KLRG1 Gene
protein-coding GIFtS: 56
GCID: GC12P009142
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killer cell lectin-like receptor subfamily G, member 1
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Aliases
for KLRG1 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| Killer Cell Lectin-Like Receptor Subfamily G, Member 11 2 | | MAFAL3 5 | | MAFA1 2 3 5 | | MAFA-2F12 | | CLEC15A1 2 3 | | MAFA-LIKE2 | | 2F11 2 | | C-Type Lectin Domain Family 15, Member A2 | | MAFA-L1 2 | | Killer Cell Lectin-Like Receptor Subfamily G Member 12 | | C-Type Lectin Domain Family 15 Member A2 3 | | Mast Cell Function-Associated Antigen (ITIM-Containing)2 | | ITIM-Containing Receptor MAFA-L2 3 | | Mast Cell Function-Associated Antigen3 | | MAFA-Like Receptor2 3 | | |
Export aliases for KLRG1 gene to outside databasesPrevious GC identifers: GC12P008850 GC12P009290 GC12P009002 GC12P009033 GC12P008922 |
Summaries
for KLRG1 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
Entrez Gene summary for KLRG1:
Natural killer (NK) cells are lymphocytes that can mediate lysis of certain tumor cells and virus-infected cellswithout previous activation. They can also regulate specific humoral and cell-mediated immunity. The protein encodedby this gene belongs to the killer cell lectin-like receptor (KLR) family, which is a group of transmembrane proteinspreferentially expressed in NK cells. Studies in mice suggested that the expression of this gene may be regulated byMHC class I molecules. Alternatively spliced transcript variants have been reported, but their full-length natureshave not yet been determined. (provided by RefSeq, Jul 2008)
UniProtKB/Swiss-Prot: KLRG1_HUMAN, Q96E93Function: Plays an inhibitory role on natural killer (NK) cells and T-cell functions upon binding to their non-MHCligands. May mediate missing self recognition by binding to a highly conserved site on classical cadherins, enablingit to monitor expression of E-cadherin/CDH1, N-cadherin/CDH2 and R-cadherin/CDH4 on target cells
Gene Wiki entry for KLRG1
|
Genomic Views
for KLRG1 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000012.11 NC_018923.1 NT_009714.17
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the KLRG1 gene promoter:
E2F-4 E2F-3a E2F-5 E2F-1 E2F RREB-1 E2F-2
Other transcription factors
Search SABiosciences Chromatin IP Primers for KLRG1
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat KLRG1 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 12p13.31 Ensembl cytogenetic band: 12p13.31 HGNC cytogenetic band: 12p13.31KLRG1 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 12 GeneLoc Exon Structure GeneLoc location for GC12P009142: view genomic region
(about GC identifiers)
Start:
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9,102,640 bp from pter |
End:
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9,163,356 bp from pter |
Size:
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60,717 bases |
Orientation:
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plus strand |
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Proteins
for KLRG1 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: KLRG1_HUMAN, Q96E93 (See
protein sequence)Recommended Name: Killer cell lectin-like receptor subfamily G member 1 Size: 195 amino acids; 21831 Da
Subunit: Forms a monomer and homodimer; disulfide-linked (By similarity). Interacts (via ITIM motif) with PTPN11 andINPP5D (By similarity)
Subcellular location: Cell membrane; Single-pass type II membrane protein
1 PDB 3D structure from  and Proteopedia  for KLRG1:3FF7 (3D)
Secondary accessions: B7ZAM2 O43198 O75613Alternative splicing: 2 isoforms: Q96E93-1 Q96E93-2 Explore the universe of human proteins at neXtProt for KLRG1: NX_Q96E93
Post-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_Q96E93
KLRG1 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins: NP_005801.3
ENSEMBL proteins: ENSP00000445627 ENSP00000349477 ENSP00000266551 ENSP00000443658 Reactome Protein details: Q96E93
Human Recombinant Protein Products:
Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005886 | plasma membrane |
IEA | -- | | GO:0016021 | integral to membrane |
IEA | -- |
KLRG1 for ontologies About GeneDecksing
KLRG1 Antibody Products:
Assay Products for KLRG1: |
Protein
Domains /
Families
for KLRG1 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
KLRG1 for domains About GeneDecksing
