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Aliases for KLK12 Gene

Aliases for KLK12 Gene

  • Kallikrein Related Peptidase 12 2 3 5
  • Kallikrein-Like Protein 5 3 4
  • KLK-L5 3 4
  • KLKL5 3 4
  • Kallikrein 12 2
  • Kallikrein-12 3
  • EC 3.4.21.- 4
  • EC 3.4.21 61

External Ids for KLK12 Gene

Previous GeneCards Identifiers for KLK12 Gene

  • GC19M052162
  • GC19M051893
  • GC19M056202
  • GC19M056224
  • GC19M051532
  • GC19M047864

Summaries for KLK12 Gene

Entrez Gene Summary for KLK12 Gene

  • Kallikreins are a subgroup of serine proteases having diverse physiological functions. Growing evidence suggests that many kallikreins are implicated in carcinogenesis and some have potential as novel cancer and other disease biomarkers. This gene is one of the fifteen kallikrein subfamily members located in a cluster on chromosome 19. Alternate splicing of this gene results in three transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]

GeneCards Summary for KLK12 Gene

KLK12 (Kallikrein Related Peptidase 12) is a Protein Coding gene. Among its related pathways are Collagen chain trimerization and Keratinization. GO annotations related to this gene include serine-type endopeptidase activity and serine-type peptidase activity. An important paralog of this gene is KLK8.

Gene Wiki entry for KLK12 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KLK12 Gene

Genomics for KLK12 Gene

Regulatory Elements for KLK12 Gene

Enhancers for KLK12 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G050375 1.4 ENCODE dbSUPER 7.2 +658.8 658831 2.1 CREB3L1 ZFP64 DMAP1 YY1 ZNF143 SP3 NFYC TBX21 ZNF610 GLIS1 NAPSB SNORD35B ALDH16A1 SNORD35A POLD1 RPS11 PIH1D1 NUP62 FLT3LG PNKP
GH19G050264 0.8 FANTOM5 5.2 +771.1 771060 0.1 CTCF ATF1 RB1 TAL1 RAD21 TCF12 GATA3 NCOR1 NFYB ADNP KLK12 IZUMO2 PIR48748 GC19P050308
GH19G051025 0.6 ENCODE 6.1 +9.0 8953 2.5 MTA3 PKNOX1 MCM3 ZNF223 MNT ZBTB33 MGA KLK12 KLK11 KLK10
GH19G050267 0.5 ENCODE 4.6 +768.5 768514 0.2 KLF1 IRF1 KLF8 KLK12 PIR48748 GC19P050308
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KLK12 on UCSC Golden Path with GeneCards custom track

Genomic Location for KLK12 Gene

Chromosome:
19
Start:
51,028,960 bp from pter
End:
51,035,652 bp from pter
Size:
6,693 bases
Orientation:
Minus strand

Genomic View for KLK12 Gene

Genes around KLK12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KLK12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KLK12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KLK12 Gene

Proteins for KLK12 Gene

  • Protein details for KLK12 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9UKR0-KLK12_HUMAN
    Recommended name:
    Kallikrein-12
    Protein Accession:
    Q9UKR0
    Secondary Accessions:
    • Q9UKR1
    • Q9UKR2

    Protein attributes for KLK12 Gene

    Size:
    248 amino acids
    Molecular mass:
    26734 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for KLK12 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for KLK12 Gene

Selected DME Specific Peptides for KLK12 Gene

Q9UKR0:
  • DACQGDSGG
  • VLTAAHC
  • GDSGGPL
  • SGGPLVC
  • CQGDSGGP
  • WVLTAAH

Post-translational modifications for KLK12 Gene

  • Glycosylation at isoforms=2, 324 and isoforms=2163
  • Modification sites at PhosphoSitePlus

Domains & Families for KLK12 Gene

Gene Families for KLK12 Gene

Suggested Antigen Peptide Sequences for KLK12 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9UKR0

UniProtKB/Swiss-Prot:

KLK12_HUMAN :
  • Belongs to the peptidase S1 family. Kallikrein subfamily.
Family:
  • Belongs to the peptidase S1 family. Kallikrein subfamily.
genes like me logo Genes that share domains with KLK12: view

Function for KLK12 Gene

Enzyme Numbers (IUBMB) for KLK12 Gene

Gene Ontology (GO) - Molecular Function for KLK12 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004252 serine-type endopeptidase activity NAS 11054574
GO:0008233 peptidase activity IDA 21628462
GO:0008236 serine-type peptidase activity IDA 15300858
GO:0016787 hydrolase activity IEA --
genes like me logo Genes that share ontologies with KLK12: view
genes like me logo Genes that share phenotypes with KLK12: view

Animal Model Products

  • Taconic Biosciences Mouse Models for KLK12

miRNA for KLK12 Gene

miRTarBase miRNAs that target KLK12

Inhibitory RNA Products

No data available for Molecular function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for KLK12 Gene

Localization for KLK12 Gene

Subcellular locations from UniProtKB/Swiss-Prot for KLK12 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for KLK12 gene
Compartment Confidence
extracellular 5

