Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

KLHL20 Gene

protein-coding   GIFtS: 50
GCID: GC01P173684

kelch-like family member 20

(Previous name: kelch-like 20 (Drosophila) )
 Explore 6 diseases affiliated with
KLHL20 via our new
 Human Malady Compendium 
Biological research products
for KLHL20
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Kelch-Like Family Member 201 2     KLHLX2
KLEIP1 2 3     RP3-383J4.32
KHLHX1 2     Kelch Motif Containing Protein2
Kelch-Like ECT2-Interacting Protein2 3     Kelch-Like 202
Kelch-Like Protein X2 3     Kelch-Like ECT2 Interacting Protein2
Kelch-Like 20 (Drosophila)1     Kelch-Like Protein 202

External Ids:    HGNC: 250561   Entrez Gene: 272522   Ensembl: ENSG000000763217   UniProtKB: Q9Y2M53   

Export aliases for KLHL20 gene to outside databases

Previous GC identifers: GC01P170416 GC01P171950 GC01P144908


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for KLHL20:
The protein encoded by this gene is a member of the kelch family of proteins, which is characterized by a 44-56 amino
acid repeat motif. The kelch motif appears in many different polypeptide contexts and contains multiple potential
protein-protein contact sites. Members of this family are present both throughout the cell and extracellularly, with
diverse activities. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: KLH20_HUMAN, Q9Y2M5
Function: Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex involved in
interferon response. The BCR(KLHL20) E3 ubiquitin ligase complex mediates the ubiquitination of DAPK1, leading to its
degradation by the proteasome, thereby acting as a negative regulator of apoptosis. Also acts as a regulator of
endothelial migration during angiogenesis by controlling the activation of Rho GTPases

Gene Wiki entry for KLHL20


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000001.10  NC_018912.1  NT_004487.19  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the KLHL20 gene promoter:
         Elk-1   NF-1   FOXO3   CUTL1   c-Ets-1   GATA-1   AREB6   FOXO4   FOXO3a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidKLHL20 promoter sequence
   Search SABiosciences Chromatin IP Primers for KLHL20

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat KLHL20


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 1q25.1   Ensembl cytogenetic band:  1q25.1   HGNC cytogenetic band: 1q25.1

KLHL20 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
KLHL20 gene location

GeneLoc information about chromosome 1         GeneLoc Exon Structure

GeneLoc location for GC01P173684:  view genomic region     (about GC identifiers)

Start:
173,684,080 bp from pter      End:
173,755,840 bp from pter
Size:
71,761 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: KLH20_HUMAN, Q9Y2M5 (See protein sequence)
Recommended Name: Kelch-like protein 20  
Size: 609 amino acids; 67955 Da
Subunit: Component of the BCR(KLHL20) E3 ubiquitin ligase complex, at least composed of CUL3, KLHL20 and RBX1.
Interacts with DAPK1. Interacts with F-actin. Interacts with IFN-gamma (IFNG)
Subcellular location: Cytoplasm, perinuclear region. Nucleus. Note=Localizes in the perinuclear region in normal
conditions. Following IFN-alpha or IFN-gamma treatment, it is relocalized and sequestrated to the PML nuclear bodies,
preventing DAPK1 ubiquitination
Secondary accessions: B3KMA0 Q5TZF2 Q5ZF45 Q9H457

Explore the universe of human proteins at neXtProt for KLHL20: NX_Q9Y2M5

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9Y2M5

  • KLHL20 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_055273.2  
    ENSEMBL proteins: 
     ENSP00000209884   ENSP00000443121  
    Reactome Protein details: Q9Y2M5
    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    Browse OriGene Protein Over-expression Lysates
    OriGene Custom Protein Services for KLHL20 
    GenScript Custom Purified and Recombinant Proteins Services for KLHL20
    Novus Biologicals KLHL20 Protein
    Novus Biologicals KLHL20 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for KLHL20

    Gene Ontology (GO): 5/10 cellular component terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA--
    GO:0005730NOT nucleolus IDA--
    GO:0005737cytoplasm IDA--
    GO:0005794Golgi apparatus IDA--
    GO:0009986cell surface IDA12493773


    KLHL20 for ontologies           About GeneDecksing



    KLHL20 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for KLHL20 
    GenScript Custom Superior Antibodies Services for KLHL20
    Novus Biologicals KLHL20 Antibodies
    Search for Antibodies for KLHL20 at Abcam  
    Uscn Antibodies for KLHL20
    ThermoFisher Antibodies for KLHL20

    Assay Products for KLHL20: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for KLHL20
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for KLHL20


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    KLHL20 for domains           About GeneDecksing