3 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q96E93ProtoNet protein and cluster: Q96E93 UniProtKB/Swiss-Prot: KLRG1_HUMAN, Q96E93Domain: Contains 1 copy of a cytoplasmic motif that is referred to as the immunoreceptor tyrosine-based inhibitor motif(ITIM). This motif is involved in modulation of cellular responses. Upon phosphorylation of ITIM motif KLRG1associates with the two phosphatases PTPN11 and INPP5D (By similarity)Similarity: Contains 1 C-type lectin domain |
Function
for KLRG1 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Function Summary:
UniProtKB/Swiss-Prot: KLRG1_HUMAN, Q96E93Function: Plays an inhibitory role on natural killer (NK) cells and T-cell functions upon binding to their non-MHCligands. May mediate missing self recognition by binding to a highly conserved site on classical cadherins, enablingit to monitor expression of E-cadherin/CDH1, N-cadherin/CDH2 and R-cadherin/CDH4 on target cellsInduction: By pathogens and viruses infections Genatlas biochemistry entry for KLRG1:natural killer cell lectin-like receptor,subfamily G,member 1,in the NK (natural killer) complex (NKG2@),expressed inperipheral blood by NK cells,also expressed in most cells and basophils
Clone
Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for KLRG1 (see all 3)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for KLRG1
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
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In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for KLRG1 |
Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view): About this table
KLRG1 for ontologies About GeneDecksing
2 GenomeRNAi human phenotypes for KLRG1:
Animal Models:
1 MGI mutant phenotype (inferred from 1 allele ) (MGI details for Klrg1):
KLRG1 for phenotypes About GeneDecksing
|
Pathways & Interactions
for KLRG1 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Unified GeneCards pathways About this table
See pathways by source
| Super-pathway | contained gene-specific pathways |
|---|
| 1 | Immune System | | | 2 | Cleavage of Alpha-1-Microglobulin | |
Pathway sources
See GeneCards unified pathways
Show all pathways
3 
Reactome Pathways for KLRG1
KLRG1 for pathways About GeneDecksing
Interactions:
SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for KLRG1
STRING Interaction
Network Preview (showing 5 interactants - click image to see 9)
5/10 Interacting proteins for KLRG1 (Q96E932, 3 ENSP000003494774) via UniProtKB, MINT, STRING, and/or I2D (see all 10)About this table
Gene Ontology (GO): 5 biological process terms (GO ID links to tree view): About this table
KLRG1 for ontologies About GeneDecksing
|
Drugs & Compounds
for KLRG1 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for KLRG1
Search CenterWatch for drugs/clinical trials and news about KLRG1
|
Transcripts
for KLRG1 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for KLRG1 gene: NM_005810.3 Unigene Cluster for KLRG1: Killer cell lectin-like receptor subfamily G, member 1 Hs.558446 [show with all ESTs]Unigene Representative Sequence: NM_0058107 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000539240 ENST00000544226 ENST00000538029 ENST00000541957 ENST00000356986
ENST00000266551(uc001qvg.3 uc001qvh.3) ENST00000543895
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for KLRG1 (see all 3)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for KLRG1
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector: KLRG1 (NM_005810) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for KLRG1 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat KLRG1 |
Additional cDNA sequence: AF034952.1 AF081675.1 AF097358.1 AK301367.1 AK316337.1 BC012621.1 7 DOTS entries: DT.121125321 DT.100706717 DT.40118064 DT.97814491 DT.121125380 DT.40229521 DT.92419884 24/30 AceView cDNA sequences (see all 30): AA283705 AI803445 AA290716 AW976628 BC012621 AI433079 AA748900 NM_005810 AA186699 AF097358 BX354588 AF034952 CK001855 BX098337 AA188327 BG207005 AA308877 BI832809 BF241894 BQ212545 AI263172 BG500830 AI383074 AF081675
GeneLoc Exon Structure
|
Expression
for KLRG1 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| KLRG1 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: GACTGTATCT
About this image
See KLRG1 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for KLRG1
SOURCE GeneReport for Unigene cluster: Hs.558446
UniProtKB/Swiss-Prot: KLRG1_HUMAN, Q96E93Tissue specificity: Expressed specifically on natural killer (NK) cells and T-cells, mainly CD8 T-cells
SABiosciences Custom PCR Arrays for KLRG1
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for KLRG1
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse, rat KLRG1 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat KLRG1 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat KLRG1 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for KLRG1 |
