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Aliases for KLHL7-AS1 Gene

Subcategory (RNA class) for KLHL7-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KLHL7-AS1 Gene

  • KLHL7 Antisense RNA 1 (Head To Head) 2 3 5
  • KLHL7 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Placental Transcript Antisense To KLHL7 2 3
  • KLHL7 Antisense RNA 1 2
  • PLATAK 3

External Ids for KLHL7-AS1 Gene

Summaries for KLHL7-AS1 Gene

GeneCards Summary for KLHL7-AS1 Gene

KLHL7-AS1 (KLHL7 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KLHL7-AS1 Gene

Genomics for KLHL7-AS1 Gene

Regulatory Elements for KLHL7-AS1 Gene

Enhancers for KLHL7-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G023104 1.1 ENCODE 79.5 -0.7 -665 2.9 MLX AGO1 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF766 ZNF143 DEK KLHL7-AS1 NUPL2 FAM126A KLHL7 AK3P3
GH07G023114 0.8 Ensembl ENCODE 73.9 -9.9 -9861 2.8 BCL11A TEAD4 REST ZNF600 FOS CHD7 EZH2 KLHL7-AS1 NUPL2 FAM126A AK3P3 KLHL7
GH07G023181 1.2 ENCODE 49 -76.9 -76947 3.3 MLX CREB3L1 FEZF1 DMAP1 YY1 SP3 NFYC TBX21 MEF2D SSRP1 KLHL7-AS1 TRA2A ENSG00000226816 SNHG26 ENSG00000226329 EEF1A1P6 NUPL2
GH07G023272 1.3 Ensembl ENCODE 44.6 -167.8 -167792 1.6 PKNOX1 ARNT WRNIP1 ARID4B SIN3A ZNF2 ZNF143 ZNF207 FOS DEK KLHL7-AS1 TRA2A GPNMB MALSU1
GH07G023345 1.5 Ensembl ENCODE dbSUPER 30.4 -243.0 -242987 6.3 HDGF HNRNPUL1 ARNT SIN3A TCF12 ZNF121 ZNF766 GATA2 CBX5 FOS KLHL7-AS1 ENSG00000212264 IGF2BP3 RNU7-143P LOC541472 ENSG00000232627 MALSU1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KLHL7-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for KLHL7-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000209468 -597 2601 MLX AGO1 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF766 ZNF143 DEK

Genomic Location for KLHL7-AS1 Gene

Chromosome:
7
Start:
23,101,228 bp from pter
End:
23,105,703 bp from pter
Size:
4,476 bases
Orientation:
Minus strand

Genomic View for KLHL7-AS1 Gene

Genes around KLHL7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KLHL7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KLHL7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KLHL7-AS1 Gene

Proteins for KLHL7-AS1 Gene

Post-translational modifications for KLHL7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KLHL7-AS1 Gene

Domains & Families for KLHL7-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KLHL7-AS1 Gene

Function for KLHL7-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KLHL7-AS1 Gene

Localization for KLHL7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KLHL7-AS1 Gene

Pathways & Interactions for KLHL7-AS1 Gene

SuperPathways for KLHL7-AS1 Gene

No Data Available

Interacting Proteins for KLHL7-AS1 Gene

Gene Ontology (GO) - Biological Process for KLHL7-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KLHL7-AS1 Gene

Transcripts for KLHL7-AS1 Gene

mRNA/cDNA for KLHL7-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KLHL7-AS1 Gene

No ASD Table

Relevant External Links for KLHL7-AS1 Gene

GeneLoc Exon Structure for
KLHL7-AS1
ECgene alternative splicing isoforms for
KLHL7-AS1

Expression for KLHL7-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KLHL7-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for KLHL7-AS1 Gene

This gene is overexpressed in Testis (x5.9).
genes like me logo Genes that share expression patterns with KLHL7-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KLHL7-AS1 Gene

Orthologs for KLHL7-AS1 Gene

Evolution for KLHL7-AS1 Gene

ENSEMBL:
Gene Tree for KLHL7-AS1 (if available)
TreeFam:
Gene Tree for KLHL7-AS1 (if available)

No data available for Orthologs for KLHL7-AS1 Gene

Paralogs for KLHL7-AS1 Gene

No data available for Paralogs for KLHL7-AS1 Gene

Variants for KLHL7-AS1 Gene

Sequence variations from dbSNP and Humsavar for KLHL7-AS1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs184270958 Likely benign 23,105,821(+) AGCGT(C/T)GCTCC nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs556626844 Likely benign 23,105,796(+) TGCCC(A/C/G/T)GGGAC nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs75076913 Likely benign 23,105,792(+) GTTCT(G/T)CCCGG nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs200506606 Uncertain significance 23,105,989(+) GCCCG(A/G)CCCGG nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs545540476 Uncertain significance 23,105,882(+) GCCAC(C/T)GCCGC nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for KLHL7-AS1 Gene

Variant ID Type Subtype PubMed ID
esv22636 CNV loss 19812545
esv2422166 CNV deletion 20811451
esv2670721 CNV deletion 23128226
esv2671304 CNV deletion 23128226
esv2761138 CNV loss 21179565
esv3612535 CNV loss 21293372
esv3612536 CNV loss 21293372
nsv1025707 CNV loss 25217958
nsv1027363 CNV gain 25217958
nsv437539 CNV loss 16327808
nsv437540 CNV loss 16327808
nsv442034 CNV gain+loss 18776908
nsv514409 CNV loss 21397061
nsv516984 CNV loss 19592680
nsv524486 CNV gain 19592680
nsv526131 CNV loss 19592680
nsv7393 OTHER inversion 18451855
nsv8070 CNV loss 18304495
nsv818493 CNV loss 17921354

Relevant External Links for KLHL7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KLHL7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for KLHL7-AS1 Gene

Disorders for KLHL7-AS1 Gene

Relevant External Links for KLHL7-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KLHL7-AS1

No disorders were found for KLHL7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KLHL7-AS1 Gene

Publications for KLHL7-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for KLHL7-AS1 Gene

Sources for KLHL7-AS1 Gene

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