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Aliases for KLRA1P Gene

Aliases for KLRA1P Gene

  • Killer Cell Lectin Like Receptor A1, Pseudogene 2 3 5
  • Killer Cell Lectin-Like Receptor Subfamily A Pseudogene 1 2 3
  • Killer Cell Lectin-Like Receptor Subfamily A, Member 1, Pseudogene 3
  • Killer Cell Lectin-Like Receptor Subfamily A, Member 1 2
  • Ly-49L 3
  • KLRAP1 3
  • LY49L 3
  • KLRA1 3
  • Ly49 3

External Ids for KLRA1P Gene

Previous HGNC Symbols for KLRA1P Gene

  • KLRA1
  • KLRAP1

Previous GeneCards Identifiers for KLRA1P Gene

  • GC12M010793
  • GC12M011069

Summaries for KLRA1P Gene

GeneCards Summary for KLRA1P Gene

KLRA1P (Killer Cell Lectin Like Receptor A1, Pseudogene) is a Pseudogene. Among its related pathways are Immune response Role of DAP12 receptors in NK cells.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KLRA1P Gene

Genomics for KLRA1P Gene

Regulatory Elements for KLRA1P Gene

Enhancers for KLRA1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F010384 1.4 FANTOM5 Ensembl ENCODE 41.7 +212.4 212397 5.1 TBP PKNOX1 FEZF1 BMI1 ZEB1 GTF3C2 CBX5 ETV6 FOS CREM KLRA1P MAGOHB TAS2R43 KLRC3 DDX12P TAS2R14 LOC101928100 KLRC4 TAS2R20 KLRC4-KLRK1
GH12F010211 1.2 ENCODE 28.8 +386.0 386002 5.3 HDGF PKNOX1 ARNT MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 DDX12P LOC642846 KLRA1P LOC255308 TAS2R43 ENSG00000213443 ENSG00000257027 ENSG00000256682 TAS2R14 LOC374443
GH12F010715 1.1 ENCODE 25 -120.3 -120260 8.8 MLX WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 ZNF548 KLRA1P LOC101928162 SLC25A39P2 HNRNPABP1 LOC100419929 TAS2R43 TAS2R20 TAS2R50 TAS2R14 ENSG00000256981
GH12F010673 1 ENCODE 21.7 -74.3 -74308 1.5 SIN3A ZNF2 GLIS2 ZNF143 SP3 YY2 REST MAFF SP7 CTCF KLRA1P MAGOHB TAS2R20 TAS2R14 TAS2R31 TAS2R64P TAS2R43 LOC101928100 STYK1 GC12P010619
GH12F010152 1.1 Ensembl ENCODE 17.4 +446.1 446124 1.8 CTCF ZNF48 ZIC2 ZNF2 RAD21 YY1 HIC1 GLIS2 POLR2A PATZ1 KLRA1P LOC642846 TAS2R20 GABARAPL1 ENSG00000255958 TAS2R50 ENSG00000256682 DDX12P TAS2R43 TAS2R46
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KLRA1P on UCSC Golden Path with GeneCards custom track

Genomic Location for KLRA1P Gene

Chromosome:
12
Start:
10,588,063 bp from pter
End:
10,599,835 bp from pter
Size:
11,773 bases
Orientation:
Minus strand

Genomic View for KLRA1P Gene

Genes around KLRA1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KLRA1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KLRA1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KLRA1P Gene

Proteins for KLRA1P Gene

Post-translational modifications for KLRA1P Gene

No Post-translational modifications

No data available for DME Specific Peptides for KLRA1P Gene

Domains & Families for KLRA1P Gene

Gene Families for KLRA1P Gene

Suggested Antigen Peptide Sequences for KLRA1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KLRA1P: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for KLRA1P Gene

Function for KLRA1P Gene

genes like me logo Genes that share phenotypes with KLRA1P: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KLRA1P Gene