Gene Ontology (GO) - Cellular Components for KLK12 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region TAS --
GO:0005615 extracellular space NAS 21628462
GO:0070062 extracellular exosome IDA 23376485
genes like me logo Genes that share ontologies with KLK12: view

Pathways & Interactions for KLK12 Gene

genes like me logo Genes that share pathways with KLK12: view

Pathways by source for KLK12 Gene

Gene Ontology (GO) - Biological Process for KLK12 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006508 proteolysis IDA 21628462
GO:0070268 cornification TAS --
genes like me logo Genes that share ontologies with KLK12: view

No data available for SIGNOR curated interactions for KLK12 Gene

Drugs & Compounds for KLK12 Gene

No Compound Related Data Available

Transcripts for KLK12 Gene

mRNA/cDNA for KLK12 Gene

Unigene Clusters for KLK12 Gene

Kallikrein-related peptidase 12:
Representative Sequences:

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for KLK12 Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b · 2c ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7
SP1: - - - -
SP2: -
SP3: - -
SP4: - -

Relevant External Links for KLK12 Gene

GeneLoc Exon Structure for
KLK12
ECgene alternative splicing isoforms for
KLK12

Expression for KLK12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KLK12 Gene

mRNA differential expression in normal tissues according to GTEx for KLK12 Gene

This gene is overexpressed in Esophagus - Mucosa (x26.8), Cervix - Ectocervix (x12.8), Vagina (x6.8), and Minor Salivary Gland (x4.3).

Protein differential expression in normal tissues from HIPED for KLK12 Gene

This gene is overexpressed in Saliva (52.9) and Salivary gland (8.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for KLK12 Gene



NURSA nuclear receptor signaling pathways regulating expression of KLK12 Gene:

KLK12

SOURCE GeneReport for Unigene cluster for KLK12 Gene:

Hs.411572
genes like me logo Genes that share expression patterns with KLK12: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KLK12 Gene

Orthologs for KLK12 Gene

This gene was present in the common ancestor of chordates.

Orthologs for KLK12 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia KLK12 35 34
  • 98.45 (n)
OneToOne
cow
(Bos Taurus)
Mammalia KLK12 34 35
  • 82.39 (n)
dog
(Canis familiaris)
Mammalia KLK12 34
  • 81.72 (n)
-- 35
  • 25 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Klk12 34 16 35
  • 75.3 (n)
rat
(Rattus norvegicus)
Mammalia Klk12 34
  • 73.37 (n)
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 45 (a)
OneToMany
Species where no ortholog for KLK12 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for KLK12 Gene

ENSEMBL:
Gene Tree for KLK12 (if available)
TreeFam:
Gene Tree for KLK12 (if available)

Paralogs for KLK12 Gene

genes like me logo Genes that share paralogs with KLK12: view

Variants for KLK12 Gene

Sequence variations from dbSNP and Humsavar for KLK12 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000053353 -- 51,036,554(+) CTGTC(C/T)GTGTC upstream-variant-2KB
rs1000646429 -- 51,032,808(+) TGGAC(A/G)AGTGG intron-variant
rs1000953191 -- 51,032,629(+) TGATC(C/T)GCCCG intron-variant
rs1001308962 -- 51,032,089(+) GGTCC(A/G)GTCGA intron-variant, reference, missense
rs1002149454 -- 51,033,177(+) CATCA(C/G)TGCAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for KLK12 Gene

Variant ID Type Subtype PubMed ID
nsv1140251 OTHER inversion 24896259

Variation tolerance for KLK12 Gene

Residual Variation Intolerance Score: 70.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.65; 56.84% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for KLK12 Gene

Human Gene Mutation Database (HGMD)
KLK12
SNPedia medical, phenotypic, and genealogical associations of SNPs for
KLK12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for KLK12 Gene

Disorders for KLK12 Gene

Relevant External Links for KLK12

Genetic Association Database (GAD)
KLK12
Human Genome Epidemiology (HuGE) Navigator
KLK12
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KLK12

No disorders were found for KLK12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KLK12 Gene

Publications for KLK12 Gene

  1. Splice-site genetic polymorphism of the human kallikrein 12 (KLK12) gene correlates with no substantial expression of KLK12 protein having serine protease activity. (PMID: 15300858) Shinmura K. … Sugimura H. (Hum. Mutat. 2004) 3 22 46 64
  2. Blood biomarker levels to aid discovery of cancer-related single-nucleotide polymorphisms: kallikreins and prostate cancer. (PMID: 20424135) Klein R.J. … Lilja H. (Cancer Prev Res (Phila) 2010) 3 46 64
  3. Proceedings of the 1st International Symposium on Kallikreins, Lausanne, Switzerland, September 1-3 , 2005. (PMID: 16800723) (Biol. Chem. 2006) 2 3 64
  4. A comprehensive nomenclature for serine proteases with homology to tissue kallikreins. (PMID: 16800724) Lundwall A. … Yousef G.M. (Biol. Chem. 2006) 2 3 64
  5. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 3 4 64

Products for KLK12 Gene

Sources for KLK12 Gene

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