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Aliases & Descriptions for KLK3
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases APS 2 , 3 , 5 EC 3.4.21.77 3 Gamma-seminoprotein 3 KLK2A1 2 Kallikrein-3 3 PSA 1 , 2 , 3 , 5 Semenogelase 3 Seminin 3 gamma-seminoprotein 2 hK3 2 semenogelase 2 seminin 2
Descriptions P-30 antigen 2 , 3 kallikrein 3, (prostate specific antigen) 1 kallikrein-related peptidase 3 2 prostate specific antigen 2
Search outside databases for aliases for KLK3 genePrevious GC identifers: GC19P051987 GC19P051719 GC19P056034
Summaries for KLK3 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for KLK3 : Kallikreins are a subgroup of serine proteases having diverse physiological functions. Growingevidence suggests that many kallikreins are implicated in carcinogenesis and some have potentialas novel cancer and other disease biomarkers. This gene is one of the fifteen kallikrein subfamilymembers located in a cluster on chromosome 19. Its protein product is a protease present inseminal plasma. It is thought to function normally in the liquefaction of seminal coagulum,presumably by hydrolysis of the high molecular mass seminal vesicle protein. Serum level of thisprotein, called PSA in the clinical setting, is useful in the diagnosis and monitoring ofprostatic carcinoma. Alternate splicing of this gene generates several transcript variantsencoding different isoforms. [provided by RefSeq] UniProtKB/Swiss-Prot: KLK3_HUMAN, P07288 Function : Hydrolyzes semenogelin-1 thus leading to the liquefaction of the seminal coagulum
Gene Wiki entry for KLK3 (Prostate_specific_antigen)
Genomic Location for KLK3
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the KLK3 gene Entrez Gene cytogenetic band: 19q13.41 Ensembl cytogenetic band: 19q13.33 HGNC cytogenetic band: 19q13.41 KLK3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 19 GeneLoc Exon Structure
GeneLoc location for GC19P056049:
(about GC identifiers )
Start:
56,049,983 bp from pter
End:
56,055,832 bp from pter
Size:
5,850 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000019.8 NT_011109.15 Proteins for KLK3
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: KLK3_HUMAN, P07288 (See
protein sequence )Recommended Name: Prostate-specific antigen precursor Size : 261 amino acids; 28741 Da
Subcellular location : Secreted
PDB structures from and Proteopedia : 1PFA (3D)
 2PSA (3D)
 2ZCH (3D)
 2ZCK (3D)
 2ZCL (3D)
 
Secondary accessions : Q16272 Q86TG8
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (5 alternative transcripts):
NP_001025218.1 NP_001025219.1 NP_001025220.1 NP_001025221.1 NP_001639.1 ENSEMBL proteins: ENSP00000314151 ENSP00000314459 ENSP00000353829 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 4 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for KLK3: Invitrogen Antibodies for KLK3 Millipore Mono- and Polyclonal Antibodies for the study of KLK3 Sigma-Aldrich Antibodies for KLK3 R&D Systems Antibodies for KLK3 (Kallikrein 3/PSA) Antibodies from Abcam (Prostate Specific Antigen ), each with their Abpromise SM Monoclonal and Polyclonal Antibodies from Abnova (KLK3 ) Novus Biologicals Antibodies for KLK3
Assays for KLK3:
Protein
Domains/ Families for KLK3(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P07288 ProtoNet protein and cluster: P07288
2 Blocks protein families : IPB001254 Serine protease IPB001314 Chymotrypsin serine protease family (S1) signature UniProtKB/Swiss-Prot: KLK3_HUMAN, P07288 Similarity : Belongs to the peptidase S1 family. Kallikrein subfamilySimilarity : Contains 1 peptidase S1 domain
Gene Function for KLK3
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 6 ): NM_145864 Applied Biosystems Silencer ® siRNAs for KLK3 Sigma-Aldrich siRNA and siRNA Panels for KLK3 Sigma-Aldrich shRNA for KLK3 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 5 ): NM_001030047                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 5 ): NM_001030047                                  untagged cDNA clones in CMV expression vector (see all 7 ): NM_001030047  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001648 UniProtKB/Swiss-Prot: KLK3_HUMAN, P07288 Function : Hydrolyzes semenogelin-1 thus leading to the liquefaction of the seminal coagulumCatalytic activity : Preferential cleavage: -Tyr- -Xaa-Enzyme Number (IUBMB): EC 3.4.21.77
