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Aliases for KIRREL3-AS3 Gene

Subcategory (RNA class) for KIRREL3-AS3 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for KIRREL3-AS3 Gene

  • KIRREL3 Antisense RNA 3 2 3
  • KIRREL3 Antisense RNA 3 (Non-Protein Coding) 2 3
  • Proline Rich 10 2 3
  • NCRNA00288 3 4
  • PRR10 3 4
  • KIRREL3 Antisense Gene Protein 1 4
  • Non-Protein Coding RNA 288 2
  • KIRREL3 Antisense RNA 1 4
  • Proline-Rich Protein 10 4

External Ids for KIRREL3-AS3 Gene

ORGUL Members for KIRREL3-AS3 Gene

Previous Symbols for KIRREL3-AS3 Gene

  • PRR10
  • NCRNA00288

Summaries for KIRREL3-AS3 Gene

GeneCards Summary for KIRREL3-AS3 Gene

KIRREL3-AS3 (KIRREL3 Antisense RNA 3) is a RNA Gene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KIRREL3-AS3 Gene

Genomics for KIRREL3-AS3 Gene

Genomic Location for KIRREL3-AS3 Gene

Start:
127,002,910 bp from pter
End:
127,006,058 bp from pter
Size:
3,149 bases
Orientation:
Plus strand

Genomic View for KIRREL3-AS3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KIRREL3-AS3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIRREL3-AS3 Gene

No data available for Regulatory Elements for KIRREL3-AS3 Gene

Proteins for KIRREL3-AS3 Gene

  • Protein details for KIRREL3-AS3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N7Y1-KIAS3_HUMAN
    Recommended name:
    Putative uncharacterized protein KIRREL3-AS3
    Protein Accession:
    Q8N7Y1
    Secondary Accessions:
    • Q14CX1

    Protein attributes for KIRREL3-AS3 Gene

    Size:
    241 amino acids
    Molecular mass:
    25772 Da
    Quaternary structure:
    No Data Available

neXtProt entry for KIRREL3-AS3 Gene

Proteomics data for KIRREL3-AS3 Gene at MOPED

Post-translational modifications for KIRREL3-AS3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KIRREL3-AS3 Gene

Domains for KIRREL3-AS3 Gene

Gene Families for KIRREL3-AS3 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for KIRREL3-AS3 Gene

ProtoNet:
genes like me logo Genes that share domains with KIRREL3-AS3: view

No data available for UniProtKB/Swiss-Prot for KIRREL3-AS3 Gene

Function for KIRREL3-AS3 Gene

Gene Ontology (GO) - Molecular Function for KIRREL3-AS3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with KIRREL3-AS3: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for KIRREL3-AS3 Gene

Localization for KIRREL3-AS3 Gene

No data available for Gene Ontology (GO) - Cellular Components for KIRREL3-AS3 Gene

Pathways for KIRREL3-AS3 Gene

SuperPathways for KIRREL3-AS3 Gene

No Data Available

Interacting Proteins for KIRREL3-AS3 Gene

Selected Interacting proteins: Q8N7Y1-KIAS3_HUMAN for KIRREL3-AS3 Gene via UniProtKB

Symbol External ID(s) Details
PSMA3

Gene Ontology (GO) - Biological Process for KIRREL3-AS3 Gene

None

No data available for Pathways by source for KIRREL3-AS3 Gene

Transcripts for KIRREL3-AS3 Gene

mRNA/cDNA for KIRREL3-AS3 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KIRREL3-AS3 Gene

KIRREL3 antisense RNA 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KIRREL3-AS3 Gene

No ASD Table

Relevant External Links for KIRREL3-AS3 Gene

GeneLoc Exon Structure for
KIRREL3-AS3
ECgene alternative splicing isoforms for
KIRREL3-AS3

Expression for KIRREL3-AS3 Gene

mRNA expression in normal human tissues for KIRREL3-AS3 Gene

SOURCE GeneReport for Unigene cluster for KIRREL3-AS3 Gene Hs.730461

genes like me logo Genes that share expressions with KIRREL3-AS3: view

Orthologs for KIRREL3-AS3 Gene

Evolution for KIRREL3-AS3 Gene

ENSEMBL:
Gene Tree for KIRREL3-AS3 (if available)
TreeFam:
Gene Tree for KIRREL3-AS3 (if available)

No data available for Orthologs for KIRREL3-AS3 Gene

Paralogs for KIRREL3-AS3 Gene

Selected SIMAP similar genes for KIRREL3-AS3 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with KIRREL3-AS3: view

No data available for Paralogs for KIRREL3-AS3 Gene

Variants for KIRREL3-AS3 Gene

Sequence variations from dbSNP and Humsavar for KIRREL3-AS3 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs494442 -- 127,003,697(+) GCCGG(C/T)GGGAT nc-transcript-variant
rs2508557 -- 127,002,890(-) CAGAC(A/G)CCTGT upstream-variant-2KB
rs7115473 -- 127,003,331(+) CCCGC(G/T)GCCTC nc-transcript-variant
rs7927972 -- 127,004,334(+) GTATG(C/T)GGGAA intron-variant
rs7941136 -- 127,004,265(+) GGAAT(A/G)ACTAT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for KIRREL3-AS3 Gene

Variant ID Type Subtype PubMed ID
nsv539 CNV Insertion 18451855

Relevant External Links for KIRREL3-AS3 Gene

HapMap Linkage Disequilibrium report
KIRREL3-AS3

Disorders for KIRREL3-AS3 Gene

No disorders were found for KIRREL3-AS3 Gene.

No data available for UniProtKB/Swiss-Prot for KIRREL3-AS3 Gene

Publications for KIRREL3-AS3 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. New genetic associations detected in a host response study to hepatitis B vaccine. (PMID: 20237496) Davila S. … Seielstad M. (Genes Immun. 2010) 3
  4. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  5. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 4

Products for KIRREL3-AS3 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate KIRREL3-AS3
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Block miRNA regulation of KIRREL3-AS3 using miScript Target Protectors

    Sources for KIRREL3-AS3 Gene

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