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Aliases for KLRA1P Gene

Aliases for KLRA1P Gene

  • Killer Cell Lectin Like Receptor A1, Pseudogene 2 3 5
  • Killer Cell Lectin-Like Receptor Subfamily A Pseudogene 1 2 3
  • Killer Cell Lectin-Like Receptor Subfamily A, Member 1, Pseudogene 3
  • Killer Cell Lectin-Like Receptor Subfamily A, Member 1 2
  • Ly-49L 3
  • KLRAP1 3
  • LY49L 3
  • KLRA1 3
  • Ly49 3

External Ids for KLRA1P Gene

Previous HGNC Symbols for KLRA1P Gene

  • KLRA1
  • KLRAP1

Previous GeneCards Identifiers for KLRA1P Gene

  • GC12M010793
  • GC12M011069
  • GC12M011360
  • GC12M011578

Summaries for KLRA1P Gene

GeneCards Summary for KLRA1P Gene

KLRA1P (Killer Cell Lectin Like Receptor A1, Pseudogene) is a Pseudogene. Among its related pathways are Immune response Role of DAP12 receptors in NK cells.

Additional gene information for KLRA1P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KLRA1P Gene

Genomics for KLRA1P Gene

Regulatory Elements for KLRA1P Gene

Enhancers for KLRA1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H010715 1.4 ENCODE dbSUPER 65.8 -120.3 -120260 8 FOXA2 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 FOS KLRA1P TAS2R20 TAS2R43 TAS2R31 MAGOHB ENSG00000256682 LINC02366 SLC25A39P2 HNRNPABP1 LOC100419929
GH12H010384 1.4 FANTOM5 ENCODE dbSUPER 46.3 +212.4 212397 5 TBP FOXA2 ZSCAN4 FEZF1 ZEB1 GTF3C2 FOS ZNF362 YY2 CEBPB TAS2R19 TAS2R31 KLRA1P TAS2R14 TAS2R10 TAS2R15P MAGOHB TAS2R20 TAS2R43 KLRC3
GH12H010391 1.9 FANTOM5 Ensembl ENCODE dbSUPER 34.1 +205.1 205052 7 FOXA2 ARID4B FEZF1 ATF7 RUNX3 DEK JUNB TSHZ1 ZNF662 KAT8 KLRA1P KLRK1 TAS2R20 KLRC3 KLRC4 KLRC2 LOC101928100 TAS2R31 TAS2R43 MAGOHB
GH12H010611 1.2 ENCODE 31.3 -13.5 -13511 2 HDGF MLX ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 KLRA1P TAS2R43 ENSG00000256682 SLC25A39P2 LINC02366 ENSG00000213443 HNRNPABP1 LOC100419929 LOC255308 ENSG00000257027
GH12H010211 1.4 ENCODE dbSUPER 23.5 +386.0 386002 5 PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 KLRA1P LOC642846 DDX12P TAS2R31 LOC255308 TAS2R20 TAS2R19 TAS2R43 TAS2R14 ENSG00000255753
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KLRA1P on UCSC Golden Path with GeneCards custom track

Genomic Location for KLRA1P Gene

Chromosome:
12
Start:
10,588,063 bp from pter
End:
10,599,835 bp from pter
Size:
11,773 bases
Orientation:
Minus strand

Genomic View for KLRA1P Gene

Genes around KLRA1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KLRA1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KLRA1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KLRA1P Gene

Proteins for KLRA1P Gene

Post-translational modifications for KLRA1P Gene

No Post-translational modifications

No data available for DME Specific Peptides for KLRA1P Gene

Domains & Families for KLRA1P Gene

Gene Families for KLRA1P Gene

Suggested Antigen Peptide Sequences for KLRA1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KLRA1P: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for KLRA1P Gene

Function for KLRA1P Gene

Phenotypes From GWAS Catalog for KLRA1P Gene

genes like me logo Genes that share phenotypes with KLRA1P: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for KLRA1P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KLRA1P Gene

Localization for KLRA1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KLRA1P Gene

Pathways & Interactions for KLRA1P Gene

genes like me logo Genes that share pathways with KLRA1P: view

Pathways by source for KLRA1P Gene

1 GeneGo (Thomson Reuters) pathway for KLRA1P Gene

Interacting Proteins for KLRA1P Gene

Gene Ontology (GO) - Biological Process for KLRA1P Gene

None

No data available for SIGNOR curated interactions for KLRA1P Gene

Drugs & Compounds for KLRA1P Gene

No Compound Related Data Available

Transcripts for KLRA1P Gene

mRNA/cDNA for KLRA1P Gene

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for KLRA1P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for KLRA1P Gene

No ASD Table

Relevant External Links for KLRA1P Gene

GeneLoc Exon Structure for
KLRA1P
ECgene alternative splicing isoforms for
KLRA1P

Expression for KLRA1P Gene

NURSA nuclear receptor signaling pathways regulating expression of KLRA1P Gene:

KLRA1P
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KLRA1P Gene

Orthologs for KLRA1P Gene

Evolution for KLRA1P Gene

ENSEMBL:
Gene Tree for KLRA1P (if available)
TreeFam:
Gene Tree for KLRA1P (if available)

No data available for Orthologs for KLRA1P Gene

Paralogs for KLRA1P Gene

No data available for Paralogs for KLRA1P Gene

Variants for KLRA1P Gene

Sequence variations from dbSNP and Humsavar for KLRA1P Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1000323101 -- 10,599,727(+) GGTAC(C/T)GACGG nc-transcript-variant
rs1000337273 -- 10,593,297(+) TATTG(A/T)TACAC intron-variant
rs1000401632 -- 10,591,448(+) ATCCC(A/C)AGTGC intron-variant
rs1000512952 -- 10,597,668(+) GCACA(C/T)AAAAT intron-variant
rs1000609898 -- 10,599,499(+) GATCT(C/G)AGAAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for KLRA1P Gene

Variant ID Type Subtype PubMed ID
esv2745536 CNV deletion 23290073
esv2745537 CNV deletion 23290073
esv2745538 CNV deletion 23290073
esv4222 CNV loss 18987735
esv999821 CNV deletion 20482838
nsv1039120 CNV gain 25217958
nsv1070509 CNV deletion 25765185
nsv1150898 CNV deletion 26484159
nsv819308 CNV loss 19587683
nsv832329 CNV gain 17160897
nsv957266 CNV deletion 24416366

Relevant External Links for KLRA1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KLRA1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for KLRA1P Gene

Disorders for KLRA1P Gene

Relevant External Links for KLRA1P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KLRA1P

No disorders were found for KLRA1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KLRA1P Gene

Publications for KLRA1P Gene

  1. Identification of a human member of the Ly-49 multigene family. (PMID: 9645365) Westgaard IH … Dissen E (European journal of immunology 1998) 2 3 22 60
  2. Molecular architecture of the major histocompatibility complex class I-binding site of Ly49 natural killer cell receptors. (PMID: 18426793) Deng L … Mariuzza RA (The Journal of biological chemistry 2008) 3 22 60
  3. Comparative genomics of natural killer cell receptor gene clusters. (PMID: 16132082) Kelley J … Trowsdale J (PLoS genetics 2005) 3 22 60
  4. DAP12-mediated signal transduction in natural killer cells. A dominant role for the Syk protein-tyrosine kinase. (PMID: 9830044) McVicar DW … Mason LH (The Journal of biological chemistry 1998) 3 22 60
  5. Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3 60

Products for KLRA1P Gene

Sources for KLRA1P Gene

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