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Aliases for KLHL7-AS1 Gene

Subcategory (RNA class) for KLHL7-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KLHL7-AS1 Gene

  • KLHL7 Antisense RNA 1 (Head To Head) 2 3 5
  • KLHL7 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Placental Transcript Antisense To KLHL7 2 3
  • KLHL7 Antisense RNA 1 2
  • PLATAK 3

External Ids for KLHL7-AS1 Gene

Summaries for KLHL7-AS1 Gene

GeneCards Summary for KLHL7-AS1 Gene

KLHL7-AS1 (KLHL7 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for KLHL7-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KLHL7-AS1 Gene

Genomics for KLHL7-AS1 Gene

GeneHancer (GH) Regulatory Elements for KLHL7-AS1 Gene

Promoters and enhancers for KLHL7-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I023104 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 629.5 -0.7 -665 2.9 SMAD1 MLX ARID4B SIN3A DMAP1 YY1 SLC30A9 POLR2B ZNF766 ZNF143 KLHL7-AS1 KLHL7 NUPL2 FAM126A AK3P3
GH07I023181 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 49.1 -76.9 -76946 3.3 CLOCK MLX FEZF1 DMAP1 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC NUPL2 KLHL7-AS1 EEF1A1P6 ENSG00000226816 SNHG26 ENSG00000226329 TRA2A
GH07I023246 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 39.6 -141.7 -141740 2.6 USF1 ZMYM3 ZNF507 ZNF316 POLR2A SCRT2 RCOR1 FOSL2 FOS IKZF2 GPNMB KLHL7-AS1 IGF2BP3 LOC389473 KLHL7 ENSG00000226816 MALSU1
GH07I023297 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 31.9 -193.6 -193585 3.4 HDGF PKNOX1 SMAD1 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 MALSU1 KLHL7-AS1 CLK2P1 TRA2A CCDC126 ENSG00000232627
GH07I023205 Promoter/Enhancer 1.2 Ensembl ENCODE 46.2 -100.9 -100897 1.9 ELF3 SOX13 FOXA2 SAP130 CEBPG ZNF48 POLR2A RCOR1 NR2F6 CHD2 ENSG00000226816 KLHL7-AS1 GPNMB NUPL2 LOC101927890
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around KLHL7-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KLHL7-AS1 Gene

Genomic Locations for KLHL7-AS1 Gene
chr7:23,101,228-23,105,703
(GRCh38/hg38)
Size:
4,476 bases
Orientation:
Minus strand
chr7:23,140,847-23,145,322
(GRCh37/hg19)

Genomic View for KLHL7-AS1 Gene

Genes around KLHL7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KLHL7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KLHL7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KLHL7-AS1 Gene

Proteins for KLHL7-AS1 Gene

Post-translational modifications for KLHL7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KLHL7-AS1 Gene

Domains & Families for KLHL7-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KLHL7-AS1 Gene

Function for KLHL7-AS1 Gene

Phenotypes From GWAS Catalog for KLHL7-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KLHL7-AS1 Gene

Localization for KLHL7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KLHL7-AS1 Gene

Pathways & Interactions for KLHL7-AS1 Gene

SuperPathways for KLHL7-AS1 Gene

No Data Available

Interacting Proteins for KLHL7-AS1 Gene

Gene Ontology (GO) - Biological Process for KLHL7-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KLHL7-AS1 Gene

Drugs & Compounds for KLHL7-AS1 Gene

No Compound Related Data Available

Transcripts for KLHL7-AS1 Gene

mRNA/cDNA for KLHL7-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KLHL7-AS1 Gene

No ASD Table

Relevant External Links for KLHL7-AS1 Gene

GeneLoc Exon Structure for
KLHL7-AS1
ECgene alternative splicing isoforms for
KLHL7-AS1

Expression for KLHL7-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KLHL7-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for KLHL7-AS1 Gene

This gene is overexpressed in Testis (x5.9).
genes like me logo Genes that share expression patterns with KLHL7-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KLHL7-AS1 Gene

Orthologs for KLHL7-AS1 Gene

Evolution for KLHL7-AS1 Gene

ENSEMBL:
Gene Tree for KLHL7-AS1 (if available)
TreeFam:
Gene Tree for KLHL7-AS1 (if available)

No data available for Orthologs for KLHL7-AS1 Gene

Paralogs for KLHL7-AS1 Gene

No data available for Paralogs for KLHL7-AS1 Gene

Variants for KLHL7-AS1 Gene

Sequence variations from dbSNP and Humsavar for KLHL7-AS1 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs184270958 likely-benign, Retinitis Pigmentosa, Dominant 23,105,821(-) C/T upstream_transcript_variant
rs200506606 uncertain-significance, Retinitis Pigmentosa, Dominant 23,105,989(-) G/A upstream_transcript_variant
rs545540476 uncertain-significance, Retinitis Pigmentosa, Dominant 23,105,882(-) C/T upstream_transcript_variant
rs556626844 likely-benign, Retinitis Pigmentosa, Dominant 23,105,796(-) G/A/C/T upstream_transcript_variant
rs563311203 uncertain-significance, Retinitis Pigmentosa, Dominant 23,106,011(-) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for KLHL7-AS1 Gene

Variant ID Type Subtype PubMed ID
esv22636 CNV loss 19812545
esv2422166 CNV deletion 20811451
esv2670721 CNV deletion 23128226
esv2671304 CNV deletion 23128226
esv2761138 CNV loss 21179565
esv3612535 CNV loss 21293372
esv3612536 CNV loss 21293372
nsv1025707 CNV loss 25217958
nsv1027363 CNV gain 25217958
nsv437539 CNV loss 16327808
nsv437540 CNV loss 16327808
nsv442034 CNV gain+loss 18776908
nsv514409 CNV loss 21397061
nsv516984 CNV loss 19592680
nsv524486 CNV gain 19592680
nsv526131 CNV loss 19592680
nsv7393 OTHER inversion 18451855
nsv8070 CNV loss 18304495
nsv818493 CNV loss 17921354

Additional Variant Information for KLHL7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KLHL7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for KLHL7-AS1 Gene

Disorders for KLHL7-AS1 Gene

Additional Disease Information for KLHL7-AS1

No disorders were found for KLHL7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KLHL7-AS1 Gene

Publications for KLHL7-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for KLHL7-AS1 Gene

Sources for KLHL7-AS1 Gene

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