    5/7 InterPro domains/families (see all 7):
     IPR017096 Kelch-like_gigaxonin
     IPR000210 BTB/POZ-like
     IPR006652 Kelch_1
     IPR011333 BTB/POZ_fold
     IPR015916 Gal_Oxidase_b-propeller

    Graphical View of Domain Structure for InterPro Entry Q9Y2M5

    ProtoNet protein and cluster: Q9Y2M5

    3 Blocks protein families:
    IPB000210 BTB/POZ domain
    IPB011498 Kelch
    IPB011705 BTB/Kelch-associated


    UniProtKB/Swiss-Prot: KLH20_HUMAN, Q9Y2M5
    Similarity: Contains 1 BACK (BTB/Kelch associated) domain
    Similarity: Contains 1 BTB (POZ) domain
    Similarity: Contains 6 Kelch repeats


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: KLH20_HUMAN, Q9Y2M5
    Function: Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex involved in
    interferon response. The BCR(KLHL20) E3 ubiquitin ligase complex mediates the ubiquitination of DAPK1, leading to its
    degradation by the proteasome, thereby acting as a negative regulator of apoptosis. Also acts as a regulator of
    endothelial migration during angiogenesis by controlling the activation of Rho GTPases

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: KLHL20
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat KLHL20
    8/41 QIAGEN miScript miRNA Assays for microRNAs that regulate KLHL20 (see all 41):
    hsa-miR-3678-3p hsa-miR-4307 hsa-miR-3146 hsa-miR-106a hsa-miR-30d hsa-miR-301a hsa-miR-519a hsa-miR-1304
    SwitchGear 3'UTR luciferase reporter plasmidKLHL20 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for KLHL20 (see all 7)
    OriGene shRNA RFP: KLHL20
    OriGene siRNA: KLHL20
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat KLHL20

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for KLHL20

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for KLHL20 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for KLHL20
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: KLHL20 (NM_014458)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for KLHL20
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat KLHL20 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for KLHL20
    Search LifeMap BioReagents cell lines for KLHL20

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for KLHL20

    Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003779actin binding IEA--
    GO:0004842ubiquitin-protein ligase activity IDA--
    GO:0005515protein binding IPI--
    GO:0019964interferon-gamma binding IDA--


    KLHL20 for ontologies           About GeneDecksing



    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Antigen processing: Ubiquitination & Proteasome degradation
    Antigen processing: Ubiquitination & Proteasome degradation1.00
    Polyubiquitination of substrate0.75
    Class I MHC mediated antigen processing & presentation0.83
    2Immune System
    Immune System1.00
    Adaptive Immune System0.59
    3E-cadherin signaling in the nascent adherens junction
    E-cadherin signaling in the nascent adherens junction1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 BioSystems Pathway for KLHL20 
        E-cadherin signaling in the nascent adherens junction

    5        Reactome Pathways for KLHL20
        Antigen processing: Ubiquitination & Proteasome degradation
    Polyubiquitination of substrate
    Adaptive Immune System
    Class I MHC mediated antigen processing & presentation
    Immune System


    UniProtKB/Swiss-Prot: KLH20_HUMAN, Q9Y2M5
    Pathway: Protein modification; protein ubiquitination


    KLHL20 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for KLHL20

    STRING Interaction Network Preview (showing 5 interactants - click image to see 20)

    5/31 Interacting proteins for KLHL20 (Q9Y2M51, 3 ENSP000002098844) via UniProtKB, MINT, STRING, and/or I2D (see all 31)

    InteractantInteraction Details
    GeneCardExternal ID(s)
    PMLP295901, 3, ENSP000002680584EBI-714379,EBI-870812 I2D: score=2 STRING: ENSP00000268058
    C7orf55-LUC7L2Q9Y3833I2D: score=4 
    LUC7L2Q9Y3833I2D: score=4 
    CUL3Q136183, ENSP000002644144I2D: score=2 STRING: ENSP00000264414
    COPS6Q7L5N13, ENSP000003041024I2D: score=2 STRING: ENSP00000304102
    About this table

    Gene Ontology (GO): 5 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007010cytoskeleton organization TAS10888605
    GO:0016567protein ubiquitination IDA--
    GO:0035455response to interferon-alpha TAS--
    GO:0043066negative regulation of apoptotic process IMP--
    GO:0043161proteasomal ubiquitin-dependent protein catabolic process IDA--


    KLHL20 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for KLHL20
    Search CenterWatch for drugs/clinical trials and news about KLHL20 / KLH20 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for KLHL20 gene: 
    NM_014458.3  

    Unigene Cluster for KLHL20:

    Kelch-like 20 (Drosophila)
    Hs.495035  [show with all ESTs]
    Unigene Representative Sequence: NM_014458
    6 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000479505 ENST00000209884(uc001gjc.3 uc010pmr.2 uc009wwf.3)
    ENST00000483154 ENST00000493170(uc001gjd.3) ENST00000488983 ENST00000546011


    miRNA
    Products:
         
