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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

KLF14 Gene

protein-coding   GIFtS: 47
GCID: GC07M130417

Kruppel-like factor 14

 Explore 3 diseases affiliated with
KLF14 via our new
 Human Malady Compendium 
Biological research products
for KLF14
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Kruppel-Like Factor 141 2
BTEB51 2 3
Basic Transcription Element-Binding Protein 52 3
Transcription Factor BTEB52 3
BTE-Binding Protein 52 3
Krueppel-Like Factor 142

External Ids:    HGNC: 230251   Entrez Gene: 1362592   Ensembl: ENSG000001745957   OMIM: 6093935   UniProtKB: Q8TD943   

Export aliases for KLF14 gene to outside databases

Previous GC identifers: GC07M129819 GC07M129833 GC07M129874 GC07M130068 GC07M124732


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for KLF14:
This gene encodes a member of the Kruppel-like family of transcription factors. The gene exhibits imprinted expression
from the maternal allele in embryonic and extra-embryonic tissues. Expression of this gene is induced by TGF-beta, and
the protein represses TGF-beta receptor II expression. The protein functions as part of a transcriptional co-repressor
complex that also contains the transcriptional regulator SIN3A and histone deacetylase 2. (provided by RefSeq, Nov
2009)

Gene Wiki entry for KLF14


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000007.13  NC_018918.1  NT_007933.15  NT_079596.2  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the KLF14 gene promoter:
         HOXA9   HOXA9B   GATA-3   MyoD   C/EBPalpha   GATA-1   GATA-2   Egr-2   Meis-1a   Meis-1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidKLF14 promoter sequence
   Search SABiosciences Chromatin IP Primers for KLF14

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat KLF14


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 7q32.3   Ensembl cytogenetic band:  7q32.3   HGNC cytogenetic band: 7q32.3

KLF14 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
KLF14 gene location

GeneLoc information about chromosome 7         GeneLoc Exon Structure

GeneLoc location for GC07M130417:  view genomic region     (about GC identifiers)

Start:
130,417,396 bp from pter      End:
130,418,888 bp from pter
Size:
1,493 bases      Orientation:
minus strand

1 alternative location:
Chr7-,CRA_TCAG 129,753,871-129,755,364     

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: KLF14_HUMAN, Q8TD94 (See protein sequence)
Recommended Name: Krueppel-like factor 14  
Size: 323 amino acids; 33124 Da
Subcellular location: Nucleus (By similarity)
Secondary accessions: Q19A42 Q19A43

Explore the universe of human proteins at neXtProt for KLF14: NX_Q8TD94

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q8TD94

  • KLF14 Protein expression data from MOPED and PaxDb:    About this image 
    KLF14 Protein Expression
    REFSEQ proteins: NP_619638.1  
    ENSEMBL proteins: 
     ENSP00000310878  

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    Uscn Proteins for KLF14

    Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IEA--

    KLF14 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    KLF14 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR015880 Znf_C2H2-like
     IPR013087 Znf_C2H2/integrase_DNA-bd
     IPR007087 Znf_C2H2

    Graphical View of Domain Structure for InterPro Entry Q8TD94

    ProtoNet protein and cluster: Q8TD94

    UniProtKB/Swiss-Prot: KLF14_HUMAN, Q8TD94
    Similarity: Belongs to the Sp1 C2H2-type zinc-finger protein family
    Similarity: Contains 3 C2H2-type zinc fingers


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

         Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003677DNA binding IEA--
    GO:0008270zinc ion binding IEA--
         
    KLF14 for ontologies           About GeneDecksing


    Animal Models:
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    In Situ Assay
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    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for KLF14

    STRING Interaction Network Preview (showing 1 interactants - click image to see more details)

    1 Interacting protein for KLF14 (ENSP000003108784) via UniProtKB, MINT, STRING, and/or I2D
    InteractantInteraction Details
    GeneCardExternal ID(s)
    UBCENSP000003448184STRING: ENSP00000344818
    About this table

    Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006355regulation of transcription, DNA-dependent IEA--

    KLF14 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for KLF14
    Search CenterWatch for drugs/clinical trials and news about KLF14 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for KLF14 gene: 
    NM_138693.2  

    Unigene Cluster for KLF14:

    Kruppel-like factor 14
    Hs.125240  [show with all ESTs]
    Unigene Representative Sequence: NM_138693
    1 Ensembl transcript including schematic representation, and UCSC links where relevant:
    ENST00000310992(uc003vqk.2)

    miRNA
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    8/12 QIAGEN miScript miRNA Assays for microRNAs that regulate KLF14 (see all 12):
    hsa-miR-3690 hsa-miR-550a hsa-miR-622 hsa-miR-4306 hsa-miR-3672 hsa-miR-519e* hsa-miR-515-5p hsa-miR-185
    SwitchGear 3'UTR luciferase reporter plasmidKLF14 3' UTR sequence
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    Additional cDNA sequence: AF490374.1 

    1 DOTS entry:

    DT.104452 

    6 AceView cDNA sequences:

    NM_138693 AF490374 AA455939 AA340045 BX100370 AA868945 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    KLF14 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TGGACTCTGG
    KLF14 Expression
    About this image

    KLF14 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    AdiposeVisceral White AdiposeVisceral White AdipocytesAdipose
    Extraembryonic MesodermExtraembryonic Capillary PlexusExtraembryonic AngioblastsEndothelium
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See KLF14 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for KLF14

    SOURCE GeneReport for Unigene cluster: Hs.125240
        SABiosciences Custom PCR Arrays for KLF14
    Primer
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for KLF14