Genatlas biochemistry entry for KLK3 :kallikrein 3,prostate specific antigen,serine protease,overexpressed in prostate and breastcarcinomas 2 Gene Ontology (GO) molecular function terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0004252 serine-type endopeptidase activity
IEA -- GO:0008233 peptidase activity
IEA --
About this table
Pathways & Interactions for KLK3
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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1 Sigma-Aldrich "Your Favorite Gene" Pathway for KLK3 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for KLK3 5/133 Interacting proteins for KLK3 (ENSP00000314151 3 ) via UniProtKB, MINT, and/or STRING (see all 133
)About this table 2 Gene Ontology (GO) biological process terms (links to tree view) :
About this table
Drugs & Compounds for KLK3 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Enzo Life Sciences drugs & compounds for KLK3
Browse Tocris compounds for KLK3 10/21 Novoseek chemical compound relationships for KLK3 gene (see all 21
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
pt-2a
78.93
12
15073852 (4), 11176395 (1), 15711264 (1), 10569562 (1) (see all 7 )
provenge
69.02
3
15992463 (1), 16736512 (1), 17084174 (1)
125i
62.47
26
7543606 (2), 11516848 (2), 14751360 (2), 10030621 (2) (see all 12 )
psms
58.18
6
17572201 (1), 11489708 (1), 18674807 (1)
r1881
56.52
9
18591159 (3), 18676361 (2), 18621129 (1)
blp 25
53.59
4
16753376 (3)
methylseleninic acid
48.13
17
15141018 (4), 16020662 (3), 17120196 (1), 17346688 (1) (see all 6 )
mibolerone
47.61
3
1712248 (3)
iridium
41.13
5
9403047 (1), 11712084 (1), 11442673 (1), 16643612 (1) (see all 5 )
3-alpha-androstanediol glucuronide
40.94
14
9062481 (2), 11297583 (1), 10634368 (1), 8259343 (1) (see all 5 )
About this table
Transcripts for KLK3(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
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OriGene , Expression Assays from Applied Biosystems )About This Section
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 6 ): NM_145864 Sigma-Aldrich siRNA and siRNA Panels for KLK3 Sigma-Aldrich shRNA for KLK3 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001030047 NM_001030048 NM_001030049 NM_001030050 NM_001648
REFSEQ mRNAs for KLK3 gene (5 alternative transcripts): NM_001030047.1 NM_001030048.1 NM_001030049.1 NM_001030050.1 NM_001648.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001030047 NM_001030048 NM_001030049 NM_001030050 NM_001648
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 5 ): NM_001030047                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 5 ): NM_001030047                                  untagged cDNA clones in CMV expression vector (see all 7 ): NM_001030047  
Additional cDNA sequence: AF335477.1 AF335478.1 AJ310937.1 AJ310938.1 AJ459782.1 AJ459783.1 AJ459784.1 AJ512346.1 AK311887.1 AK312933.1 BC005307.1 BC050595.2 BC056665.1 BT019862.1 DQ641251.1 M21895.1 M21896.1 M21897.1 M26663.1 S75755.1 U17040.1 X05332.1 X07730.1 X75682.1
24/54 DOTS entries (see all 54
): DT.92412919 DT.92461817 DT.101987510 DT.95208239 DT.455621 DT.87016872 DT.92029956 DT.92461821 DT.100060506 DT.87016874 DT.95208245 DT.95208246 DT.95208227 DT.92367459 DT.87002147 DT.87079599 DT.121490621 DT.95208221 DT.455618 DT.121490734 DT.100735196 DT.206121 DT.91966580 DT.100643341
24/1035 AceView cDNA sequences (see all 1035
):CA488291 CA976022 AA595357 CF146776 BX504463 BX508845 BF588642 CA495379 AI989309 BF588664 BQ276292 BF477018 NM_005551 NM_001002231 CF141000 BF476973 CF139149 NM_145864 BF477261 BF592190 CA487655 AA595465 CA487643 T29518
highest scoring ESTs for KLK3 :X05332 AA177118 AA216409 AA224955 AA224994 AA225043 AA225114 AA225137 AA225508 AA226222
Unigene Cluster for KLK3: Kallikrein-related peptidase 3 Hs.171995 [show with all ESTs ] Unigene Representative Sequence: AF335478 GeneLoc Exon Structure 5/13 Alternative Splicing Database (ASD) splice patterns (SP) for KLK3 (see all 13
) ExUns: 1a · 1b · 1c · 1d · 1e · 1f ^ 2a · 2b · 2c · 2d ^ 3a · 3b · 3c ^ 4a · 4b · 4c · 4d ^ 5 ^ 6a · 6b · 6c · 6d · 6e · 6f SP1 :           -   -   -           -         -   -               SP2 :             -   -           -         -   -               SP3 :           -   -   -       -     -         -                 SP4 :           -   -   -       -     -         -   -               SP5 :           -   -   -           -         -                
About this scheme ECgene alternative splicing isoforms for KLK3 3 Ensembl transcripts including schematic representations : ENST00000326003