Orthologs
for KLRG1 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
--
ENSEMBL Gene Tree for KLRG1 (if available)
TreeFam Gene Tree for KLRG1 (if available) |
Paralogs
for KLRG1 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| Paralogs for KLRG1 gene
- CLEC2A2 CLEC2L2 CLEC2B2 KLRF22 KLRG22 CD692 CLEC2D2 CLEC5A2
- KLRF12 KLRB12
13 SIMAP similar genes for KLRG1 using alignment to 3 protein entries: KLRG1_HUMAN (see all proteins):ASGR1 CLEC2L CLEC10A OLR1 CLEC2D KLRD1
KLRF1 KLRC1 KLRC2 NCAN CLEC2B CLEC4M
CLEC1B
KLRG1 for paralogs About GeneDecksing
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Genomic Variants
for KLRG1 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 12 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for KLRG1 (9102640 - 9163356 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 1 variation for KLRG1
1 CNV: 4768 | SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing KLRG1 |
|
Disorders
/ Diseases
for KLRG1 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database, Novoseek,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
KLRG1 for disorders About GeneDecksing
OMIM gene information: 604874
OMIM disorders: --
10  diseases for KLRG1: About MalaCardsmastocytosis lymphocytic choriomeningitis listeriosis myelodysplastic syndrome
hepatitis c influenza hepatitis b hepatitis
neuronitis carcinoma
6 Novoseek disease relationships for KLRG1 gene About this table
Human Genome Epidemiology (HuGE) Navigator: KLRG1 (2 documents)
Export disorders for KLRG1 gene to outside databases
|
Publications
for KLRG1 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for KLRG1 gene, integrated from 9 sources (see all 60):
(articles sorted by number of sources associating them with KLRG1) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- MAFA-L, an ITIM-containing receptor encoded by the human NK cell gene complex and expressed by basophils and NK cells. (PubMed id 9842918)1, 2, 3, 9 Butcher S....Cook G.P. (1998)
- 2F1 antigen, the mouse homolog of the rat "mast cell function- associated antigen", is a lectin-like type II transmembrane receptor expressed by natural killer cells. (PubMed id 9862378)1, 3, 9 Hanke T.... Raulet D.H. (1998)
- Tumor-associated E-cadherin mutations affect binding to the killer cell lectin-like receptor G1 in humans. (PubMed id 17617594)1, 2, 9 Schwartzkopff S.... Pircher H. (2007)
- Killer cell lectin-like receptor G1 binds three membe rs of the classical cadherin family to inhibit NK cell cytotoxicity. (PubMed id 16461340)1, 3, 9 Ito M....Matsumoto N. (2006)
- Expression of killer cell lectin-like receptor G1 on antigen-specific human CD8+ T lymphocytes during active, latent, and resolved infection and its relation with CD57. (PubMed id 15879103)1, 2, 9 Ibegbu C.C.... Kourtis A.P. (2005)
- Human MAFA has alternatively spliced variants. (PubMed id 9765598)1, 2, 9 Lamers M.B.A.C.... Williams D.H. (1998)
- Structure of natural killer cell receptor KLRG1 bound to E-cadherin reveals basis for MHC-independent missing self recognition. (PubMed id 19604491)1, 2, 9 Li Y....Mariuzza R.A. (2009)
- Increased expression of the NK cell receptor KLRG1 by virus-specific CD8 T cells during persistent antigen stimulation. (PubMed id 16140789)1, 3, 9 Thimme R....Pircher H. (2005)
- Lack of proliferative capacity of human effector and memory T cells expressing killer cell lectinlike receptor G1 (KLRG1). (PubMed id 12393723)1, 9 Voehringer D....Pircher H. (2002)
- KLRG1 signaling induces defective Akt (ser473) phosph orylation and proliferative dysfunction of highly differentiated CD8+ T cells. (PubMed id 19406987)1, 9 Henson S.M....Akbar A.N. (2009)
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External Searches for KLRG1 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing KLRG1 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing KLRG1 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing KLRG1 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
|
About This Section
| Patent Information for KLRG1 gene:
Search GeneIP for patents involving KLRG1
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for KLRG1 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section
|
 | |
 | |
 |
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| | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for KLRG1 |
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| | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat KLRG1 |
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