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Aliases for KLHL18 Gene

Aliases for KLHL18 Gene

  • Kelch-Like Family Member 18 2 3
  • Kelch-Like 18 (Drosophila) 2
  • KIAA0795 4

External Ids for KLHL18 Gene

Summaries for KLHL18 Gene

GeneCards Summary for KLHL18 Gene

KLHL18 (Kelch-Like Family Member 18) is a Protein Coding gene. An important paralog of this gene is KLHL10.

Gene Wiki entry for KLHL18 Gene

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KLHL18 Gene

Genomics for KLHL18 Gene

Genomic Location for KLHL18 Gene

Start:
47,282,786 bp from pter
End:
47,346,816 bp from pter
Size:
64,031 bases
Orientation:
Plus strand

Genomic View for KLHL18 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KLHL18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KLHL18 Gene

Regulatory Elements for KLHL18 Gene

Proteins for KLHL18 Gene

  • Protein details for KLHL18 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O94889-KLH18_HUMAN
    Recommended name:
    Kelch-like protein 18
    Protein Accession:
    O94889
    Secondary Accessions:
    • A8K612
    • Q7Z3E8
    • Q8N125

    Protein attributes for KLHL18 Gene

    Size:
    574 amino acids
    Molecular mass:
    63638 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH32620.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=CAD97920.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};

    Alternative splice isoforms for KLHL18 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for KLHL18 Gene

Proteomics data for KLHL18 Gene at MOPED

Post-translational modifications for KLHL18 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for KLHL18 Gene

No data available for DME Specific Peptides for KLHL18 Gene

Domains for KLHL18 Gene

Gene Families for KLHL18 Gene

HGNC:
  • BTBD :BTB/POZ domain containing
  • KLHL :Kelch-like

UniProtKB/Swiss-Prot:

KLH18_HUMAN
Domain:
  • Contains 1 BACK (BTB/Kelch associated) domain.:
    • O94889
  • Contains 1 BTB (POZ) domain.:
    • O94889
Similarity:
  • Contains 6 Kelch repeats.:
    • O94889
genes like me logo Genes that share domains with KLHL18: view

Function for KLHL18 Gene

Gene Ontology (GO) - Molecular Function for KLHL18 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with KLHL18: view

Phenotypes for KLHL18 Gene

MGI mutant phenotypes for KLHL18:
inferred from 1 alleles
GenomeRNAi human phenotypes for KLHL18:
genes like me logo Genes that share phenotypes with KLHL18: view

miRNA for KLHL18 Gene

miRTarBase miRNAs that target KLHL18

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for KLHL18 Gene

Localization for KLHL18 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for KLHL18 Gene COMPARTMENTS Subcellular localization image for KLHL18 gene
Compartment Confidence
cytosol 3
nucleus 2
cytoskeleton 1
mitochondrion 1

No data available for Gene Ontology (GO) - Cellular Components for KLHL18 Gene

Pathways for KLHL18 Gene

SuperPathways for KLHL18 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KLHL18 Gene

None

No data available for Pathways by source for KLHL18 Gene

Transcripts for KLHL18 Gene

Unigene Clusters for KLHL18 Gene

Kelch-like family member 18:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KLHL18 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7a · 7b · 7c ^ 8 ^ 9a · 9b ^ 10a · 10b ^ 11a · 11b · 11c · 11d ^ 12 ^ 13 ^ 14
SP1: - - - - - -
SP2: - -
SP3: - - - - -
SP4:
SP5: - - -
SP6: - - - - - -
SP7: -
SP8: -
SP9:

Relevant External Links for KLHL18 Gene

GeneLoc Exon Structure for
KLHL18
ECgene alternative splicing isoforms for
KLHL18

Expression for KLHL18 Gene

mRNA expression in normal human tissues for KLHL18 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for KLHL18 Gene

SOURCE GeneReport for Unigene cluster for KLHL18 Gene Hs.517946

genes like me logo Genes that share expressions with KLHL18: view

Orthologs for KLHL18 Gene

This gene was present in the common ancestor of animals.

Orthologs for KLHL18 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia KLHL18 36
  • 99.54 (n)
  • 99.65 (a)
KLHL18 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia KLHL18 37
  • 96 (a)
OneToOne
LOC100847139 36
  • 91.7 (n)
  • 96.69 (a)
dog
(Canis familiaris)
Mammalia KLHL18 36
  • 91.41 (n)
  • 96.86 (a)
KLHL18 37
  • 95 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Klhl18 36
  • 91.11 (n)
  • 98.43 (a)
Klhl18 16
Klhl18 37
  • 98 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia KLHL18 37
  • 92 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 39 (a)
ManyToMany
rat
(Rattus norvegicus)
Mammalia Klhl18 36
  • 90.77 (n)
  • 97.91 (a)
chicken
(Gallus gallus)
Aves KLHL18 36
  • 83.54 (n)
  • 92.39 (a)
KLHL18 37
  • 91 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia KLHL18 37
  • 89 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia klhl18 36
  • 79.63 (n)
  • 88.79 (a)
zebrafish
(Danio rerio)
Actinopterygii klhl18 36
  • 74.63 (n)
  • 83.19 (a)
klhl18 37
  • 82 (a)
OneToOne
wufi18c08 36
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP011142 36
  • 57.95 (n)
  • 55.62 (a)
fruit fly
(Drosophila melanogaster)
Insecta KLHL18 36
  • 58.23 (n)
  • 54.97 (a)
KLHL18 37
  • 53 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea kel-3 36
  • 50 (n)
  • 45.45 (a)
kel-3 37
  • 43 (a)
OneToOne
Species with no ortholog for KLHL18:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for KLHL18 Gene

ENSEMBL:
Gene Tree for KLHL18 (if available)
TreeFam:
Gene Tree for KLHL18 (if available)

Paralogs for KLHL18 Gene

genes like me logo Genes that share paralogs with KLHL18: view

Variants for KLHL18 Gene

Sequence variations from dbSNP and Humsavar for KLHL18 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs295428 -- 47,317,772(+) taggg(G/T)atagt intron-variant
rs295429 -- 47,319,610(+) TGTTT(C/T)GCATT intron-variant
rs295430 -- 47,319,618(+) ATTCC(A/T)CAATA intron-variant
rs295431 -- 47,320,278(+) GCACT(C/T)GAAAT intron-variant
rs295432 -- 47,320,398(+) CAGGT(C/T)TAGAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for KLHL18 Gene

Variant ID Type Subtype PubMed ID
nsv428417 CNV Loss 18775914
nsv876756 CNV Gain 21882294
esv2417653 CNV Deletion 18987734

Relevant External Links for KLHL18 Gene

HapMap Linkage Disequilibrium report
KLHL18

Disorders for KLHL18 Gene

No disorders were found for KLHL18 Gene.

No data available for UniProtKB/Swiss-Prot for KLHL18 Gene

Publications for KLHL18 Gene

  1. Prediction of the coding sequences of unidentified human genes. XI. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 9872452) Nagase T. … Ohara O. (DNA Res. 1998) 2 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. From ORFeome to biology: a functional genomics pipeline. (PMID: 15489336) Wiemann S. … Poustka A. (Genome Res. 2004) 3
  5. The LIFEdb database in 2006. (PMID: 16381901) Mehrle A. … Wiemann S. (Nucleic Acids Res. 2006) 3

Products for KLHL18 Gene

Sources for KLHL18 Gene

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