM:115150]; also known as
  • cardio-facio-cutaneous syndrome. CFC syndrome is characterized by a distinctive facial appearance, heart defects and
    mental retardation. Heart defects include pulmonic stenosis, atrial septal defects and hypertrophic cardiomyopathy.
    Some affected individuals present with ectodermal abnormalities such as sparse, friable hair, hyperkeratotic skin
    lesions and a generalized ichthyosis-like condition. Typical facial features are similar to Noonan syndrome. They
    include high forehead with bitemporal constriction, hypoplastic supraorbital ridges, downslanting palpebral fissures,
    a depressed nasal bridge, and posteriorly angulated ears with prominent helices. The inheritance of CFC syndrome is
    autosomal dominant
  • Note=KRAS mutations are involved in cancer development

  • 20/169 diseases for KRAS (see all 169):    About MalaCards
    carcinoma    cronkhite-canada syndrome    lung adenocarcinoma    adenocarcinoma
    mutyh-associated polyposis    monoclonal gammopathy of undetermined significance    tick-borne encephalitis    murray valley encephalitis
    adenoma    sarcoma    familial adenomatous polyposis    juvenile myelomonocytic leukemia
    pseudomyxoma peritonei    squamous cell carcinoma    non-small cell lung carcinoma    noonan syndrome
    pulmonic stenosis    myelomonocytic leukemia    serous cystadenoma    bone marrow cancer

    20/22 diseases from the University of Copenhagen DISEASES database for KRAS (see all 22):
    Colorectal cancer     Carcinoma     Lung cancer     Pancreatic cancer
    Adenoma     Hepatitis C     Hepatitis     Melanoma
    Leukemia     Noonan syndrome     Pancreatitis     Endometrial cancer
    Familial adenomatous polyposis     Gallbladder cancer     Hepatocellular carcinoma     Yellow fever
    Ovarian cancer     Lynch syndrome     Liver cirrhosis     Dengue disease

    10/94 Novoseek disease relationships for KRAS gene (see all 94)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    microsatellite instability 87.1 85 9921983 (3), 16429393 (3), 15118616 (2), 15481028 (2) (see all 71)
    colorectal cancer 85.2 250 15069679 (5), 19712476 (4), 19832985 (4), 19515263 (4) (see all 99)
    somatic mutations 80.8 42 19959798 (2), 10545700 (1), 15781646 (1), 17047397 (1) (see all 37)
    nsclc 80.6 205 19787214 (6), 19789349 (6), 14601056 (6), 20145159 (5) (see all 77)
    adenocarcinoma lung 78.4 68 9645349 (3), 15696205 (3), 19855375 (3), 9332768 (3) (see all 36)
    adenocarcinoma 75.5 110 14511407 (4), 18075308 (4), 14724583 (4), 17360030 (4) (see all 61)
    tumors 75.3 615 20145159 (5), 12893203 (5), 20010090 (5), 9921983 (5) (see all 99)
    juvenile myelomonocytic leukemia 74.8 6 20471511 (1), 19066392 (1), 18561174 (1), 17332249 (1) (see all 5)
    colorectal tumors 73.5 20 18602919 (3), 20020061 (2), 18259212 (2), 18632722 (1) (see all 16)
    cancer lung 72.9 79 20108024 (3), 17510423 (3), 12606951 (2), 18927287 (2) (see all 52)

    GeneTests: KRAS
    Costello Syndrome
    Cardiofaciocutaneous Syndrome
    Noonan Syndrome

    Genetic Association Database (GAD): KRAS
    Human Genome Epidemiology (HuGE) Navigator: KRAS (400 documents)

    Export disorders for KRAS gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for KRAS gene, integrated from 9 sources (see all 1601):
    (articles sorted by number of sources associating them with KRAS)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Distinct epidermal growth factor receptor and KRAS mutation patterns in non-small cell lung cancer patients with different tobacco exposure and clinicopathologic features. (PubMed id 16533793)1, 2, 9 Tam I.Y.S.... Wong M.P. (2006)
    2. Determination of TP53 mutation is more relevant than microsatellite instability status for the prediction of disease-free survival in adjuvant-treated stage III colon cancer patients. (PubMed id 16110022)1, 4, 9 Westra J.L....Plukker J.T. (2005)
    3. BRAF mutation in endometrial carcinoma and hyperplasi a: correlation with KRAS and p53 mutations and mismatch repair protein expressi on. (PubMed id 16144912)1, 4, 9 Feng Y.Z....Konishi I. (2005)
    4. Mutations in the epidermal growth factor receptor and in KRAS are predictive and prognostic indicators in patients with non-small-cell lung cancer treated with chemotherapy alone and in combination with erlotinib. (PubMed id 16043828)1, 4, 9 Eberhard D.A....Hillan K.J. (2005)
    5. The prevalence of PIK3CA mutations in gastric and colon cancer. (PubMed id 15994075)1, 4, 9 Velho S....Seruca R. (2005)
    6. BRAF and KRAS mutations in stomach cancer. (PubMed id 14534542)1, 2, 9 Lee S.H....Yoo N.J. (2003)
    7. Population-based mapping of pulmonary adenoma susceptibility 1 locus. (PubMed id 11016621)1, 4, 9 Dragani T.A....Nagao M. (2000)
    8. Regulation of RAS oncogenicity by acetylation. (PubMed id 22711838)1, 2 Yang M.H....Haigis K.M. (2012)
    9. Germline KRAS mutations cause aberrant biochemical and physical properties leading to developmental disorders. (PubMed id 20949621)1, 2 Gremer L.... Ahmadian M.R. (2011)
    10. Craniosynostosis in patients with Noonan syndrome caused by germline KRAS mutations. (PubMed id 19396835)1, 2 Kratz C.P....Zenker M. (2009)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 3845 HGNC: 6407 AceView: KRAS2 Ensembl:ENSG00000133703 euGenes: HUgn3845
    ECgene: KRAS Kegg: 3845 H-InvDB: KRAS

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for KRAS Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for KRAS Genetics and Cytogenetics in Oncology and Haematology
    GeneReviewshttp://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/KRAS
    SHMPDhttp://shmpd.bii.a-star.edu.sg/gene.php?genestart=A&genename=KRAS

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for KRAS gene:
    Search GeneIP for patents involving KRAS

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
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    About This Section

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