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Aliases for KMT2E-AS1 Gene

Subcategory (RNA class) for KMT2E-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KMT2E-AS1 Gene

  • KMT2E Antisense RNA 1 (Head To Head) 2 3 5

External Ids for KMT2E-AS1 Gene

Previous GeneCards Identifiers for KMT2E-AS1 Gene

  • GC07M104652

Summaries for KMT2E-AS1 Gene

GeneCards Summary for KMT2E-AS1 Gene

KMT2E-AS1 (KMT2E Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KMT2E-AS1 Gene

Genomics for KMT2E-AS1 Gene

Regulatory Elements for KMT2E-AS1 Gene

Enhancers for KMT2E-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G104976 2 FANTOM5 Ensembl ENCODE dbSUPER 13 +32.3 32321 10.8 CREB3L1 AGO1 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 MEF2D ZNF610 KMT2E LINC01004 KMT2E-AS1 SRPK2 LOC101927902 GC07P104969
GH07G104931 1.4 Ensembl ENCODE dbSUPER 11.2 +81.2 81227 4.1 HDGF YBX1 FEZF1 ZNF121 ZNF207 MCM3 ZNF592 SMARCA4 NBN KDM1A LINC01004 ORC5 ENSG00000272918 KMT2E-AS1 ENSG00000272604 LOC101927902 LHFPL3-AS2
GH07G104882 1.4 Ensembl ENCODE 11.1 +130.1 130113 2.7 HDGF PKNOX1 MLX CREB3L1 ARNT ZFP64 WRNIP1 ARID4B SIN3A FEZF1 LINC01004 ORC5 KMT2E-AS1 RN7SL8P GC07M104825
GH07G104987 1 ENCODE dbSUPER 12.5 +24.6 24571 3.6 FOXA2 SAP130 FEZF1 ZEB1 TEAD3 GATA2 GLI2 ZNF600 KLF7 MAFK KMT2E KMT2E-AS1 LINC01004 SRPK2 GC07P104969
GH07G105292 0.9 dbSUPER 11 -278.5 -278484 0.6 HDGF ZNF473 NFRKB ZSCAN4 YBX1 ZBTB7B ZNF121 SCRT2 ZNF207 RCOR1 LINC01004 ENSG00000272604 ENSG00000272918 RNU6-1322P KMT2E-AS1 SRPK2 RWDD4P1 RPL36P12
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KMT2E-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for KMT2E-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000216278 521 8801 MLX CREB3L1 AGO1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC

Genomic Location for KMT2E-AS1 Gene

Chromosome:
7
Start:
105,010,542 bp from pter
End:
105,014,321 bp from pter
Size:
3,780 bases
Orientation:
Minus strand

Genomic View for KMT2E-AS1 Gene

Genes around KMT2E-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KMT2E-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KMT2E-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KMT2E-AS1 Gene

Proteins for KMT2E-AS1 Gene

Post-translational modifications for KMT2E-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KMT2E-AS1 Gene

Domains & Families for KMT2E-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KMT2E-AS1 Gene

Function for KMT2E-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KMT2E-AS1 Gene

Localization for KMT2E-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KMT2E-AS1 Gene

Pathways & Interactions for KMT2E-AS1 Gene

SuperPathways for KMT2E-AS1 Gene

No Data Available

Interacting Proteins for KMT2E-AS1 Gene

Gene Ontology (GO) - Biological Process for KMT2E-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KMT2E-AS1 Gene

Drugs & Compounds for KMT2E-AS1 Gene

No Compound Related Data Available

Transcripts for KMT2E-AS1 Gene

mRNA/cDNA for KMT2E-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KMT2E-AS1 Gene

No ASD Table

Relevant External Links for KMT2E-AS1 Gene

GeneLoc Exon Structure for
KMT2E-AS1
ECgene alternative splicing isoforms for
KMT2E-AS1

Expression for KMT2E-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KMT2E-AS1 Gene

genes like me logo Genes that share expression patterns with KMT2E-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KMT2E-AS1 Gene

Orthologs for KMT2E-AS1 Gene

Evolution for KMT2E-AS1 Gene

ENSEMBL:
Gene Tree for KMT2E-AS1 (if available)
TreeFam:
Gene Tree for KMT2E-AS1 (if available)

No data available for Orthologs for KMT2E-AS1 Gene

Paralogs for KMT2E-AS1 Gene

No data available for Paralogs for KMT2E-AS1 Gene

Variants for KMT2E-AS1 Gene

Sequence variations from dbSNP and Humsavar for KMT2E-AS1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000579123 -- 105,014,152(+) CACTT(-/GCCGCCGCCGCCGCCGCCGCCGCG)GCCGC upstream-variant-2KB
rs1000598175 -- 105,012,206(+) ACAGG(A/T)ATCAC nc-transcript-variant, upstream-variant-2KB
rs1001271630 -- 105,014,026(+) CCAGT(A/T)TGCTA nc-transcript-variant, upstream-variant-2KB
rs1001678645 -- 105,014,210(+) AGAGC(A/G)AGAGG nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs1003094628 -- 105,014,555(+) TCTCC(A/G)TGGGA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for KMT2E-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv436902 CNV insertion 17901297
nsv608068 CNV loss 21841781

Relevant External Links for KMT2E-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KMT2E-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for KMT2E-AS1 Gene

Disorders for KMT2E-AS1 Gene

Relevant External Links for KMT2E-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KMT2E-AS1

No disorders were found for KMT2E-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KMT2E-AS1 Gene

Publications for KMT2E-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for KMT2E-AS1 Gene

Sources for KMT2E-AS1 Gene

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