Localization for KLRA1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KLRA1P Gene

Pathways & Interactions for KLRA1P Gene

genes like me logo Genes that share pathways with KLRA1P: view

Pathways by source for KLRA1P Gene

1 GeneGo (Thomson Reuters) pathway for KLRA1P Gene

Interacting Proteins for KLRA1P Gene

Gene Ontology (GO) - Biological Process for KLRA1P Gene

None

No data available for SIGNOR curated interactions for KLRA1P Gene

Transcripts for KLRA1P Gene

mRNA/cDNA for KLRA1P Gene

(1) REFSEQ mRNAs :
(12) Additional mRNA sequences :
(22) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KLRA1P Gene

Killer cell lectin-like receptor subfamily A pseudogene 1:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for KLRA1P Gene

No ASD Table

Relevant External Links for KLRA1P Gene

GeneLoc Exon Structure for
KLRA1P
ECgene alternative splicing isoforms for
KLRA1P

Expression for KLRA1P Gene

NURSA nuclear receptor signaling pathways regulating expression of KLRA1P Gene:

KLRA1P

SOURCE GeneReport for Unigene cluster for KLRA1P Gene:

Hs.159297
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for KLRA1P Gene

Orthologs for KLRA1P Gene

Evolution for KLRA1P Gene

ENSEMBL:
Gene Tree for KLRA1P (if available)
TreeFam:
Gene Tree for KLRA1P (if available)

No data available for Orthologs for KLRA1P Gene

Paralogs for KLRA1P Gene

No data available for Paralogs for KLRA1P Gene

Variants for KLRA1P Gene

Sequence variations from dbSNP and Humsavar for KLRA1P Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1003029 -- 10,599,210(-) TTGAA(C/T)GACTC intron-variant
rs10646741 -- 10,601,288(+) TATTT(-/ATTT/TATT/TT)TCGTC upstream-variant-2KB
rs10670670 -- 10,601,287(+) ACAAG(-/TATT)TATTT upstream-variant-2KB
rs10845175 -- 10,591,119(+) CACCC(A/G)TTGGT intron-variant
rs11053874 -- 10,594,572(+) AAAAC(C/T)TATTA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for KLRA1P Gene

Variant ID Type Subtype PubMed ID
nsv957266 CNV deletion 24416366
nsv832329 CNV gain 17160897
nsv819308 CNV loss 19587683
nsv1150898 CNV deletion 26484159
nsv1070509 CNV deletion 25765185
nsv1039120 CNV gain 25217958
esv999821 CNV deletion 20482838
esv4222 CNV loss 18987735
esv2745538 CNV deletion 23290073
esv2745537 CNV deletion 23290073
esv2745536 CNV deletion 23290073

Relevant External Links for KLRA1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KLRA1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for KLRA1P Gene

Disorders for KLRA1P Gene

Relevant External Links for KLRA1P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KLRA1P

No disorders were found for KLRA1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KLRA1P Gene

Publications for KLRA1P Gene

  1. Identification of a human member of the Ly-49 multigene family. (PMID: 9645365) Westgaard I.H. … Dissen E. (Eur. J. Immunol. 1998) 2 3 22 64
  2. Molecular architecture of the major histocompatibility complex class I-binding site of Ly49 natural killer cell receptors. (PMID: 18426793) Deng L. … Mariuzza R.A. (J. Biol. Chem. 2008) 3 22 64
  3. Comparative genomics of natural killer cell receptor gene clusters. (PMID: 16132082) Kelley J. … Trowsdale J. (PLoS Genet. 2005) 3 22 64
  4. DAP12-mediated signal transduction in natural killer cells. A dominant role for the Syk protein-tyrosine kinase. (PMID: 9830044) McVicar D.W. … Mason L.H. (J. Biol. Chem. 1998) 3 22 64
  5. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64

Products for KLRA1P Gene

Sources for KLRA1P Gene

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