    OriGene 3'-UTR Clone: KLHL20
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat KLHL20
    8/41 QIAGEN miScript miRNA Assays for microRNAs that regulate KLHL20 (see all 41):
    hsa-miR-3678-3p hsa-miR-4307 hsa-miR-3146 hsa-miR-106a hsa-miR-30d hsa-miR-301a hsa-miR-519a hsa-miR-1304
    SwitchGear 3'UTR luciferase reporter plasmidKLHL20 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for KLHL20 (see all 7)
    OriGene shRNA RFP: KLHL20
    OriGene siRNA: KLHL20
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat KLHL20
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for KLHL20 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for KLHL20
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: KLHL20 (NM_014458)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for KLHL20
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat KLHL20 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for KLHL20
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat KLHL20
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat KLHL20
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat KLHL20

    Additional cDNA sequence: 

    AB026190.1 AJ844466.1 AK001430.1 AK300755.1 AK303487.1 AK308048.1 BC005253.1 BC063418.1 

    9 DOTS entries:

    DT.95289366  DT.40131446  DT.100718206  DT.309511  DT.40121082  DT.75111600  DT.95157784  DT.95244329 
    DT.121408851 

    24/108 AceView cDNA sequences (see all 108):

    BP368847 BQ432642 AI453173 BE677177 CB130282 BU154732 BM916593 AL527651 
    BG034013 CD557577 BU178781 AL705347 BI520238 AI927627 BQ932424 AI125291 
    AI091087 BF058391 AA431612 BC063418 BU164406 AI523210 AA486649 BE973704 

    GeneLoc Exon Structure

    3 Alternative Splicing Database (ASD) splice patterns (SP) for KLHL20    About this scheme

    ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4a · 4b · 4c ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13
    SP1:              -     -                                                                                 
    SP2:              -                                                                                       
    SP3:                                                                                                      


    ECgene alternative splicing isoforms for KLHL20

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    KLHL20 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TATAACTTTT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See KLHL20 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for KLHL20

    SOURCE GeneReport for Unigene cluster: Hs.495035
        SABiosciences Expression via Pathway-Focused PCR Array including KLHL20: 
              Ubiquitin Ligases in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for KLHL20
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat KLHL20
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat KLHL20
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat KLHL20
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for KLHL20

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for KLHL20 gene from 6/25 species (see all 25)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves KLHL201 kelch-like 20 (Drosophila) 82.65(n)
    99.01(a)
      425091  NM_001031329.1  NP_001026500.1 
    lizard
    (Anolis carolinensis)
    Reptilia KLHL206
    --
    99(a)
    1 ↔ 1
    4(71316612-71337011)
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia Str.114272 Transcribed sequence with strong similarity to protein more 83.83(n)    137727720 
    zebrafish
    (Danio rerio)
    Actinopterygii wufc33f092 Danio rerio cDNA clone MGC66288 IMAGE5412607, complete more 78.64(n)    BC057505.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta dbo1 diablo 66.78(n)
    80.94(a)
      53556  NM_080250.2  NP_524989.2 
    worm
    (Caenorhabditis elegans)
    Secernentea R12E2.11 Protein R12E2.1 58.47(n)
    60.52(a)
      172012  NM_058921.3  NP_491322.1 


    ENSEMBL Gene Tree for KLHL20 (if available)
    TreeFam Gene Tree for KLHL20 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for KLHL20 gene
    KLHL172  KLHL182  KLHL52  KLHL122  KEAP12  KLHL282  KLHL42  IPP2  
    KLHL32  KLHL82  KLHL102  KLHL12  KLHL22  
    18/40 SIMAP similar genes for KLHL20 using alignment to 3 protein entries:     KLH20_HUMAN (see all proteins) (see all similar genes):
    KLHL17    KLHL5    KLHL1    KLHL3    KLHL30    KLHL4
    KLHL8    KLHL12    KLHL2    DKFZp686H07112    DKFZp686P15123    KLHL18
    KLHL28    DKFZp761P1717    DKFZp781C1855    KBTBD8    ENC1    KLHL24

