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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

KPNA4 Gene

protein-coding   GIFtS: 59
GCID: GC03M160212

karyopherin alpha 4 (importin alpha 3)

 Explore 4 diseases affiliated with
KPNA4 via our new
 Human Malady Compendium 
Biological research products
for KPNA4
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Karyopherin Alpha 4 (Importin Alpha 3)1 2     Karyopherin Subunit Alpha-42 3
QIP11 2 3 5     MGC122171
IPOA31 2     MGC267031
SRP31 2     Importin Subunit Alpha-42
Importin Alpha Q12 3     Qip13

External Ids:    HGNC: 63971   Entrez Gene: 38402   Ensembl: ENSG000001864327   OMIM: 6029705   UniProtKB: O006293   

Export aliases for KPNA4 gene to outside databases

Previous GC identifers: GC03M157685 GC03M161165 GC03M161499 GC03M161538 GC03M161700 GC03M157616


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for KPNA4:
The nuclear import of karyophilic proteins is directed by short amino acid sequences termed nuclear localization
signals (NLSs). Karyopherins, or importins, are cytoplasmic proteins that recognize NLSs and dock NLS-containing
proteins to the nuclear pore complex. The protein encoded by this gene shares the sequence similarity with Xenopus
importin-alpha and Saccharomyces cerevisiae Srp1. This protein is found to interact with the NLSs of DNA helicase Q1
and SV40 T antigen. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: IMA4_HUMAN, O00629
Function: Functions in nuclear protein import as an adapter protein for nuclear receptor KPNB1. Binds specifically and
directly to substrates containing either a simple or bipartite NLS motif. Docking of the importin/substrate complex to
the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is
subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side
of the NPC, Ran binds to importin-beta and the three components separate and importin-alpha and -beta are re-exported
from the nucleus to the cytoplasm where GTP hydrolysis releases Ran from importin. The directionality of nuclear
import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the
cytoplasm and nucleus. In vitro, mediates the nuclear import of human cytomegalovirus UL84 by recognizing a
non-classical NLS. In vitro, mediates the nuclear import of human cytomegalovirus UL84 by recognizing a non-classical
NLS

Gene Wiki entry for KPNA4


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000003.11  NC_018914.1  NT_005612.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the KPNA4 gene promoter:
         AhR   CBF-C   Arnt   HEN1   CREB   CBF-B   CBF-A   deltaCREB   CP1A   CBF(2)   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidKPNA4 promoter sequence
   Search SABiosciences Chromatin IP Primers for KPNA4

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat KPNA4


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 3q25.33   Ensembl cytogenetic band:  3q25.33   HGNC cytogenetic band: 3q25.33

KPNA4 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
KPNA4 gene location

GeneLoc information about chromosome 3         GeneLoc Exon Structure

GeneLoc location for GC03M160212:  view genomic region     (about GC identifiers)

Start:
160,212,783 bp from pter      End:
160,283,376 bp from pter
Size:
70,594 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: IMA4_HUMAN, O00629 (See protein sequence)
Recommended Name: Importin subunit alpha-4  
Size: 521 amino acids; 57887 Da
Subunit: Forms a complex with importin subunit beta-1. Interacts with SNAI1
Subcellular location: Cytoplasm (By similarity). Nucleus (By similarity)
Caution: Was termed (PubMed:9395085) importin alpha-3
Secondary accessions: A8K4S6 D3DNM2 O00190

Explore the universe of human proteins at neXtProt for KPNA4: NX_O00629

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O00629

  • KPNA4 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_002259.1  
    ENSEMBL proteins: 
     ENSP00000334373   ENSP00000417172  
    Reactome Protein details: O00629
    Human Recombinant Protein Products: 
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    Novus Biologicals KPNA4 Proteins
    Novus Biologicals KPNA4 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Browse Proteins at Uscn

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005654nucleoplasm TAS--
    GO:0005829cytosol TAS--


    KPNA4 for ontologies           About GeneDecksing



    KPNA4 Antibody Products: 
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    Browse ELISAs and CLIAs at Uscn


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    KPNA4 for domains           About GeneDecksing

    5 InterPro domains/families:
     IPR011989 ARM-like
     IPR000225 Armadillo
     IPR024931 Importing_su_alpha
     IPR002652 Importin-a_IBB
     IPR016024 ARM-type_fold