ENST00000326052
ENST00000360617
Expression for KLK3
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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KLK3 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for KLK3 1 / 2 / 3
14 probe-sets matching KLK3 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GGATGGGGATSOURCE GeneReport for Unigene cluster: Hs.171995 Expression variation in blood from EXPOLDB for KLK3
Orthologs for KLK3
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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ENSEMBL Gene Tree for KLK3 Paralogs for KLK3 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for KLK3 gene TRYX3 2 KLK2 2 KLK10 2 KLK1 2 LOC136242 2
SNPs/Variants for KLK3 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for KLK3 (up to first 250kb)
Disorders & Mutations for KLK3
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 176820 10/94 Novoseek disease relationships for KLK3 gene (see all 94
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
prostate cancer
98.70
13436
9372881 (10), 11391681 (9), 12187207 (9), 7537603 (9) (see all 99 )
prostate carcinoma
94.29
1117
10951348 (6), 16419068 (6), 8847816 (5), 15578715 (5) (see all 99 )
benign prostatic hyperplasia
93.42
969
9674713 (6), 8791046 (4), 15044396 (4), 7516808 (3) (see all 99 )
prostatic adenocarcinoma
91.20
247
7525979 (5), 17963516 (3), 8958315 (2), 11106075 (2) (see all 99 )
prostatic diseases
88.95
218
7551887 (3), 11720279 (3), 12394676 (3), 7685140 (3) (see all 99 )
recurrent prostate cancer
88.52
61
9126236 (2), 9338734 (2), 16609031 (2), 1279216 (1) (see all 44 )
prostatic intraepithelial neoplasia
88.04
161
10524873 (8), 7686984 (7), 8709305 (4), 7541850 (3) (see all 72 )
cancer
86.81
3627
7514689 (8), 11743285 (7), 1283897 (7), 9145718 (7) (see all 99 )
androgen suppression
86.67
83
9166947 (4), 10477903 (4), 14712491 (3), 11685725 (2) (see all 45 )
stage prostate cancer
86.17
54
11999465 (2), 18411775 (2), 9649289 (2), 14675918 (1) (see all 41 )
About this table Human Gene Mutation Database : KLK3 Genetic Association Database: KLK3 Human Genome Epidemiology Navigator: KLK3 (96 documents)
Medical News for KLK3 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for KLK3 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/2709 PubMed articles for KLK3 gene (see all 2709
): Sequence of a cDNA clone encompassing the complete mature human prostate specific antigen (PSA) and an unspliced leader sequence. (PubMed id 2456523) 2, 3, 4 Schulz P....Fittler F. (1988) Molecular cloning of human prostate specific antigen cDNA. (PubMed id 2436946) 2, 3, 4 Lundwall A. and Lilja H. (1987) Polymorphic CAG repeats in the androgen receptor gene, prostate-specific antigen polymorphism and prostate cancer risk. (PubMed id 12376473) 1, 3, 6 Gsur A....Micksche M. (2002) Correlation of prostate-specific antigen promoter polymorphisms with clinicopathological characteristics in breast cancer. (PubMed id 12168876) 1, 3, 6 Yang Q....Kakudo K. (2002) Androgen receptor and prostate-specific antigen gene polymorphisms and breast cancer in African-American women. (PubMed id 16365023) 1, 3, 6 Wang W....Ingles S.A. (2005) Molecular characterization of prostate-specific antigen messenger RNA expressed in breast tumors. (PubMed id 7527295) 1, 3, 4 Monne M.... Diamandis E.P. (1994) Role of androgen metabolism genes CYP1B1, PSA/KLK3, and CYP11alpha in prostate cancer risk and aggressiveness. (PubMed id 16172228) 1, 3, 6 Cicek M.S....Witte J.S. (2005) Association between genetic polymorphisms in the prostate-specific antigen gene promoter and serum prostate-specific antigen levels. (PubMed id 12865450) 1, 3, 6 Cramer S.D....Xu J. (2003) Novel polymorphisms in prostate specific antigen gene and its association with prostate cancer. (PubMed id 11299734) 1, 3, 6 Yang Q....Kakudo K. (2001) Sequencing and expression analysis of the serine protease gene cluster located in chromosome 19q13 region. (PubMed id 11054574) 1, 3, 4 Gan L.... Wang K. (2000)
Search for KLK3
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Genome Databases showing KLK3
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing KLK3
(According to HUGE )
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Specialized Databases showing KLK3 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for KLK3 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for KLK3:
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009