    KLHL20 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1028 NCBI SNPs in KLHL20 are shown (see all 1028    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 1 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1929289611,2
    --173682197(+) GTTGCA/CAAAGA 1 -- us2k10--------
    rs1847675971,2
    --173682364(+) GTATCC/TGTGAA 1 -- us2k10--------
    rs75500361,2
    C,F,A,H,--173682365(+) TATCCG/ATGAAA 1 -- us2k121Minor allele frequency- A:0.25NS EA NA WA CSA 1921
    rs1408898131,2
    --173682493(+) AATTAC/TTCCTG 1 -- us2k10--------
    rs795145661,2
    C,--173682677(+) AGAGGG/TCACAA 1 -- us2k10--------
    rs1894771711,2
    --173682735(+) GAATCC/TAGGAT 1 -- us2k10--------
    rs1140882601,2
    F,--173682740(+) TAGGAT/CTGGCC 1 -- us2k11Minor allele frequency- C:0.03WA 118
    rs1447256881,2
    --173682774(+) TTTGCA/GTGTTT 1 -- us2k10--------
    rs1156938471,2
    C,--173682859(+) GACCAG/TCTCCC 1 -- us2k10--------
    rs1415905061,2
    --173683301(+) ACAGTC/TTTTCT 1 -- us2k10--------

    HapMap Linkage Disequilibrium report for KLHL20 (173684080 - 173755840 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for KLHL20: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing KLHL20
    DNA2.0 Custom Variant and Variant Library Synthesis for KLHL20

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    KLHL20 for disorders           About GeneDecksing

    6 diseases for KLHL20:    About MalaCards
    intrahepatic cholangiocarcinoma    prostate cancer, progression of    cholangiocarcinoma    prostate cancer
    prostatitis    hypoxia


    Export disorders for KLHL20 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for KLHL20 gene, integrated from 9 sources (see all 20):
    (articles sorted by number of sources associating them with KLHL20)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Novel kelch-like protein, KLEIP, is involved in actin assembly at cell-cell contact sites of Madin-Darby canine kidney cells. (PubMed id 14668487)1, 2, 3, 9 Hara T.... Miki T. (2004)
    2. The Cullin 3 substrate adaptor KLHL20 mediates DAPK ubiquitination to control interferon responses. (PubMed id 20389280)1, 2, 3 Lee Y.R.... Chen R.H. (2010)
    3. The BTB-Kelch protein KLEIP controls endothelial migration and sprouting angiogenesis. (PubMed id 17395875)1, 2, 9 Nacak T.G....Kroll J. (2007)
    4. The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414)1, 2 Gregory S.G.... Bentley D.R. (2006)
    5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    6. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    7. A proteome-wide, quantitative survey of in vivo ubiqui tylation sites reveals widespread regulatory roles. (PubMed id 21890473)1 Wagner S.A....Choudhary C. (2011)
    8. A Cullin3-KLHL20 Ubiquitin ligase-dependent pathway t argets PML to potentiate HIF-1 signaling and prostate cancer progression. (PubMed id 21840486)1 Yuan W.C....Chen R.H. (2011)
    9. Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (2011)
    10. Kelch-like 20 up-regulates the expression of hypoxia- inducible factor-2I+ through hypoxia- and von Hippel-Lindau tumor suppressor pro tein-independent regulatory mechanisms. (PubMed id 21888897)1 Higashimura Y....Nakano Y. (2011)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 27252 HGNC: 25056 AceView: KLEIP Ensembl:ENSG00000076321 euGenes: HUgn27252
    ECgene: KLHL20 H-InvDB: KLHL20

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for KLHL20 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for KLHL20 gene:
    Search GeneIP for patents involving KLHL20

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for KLHL20  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for KLHL20   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for KLHL20  
     Browse OriGene Protein Over-expression Lysates   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for KLHL20   OriGene 3'-UTR Clone for KLHL20  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for KLHL20   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for KLHL20  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for KLHL20   OriGene Custom Protein Services for KLHL20  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat KLHL20
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing KLHL20
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat KLHL20
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat KLHL20
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat KLHL20
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat KLHL20
     GenScript Custom Purified and Recombinant Proteins Services for KLHL20 GenScript cDNA clones with any tag delivered in your preferred vector for KLHL20
     GenScript Custom Assay Services for KLHL20 GenScript Custom Superior Antibodies Services for KLHL20
     GenScript Custom overexpressing Cell Line Services for KLHL20 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in KLHL20 promoter
     Search Chromatin IP Primers for KLHL20
     RT2 qPCR Primer Assay in human, mouse, rat KLHL20
     Search GNC Networks for KLHL20
     SABiosciences PCR Arrays including human, mouse, rat KLHL20
     Search Tocris compounds for KLHL20
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     KLHL20 antibodies
     KLHL20 proteins
     KLHL20 lysates
     Search for Antibodies for KLHL20 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for KLHL20
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     KLHL20 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for KLHL20
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for KLHL20
     SwitchGear 3'UTR luciferase reporter plasmids for KLHL20
     SwitchGear Promoter luciferase reporter plasmids for KLHL20
     ThermoFisher Antibodies for KLHL20
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat KLHL20
           
    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 27 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      KLHL20 gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 100 solr: 1.4