    Graphical View of Domain Structure for InterPro Entry O00629

    ProtoNet protein and cluster: O00629

    2 Blocks protein families:
    IPB000225 Armadillo repeat
    IPB002652 Importin alpha-like protein


    UniProtKB/Swiss-Prot: IMA4_HUMAN, O00629
    Domain: Consists of an N-terminal hydrophilic region, a hydrophobic central region composed of 10 repeats, and a short
    hydrophilic C-terminus. The N-terminal hydrophilic region contains the importin beta binding domain (IBB domain),
    which is sufficient for binding importin beta and essential for nuclear protein import
    Domain: The IBB domain is thought to act as an intrasteric autoregulatory sequence by interacting with the internal
    autoinhibitory NLS. Binding of KPNB1 probably overlaps the internal NLS and contributes to a high affinity for
    cytoplasmic NLS-containing cargo substrates. After dissociation of the importin/substrate complex in the nucleus the
    internal autohibitory NLS contributes to a low affinity for nuclear NLS-containing proteins (By similarity)
    Domain: The major and minor NLS binding sites are mainly involved in recognition of simple or bipartite NLS motifs.
    Structurally located within in a helical surface groove they contain several conserved Trp and Asn residues of the
    corresponding third helices (H3) of ARM repeats which mainly contribute to binding (By similarity)
    Similarity: Belongs to the importin alpha family
    Similarity: Contains 10 ARM repeats
    Similarity: Contains 1 IBB domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: IMA4_HUMAN, O00629
    Function: Functions in nuclear protein import as an adapter protein for nuclear receptor KPNB1. Binds specifically and
    directly to substrates containing either a simple or bipartite NLS motif. Docking of the importin/substrate complex to
    the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is
    subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side
    of the NPC, Ran binds to importin-beta and the three components separate and importin-alpha and -beta are re-exported
    from the nucleus to the cytoplasm where GTP hydrolysis releases Ran from importin. The directionality of nuclear
    import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the
    cytoplasm and nucleus. In vitro, mediates the nuclear import of human cytomegalovirus UL84 by recognizing a
    non-classical NLS. In vitro, mediates the nuclear import of human cytomegalovirus UL84 by recognizing a non-classical
    NLS

    miRNA
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    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat KPNA4
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    hsa-miR-124* hsa-miR-579 hsa-miR-26a-2* hsa-miR-361-5p hsa-miR-376b hsa-miR-502-3p hsa-miR-761 hsa-miR-509-3-5p
    SwitchGear 3'UTR luciferase reporter plasmidKPNA4 3' UTR sequence
    Inhib. RNA
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    Gene Editing
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for KPNA4

    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding ----
    GO:0008565protein transporter activity IEA--


    KPNA4 for ontologies           About GeneDecksing


    2 GenomeRNAi human phenotypes for KPNA4:
     Increased circadian period len  Increased homologous recombina 

    Animal Models:
         Mouse knock-out Kpna4tm1Bdr for KPNA4
         1 MGI mutant phenotype (inferred from 1 allele(MGI details for Kpna4):
     normal 

    KPNA4 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/7 super-pathways (see all 7About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Translocation of Influenza A virus nonstructural protein 1 (NS1A) into the nucleus
    Translocation of Influenza A virus nonstructural protein 1 (NS1A) into the nucleus1.00
    ISG15 antiviral mechanism0.49
    Antiviral mechanism by IFN-stimulated genes0.49
    2Cell cycle_Spindle assembly and chromosome separation
    Cell cycle_Spindle assembly and chromosome separation1.00
    Cell cycle Spindle assembly and chromosome separation0.94
    3Cytokine Signaling in Immune system
    Cytokine Signaling in Immune system1.00
    Interferon Signaling0.61
    4Immune System
    Immune System1.00
    5Ran Pathway
    Ran Pathway1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for KPNA4
        Cell cycle Spindle assembly and chromosome separation

    2 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for KPNA4
        Ran Pathway
    NFAT in Immune Response

    1 GeneGo (Thomson Reuters) Pathway for KPNA4
        Cell cycle Spindle assembly and chromosome separation

    1 BioSystems Pathway for KPNA4 
        Leptin signaling pathway

    5/6        Reactome Pathways for KPNA4 (see all 6)
        Antiviral mechanism by IFN-stimulated genes
    Cytokine Signaling in Immune system
    Interferon Signaling
    Translocation of Influenza A virus nonstructural protein 1 (NS1A) into the nucleus
    ISG15 antiviral mechanism