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for KLF14 gene from 4/16 species (see all 16)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    lizard
    (Anolis carolinensis)
    Reptilia --
    --
    4(a)
    possible ortholog
    3(88021848-88042132)
    zebrafish
    (Danio rerio)
    Actinopterygii zgc:1531156
    zgc:153115
    31(a)
    1 → many
    2(6943374-6951681)
    honey bee
    (Apis mellifera)
    Insecta --
    --
    5(a)
    possible ortholog
    GroupUn.224(42583-44730)
    worm
    (Caenorhabditis elegans)
    Secernentea sptf-16
    Specificity Protein) Transcription Factor family m...
    10(a)
    possible ortholog
    I(10366612-10371685)


    ENSEMBL Gene Tree for KLF14 (if available)
    TreeFam Gene Tree for KLF14 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for KLF14 gene
    KLF12  KLF112  KLF62  KLF102  KLF42  KLF52  KLF162  KLF22  
    KLF152  KLF92  KLF122  KLF32  KLF72  KLF132  KLF82  
    11 SIMAP similar genes for KLF14 using alignment to 2 protein entries:     KLF14_HUMAN (see all proteins):
    KLF7    ZNF697    ZNF323    ZNF702P    KLF11    TIEG2
    KLF16    KLF6    SP8    KLF13    KLF12

    KLF14 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/72 NCBI SNPs in KLF14 are shown (see all 72    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 7 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs734729341,2
    C--129753432(+) TATTTC/TCCTGA 1 -- ds50012Minor allele frequency- T:0.05WA 120
    rs347431971,2
    C--129753662(+) GCAAGC/TGCAGG 1 -- ds50013Minor allele frequency- T:0.02NA WA 240
    rs672286991,2
    C--129753974(+) TCCGCC/-CTGGT 1 -- ut311Minor allele frequency- -:0.00NA 2
    rs39095531,2
    C,F,A,H--129754290(-) CCATCC/TTTCTT 1 -- ut3116Minor allele frequency- T:0.06NS EA NA WA 2062
    rs1117316781,2
    C--129755220(+) GAGCCA/G/TGCGGC 3 A syn12NA 122
    rs78075481,2
    A--129755421(+) gccgcA/Cgccgc 1 -- us2k10--------
    rs1125147041,2
    C--129755545(+) CGCGGC/G/TCCCCC 1 -- us2k11CSA 1
    rs78082831,2
    C--129755650(+) CAGTCA/GGAACT 1 -- us2k10--------
    rs18629231,2
    --129755876(+) CAAATA/GTCCCC 1 -- us2k10--------
    rs734729371,2
    C--129756251(+) TTATCT/GTGTAA 1 -- us2k12Minor allele frequency- G:0.05WA 120

    HapMap Linkage Disequilibrium report for KLF14 (130417396 - 130418888 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for KLF14: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing KLF14
    DNA2.0 Custom Variant and Variant Library Synthesis for KLF14

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    KLF14 for disorders           About GeneDecksing

    OMIM gene information: 609393    OMIM disorders: --

    3 diseases for KLF14:    About MalaCards
    basal cell carcinoma    cholesterol    carcinoma

    Human Genome Epidemiology (HuGE) Navigator: KLF14 (6 documents)

    Export disorders for KLF14 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for KLF14 gene, integrated from 9 sources (see all 11):
    (articles sorted by number of sources associating them with KLF14)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Identification of the imprinted KLF14 transcription factor undergoing human-specific accelerated evolution. (PubMed id 17480121)1, 3 Parker-Katiraee L....Scherer S.W. (2007)
    2. Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (2011)
    3. Identification of an imprinted master trans regulator at the KLF14 locus related to multiple metabolic phenotypes. (PubMed id 21572415)1 Small K.S....McCarthy M.I. (2011)
    4. Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis. (PubMed id 20581827)1 Voight B.F.... . (2010)
    5. Biological, clinical and population relevance of 95 l oci for blood lipids. (PubMed id 20686565)1 Teslovich T.M....Kathiresan S. (2010)
    6. Genetic risk reclassification for type 2 diabetes by age below or above 50 years using 40 type 2 diabetes risk single nucleotide pol ymorphisms. (PubMed id 20889853)1 de Miguel-Yanes J.M....Meigs J.B. (2010)
    7. Forty-three loci associated with plasma lipoprotein s ize, concentration, and cholesterol content in genome-wide analysis. (PubMed id 19936222)1 Chasman D.I....Ridker P.M. (2009)
    8. New common variants affecting susceptibility to basal cell carcinoma. (PubMed id 19578363)1 Stacey S.N....Stefansson K. (2009)
    9. Silencing of the transforming growth factor-beta (TGFbeta) receptor II by Kruppel-like factor 14 underscores the importance of a negative feedback mechanism in TGFbeta signaling. (PubMed id 19088080)1 Truty M.J....Urrutia R. (2009)
    10. Mammalian SP/KLF transcription factors: bring in the family. (PubMed id 15820306)1 Suske G....Philipsen S. (2005)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 136259 HGNC: 23025 AceView: KLF14 Ensembl:ENSG00000174595 euGenes: HUgn136259
    ECgene: KLF14 H-InvDB: KLF14

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for KLF14 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for KLF14 gene:
    Search GeneIP for patents involving KLF14

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
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     Browse OriGene Antibodies   OriGene shRNA RFP for KLF14  
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     OriGene Custom Antibody Services for KLF14   OriGene Custom Protein Services for KLF14  
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     Regulatory tfbs in KLF14 promoter
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     KLF14 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for KLF14
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     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat KLF14
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    Sirion Biotech Customized:
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     adenovirus for potent knockdown of KLF14
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     stable overexpressing cell line services for KLF14
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    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 27 Apr 2013 , 14 May 2013

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