    KPNA4 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for KPNA4

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/49 Interacting proteins for KPNA4 (O006292, 3 ENSP000003343734) via UniProtKB, MINT, STRING, and/or I2D (see all 49)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    RECQLP460632, 3, ENSP000003954494MINT-6733224 MINT-6733208 I2D: score=3 STRING: ENSP00000395449
    NFKB1P198382, 3MINT-48651 MINT-48538 I2D: score=1 
    H3F3AP842433, ENSP000003557784I2D: score=1 STRING: ENSP00000355778
    MYCP011063, ENSP000003672074I2D: score=3 STRING: ENSP00000367207
    ARRB2P321213, ENSP000002692604I2D: score=2 STRING: ENSP00000269260
    About this table

    Gene Ontology (GO): 3 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006606protein import into nucleus ----
    GO:0006607NLS-bearing substrate import into nucleus TAS9395085
    GO:0019221cytokine-mediated signaling pathway TAS--


    KPNA4 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for KPNA4

    1 HMDB Compound for KPNA4    About this table
    CompoundSynonyms CAS #PubMed Ids
    Guanosine triphosphate5'-GTP (see all 10)86-01-1--
    Search CenterWatch for drugs/clinical trials and news about KPNA4 / IMA4 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for KPNA4 gene: 
    NM_002268.4  

    Unigene Cluster for KPNA4:

    Karyopherin alpha 4 (importin alpha 3)
    Hs.467866  [show with all ESTs]
    Unigene Representative Sequence: NM_002268
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000334256(uc003fdn.3) ENST00000483437 ENST00000469804

    miRNA
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    8/263 QIAGEN miScript miRNA Assays for microRNAs that regulate KPNA4 (see all 263):
    hsa-miR-124* hsa-miR-579 hsa-miR-26a-2* hsa-miR-361-5p hsa-miR-376b hsa-miR-502-3p hsa-miR-761 hsa-miR-509-3-5p
    SwitchGear 3'UTR luciferase reporter plasmidKPNA4 3' UTR sequence
    Inhib. RNA
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat KPNA4
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat KPNA4

    Additional cDNA sequence: 

    AB002533.2 AF038199.1 AK021602.1 AK055675.1 AK129841.1 AK291041.1 BC007458.1 BC016754.1 
    BC028691.2 BC034493.2 BC052814.1 U93240.1 Y12393.1 

    12 DOTS entries:

    DT.91745423  DT.212079  DT.100045760  DT.121380979  DT.120841991  DT.95200464  DT.97868536  DT.100699562 
    DT.91980648  DT.91982676  DT.95077320  DT.100729944 

    24/310 AceView cDNA sequences (see all 310):

    W80392 AI827407 BQ694698 BU753004 BC007458 U93240 AA894455 BE932744 
    F06764 BQ024536 AA044281 AA731347 BC028691 BM982525 BQ127900 BQ024334 
    AI190898 AW168295 AW263745 BM467072 AA393851 AK129841 BQ549939 AA565781 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    KPNA4 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GTTAAAGTTT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See KPNA4 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for KPNA4

    SOURCE GeneReport for Unigene cluster: Hs.467866

    UniProtKB/Swiss-Prot: IMA4_HUMAN, O00629
    Tissue specificity: Highly expressed in testis, ovary, small intestine, heart, skeletal muscle, lung and pancreas, but
    barely detectable in kidney, thymus, colon and peripheral blood leukocytes

        SABiosciences Custom PCR Arrays for KPNA4
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for KPNA4

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for KPNA4 gene from 7/26 species (see all 26)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves KPNA41 karyopherin alpha 4 (importin alpha 3) 87.65(n)
    99.04(a)
      425012  NM_001007963.1  NP_001007964.1 
    lizard
    (Anolis carolinensis)
    Reptilia --
    KPNA46
    --
    94(a)
    89(a)
    1 ↔ 1
    possible ortholog
    3(12949957-12972623)
    5(98814482-98815299)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.96312 Xenopus laevis transcribed sequence with strong similarity more 87.35(n)    BU907934.1 
    zebrafish
    (Danio rerio)
    Actinopterygii BC045358.12   -- 77.54(n)   327373  BC045358.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Kap-alpha31 , 3 protein-nucleus import protein carrier3
    karyopherin alpha31
    67(a)
    (best of 4)3
    61.62(n)1
    68.13(a)1
      85D253
    411581  NM_001170101.11  NP_001163572.11 
    worm
    (Caenorhabditis elegans)
    Secernentea ima-31 , 3 importin alpha, nuclear transport factor3
    Protein IMA-31
    63(a)
    (best of 2)3
    62.52(n)1
    66.24(a)1
      IV(7559979-7561848)3
    1775331  NM_068826.31  NP_501227.11 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT1G328806
    armadillo/beta-catenin-like repeats-containing pro...
    32(a)
    1 → many
    1(11913928-11914735)


    ENSEMBL Gene Tree for KPNA4 (if available)
    TreeFam Gene Tree for KPNA4 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for KPNA4 gene
    KPNA32  KPNA72  SPAG62  KPNA52  KPNA22  KPNA12  KPNA62  
    6 SIMAP similar genes for KPNA4 using alignment to 4 protein entries:     IMA4_HUMAN (see all proteins):
    KPNA3    KPNA2    KPNA7    KPNA5    KPNA1    KPNA6

    KPNA4 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for KPNA4
    PGOHUM00000241350


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1068 NCBI SNPs in KPNA4 are shown (see all 1068    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 3 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1473360581,2
    --160212436(+) TCTTAC/TTATAA 1 -- ds50010--------
    rs1878093051,2
    --160212452(+) TTCAAA/TAAATC 1 -- ds50010--------
    rs46798891,2
    C,F,A,--160212479(+) CAAAAT/AATAAA 1 -- ds50019Minor allele frequency- A:0.44NA WA CSA EA 370
    rs1165992411,2
    --160212694(+) CTATCG/AAAGGC 1 -- ds50011Minor allele frequency- A:0.01WA 118
    rs1932686751,2
    --160212743(+) TGTAGA/GTTGAA 1 -- ds50010--------
    rs1140775851,2
    --160212790(+) AGAAAT/CTGCAT 1 -- ut311Minor allele frequency- C:0.01WA 118
    rs1487928971,2
    --160212873(+) TATGCC/TGACCT 1 -- ut310--------
    rs1176681831,2
    F,--160212876(+) GCCGAC/TCTTGC 1 -- ut311Minor allele frequency- T:0.03EA 120
    rs1823839211,2
    --160212904(+) TCTAGC/TGGAAA 1 -- ut310--------
    rs1424189131,2
    --160212905(+) CTAGTG/TGAAAG 1 -- ut310--------

    HapMap Linkage Disequilibrium report for KPNA4 (160212783 - 160283376 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for KPNA4
         1 CNV: 63635

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    KPNA4 for disorders           About GeneDecksing

    OMIM gene information: 602970    OMIM disorders: --

    4 diseases for KPNA4:    About MalaCards
    sost-related sclerosing bone dysplasia    hermaphroditism    immunodeficiency    malaria


    Export disorders for KPNA4 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for KPNA4 gene, integrated from 9 sources (see all 96):
    (articles sorted by number of sources associating them with KPNA4)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Cloning of a cDNA encoding a novel importin-alpha homologue, Qip1: discrimination of Qip1 and Rch1 from hSrp1 by their ability to interact with DNA helicase Q1/RecQL. (PubMed id 9168958)1, 2, 3, 9 Seki T.... Enomoto T. (1997)
    2. Cloning of two novel human importin-alpha subunits and analysis of the expression pattern of the importin-alpha protein family. (PubMed id 9395085)1, 2, 3 Kohler M....Hartmann E. (1997)
    3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    5. A nonconventional nuclear localization signal within the UL84 protein of human cytomegalovirus mediates nuclear import via the importin alpha/beta pathway. (PubMed id 12610148)1, 2 Lischka P.... Stamminger T. (2003)
    6. Assignment of KPNA4 and KPNB1 encoding karyopherin alpha 4 and beta 1 to human chromosome bands 11q22 and 17q21 respectively, by in situ hybridization. (PubMed id 10965137)1, 9 Ayala-Madrigal M.L....Hansmann I. (2000)
    7. A high-throughput approach for measuring temporal chan ges in the interactome. (PubMed id 22863883)1 Kristensen A.R....Foster L.J. (2012)
    8. Cellular cofactors of lentiviral integrase: from targe t validation to drug discovery. (PubMed id 22928108)1 Taltynov O....Debyser Z. (2012)
    9. The HIV-1 passage from cytoplasm to nucleus: the proce ss involving a complex exchange between the components of HIV-1 and cellular mac hinery to access nucleus and successful integration. (PubMed id 22509482)1 Jayappa K.D....Yao X. (2012)
    10. 14-3-3 checkpoint regulatory proteins interact specif ically with DNA repair protein human exonuclease 1 (hEXO1) via a semi-conserved motif. (PubMed id 22222486)1 Andersen S.D....Rasmussen L.J. (2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
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    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 3840 HGNC: 6397 AceView: KPNA4 Ensembl:ENSG00000186432 euGenes: HUgn3840
    ECgene: KPNA4 H-InvDB: KPNA4

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for KPNA4 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for KPNA4 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for KPNA4 gene:
    Search GeneIP for patents involving KPNA4

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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