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Aliases for KIRREL3-AS3 Gene

Subcategory (RNA class) for KIRREL3-AS3 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for KIRREL3-AS3 Gene

  • KIRREL3 Antisense RNA 3 2 3
  • KIRREL3 Antisense RNA 3 (Non-Protein Coding) 2 3
  • Proline Rich 10 2 3
  • NCRNA00288 3 4
  • PRR10 3 4
  • KIRREL3 Antisense Gene Protein 1 4
  • Non-Protein Coding RNA 288 2
  • KIRREL3 Antisense RNA 1 4
  • Proline-Rich Protein 10 4

External Ids for KIRREL3-AS3 Gene

ORGUL Members for KIRREL3-AS3 Gene

Previous HGNC Symbols for KIRREL3-AS3 Gene

  • PRR10
  • NCRNA00288

Previous GeneCards Identifiers for KIRREL3-AS3 Gene

  • GC11U901880
  • GC11P126876

Summaries for KIRREL3-AS3 Gene

GeneCards Summary for KIRREL3-AS3 Gene

KIRREL3-AS3 (KIRREL3 Antisense RNA 3) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KIRREL3-AS3 Gene

Genomics for KIRREL3-AS3 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for KIRREL3-AS3 Gene

Start:
127,002,910 bp from pter
End:
127,006,058 bp from pter
Size:
3,149 bases
Orientation:
Plus strand

Genomic View for KIRREL3-AS3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KIRREL3-AS3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIRREL3-AS3 Gene

No data available for Regulatory Elements for KIRREL3-AS3 Gene

Proteins for KIRREL3-AS3 Gene

  • Protein details for KIRREL3-AS3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N7Y1-KIAS3_HUMAN
    Recommended name:
    Putative uncharacterized protein KIRREL3-AS3
    Protein Accession:
    Q8N7Y1
    Secondary Accessions:
    • Q14CX1

    Protein attributes for KIRREL3-AS3 Gene

    Size:
    241 amino acids
    Molecular mass:
    25772 Da
    Quaternary structure:
    No Data Available

neXtProt entry for KIRREL3-AS3 Gene

Proteomics data for KIRREL3-AS3 Gene at MOPED

Post-translational modifications for KIRREL3-AS3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KIRREL3-AS3 Gene

Domains for KIRREL3-AS3 Gene

Gene Families for KIRREL3-AS3 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for KIRREL3-AS3 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KIRREL3-AS3: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KIRREL3-AS3 Gene

Function for KIRREL3-AS3 Gene

Gene Ontology (GO) - Molecular Function for KIRREL3-AS3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with KIRREL3-AS3: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for KIRREL3-AS3 Gene

Localization for KIRREL3-AS3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KIRREL3-AS3 Gene

Pathways for KIRREL3-AS3 Gene

SuperPathways for KIRREL3-AS3 Gene

No Data Available

Interacting Proteins for KIRREL3-AS3 Gene

Selected Interacting proteins: Q8N7Y1-KIAS3_HUMAN for KIRREL3-AS3 Gene via UniProtKB

Symbol External ID(s) Details
PSMA3

Gene Ontology (GO) - Biological Process for KIRREL3-AS3 Gene

None

No data available for Pathways by source for KIRREL3-AS3 Gene

Transcripts for KIRREL3-AS3 Gene

mRNA/cDNA for KIRREL3-AS3 Gene

(3) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KIRREL3-AS3 Gene

KIRREL3 antisense RNA 3:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate KIRREL3-AS3
    • Block miRNA regulation of KIRREL3-AS3 using miScript Target Protectors

    Inhibitory RNA Products

    Primer Products

    • OriGene qSTAR qPCR primer pairs in human,mouse,rat for KIRREL3-AS3
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for KIRREL3-AS3 Gene

    No ASD Table

    Relevant External Links for KIRREL3-AS3 Gene

    GeneLoc Exon Structure for
    KIRREL3-AS3
    ECgene alternative splicing isoforms for
    KIRREL3-AS3

    Expression for KIRREL3-AS3 Gene

    mRNA expression in normal human tissues for KIRREL3-AS3 Gene

    SOURCE GeneReport for Unigene cluster for KIRREL3-AS3 Gene Hs.730461

    genes like me logo Genes that share expressions with KIRREL3-AS3: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for KIRREL3-AS3 Gene

    Orthologs for KIRREL3-AS3 Gene

    Evolution for KIRREL3-AS3 Gene

    ENSEMBL:
    Gene Tree for KIRREL3-AS3 (if available)
    TreeFam:
    Gene Tree for KIRREL3-AS3 (if available)

    No data available for Orthologs for KIRREL3-AS3 Gene

    Paralogs for KIRREL3-AS3 Gene

    Selected SIMAP similar genes for KIRREL3-AS3 Gene using alignment to 1 proteins:

    genes like me logo Genes that share paralogs with KIRREL3-AS3: view

    No data available for Paralogs for KIRREL3-AS3 Gene

    Variants for KIRREL3-AS3 Gene

    Sequence variations from dbSNP and Humsavar for KIRREL3-AS3 Gene

    SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
    rs494442 -- 127,003,697(+) GCCGG(C/T)GGGAT nc-transcript-variant
    rs2508557 -- 127,002,890(-) CAGAC(A/G)CCTGT upstream-variant-2KB
    rs7115473 -- 127,003,331(+) CCCGC(G/T)GCCTC nc-transcript-variant
    rs7927972 -- 127,004,334(+) GTATG(C/T)GGGAA intron-variant
    rs7941136 -- 127,004,265(+) GGAAT(A/G)ACTAT nc-transcript-variant

    Structural Variations from Database of Genomic Variants (DGV) for KIRREL3-AS3 Gene

    Variant ID Type Subtype PubMed ID
    nsv539 CNV Insertion 18451855

    Relevant External Links for KIRREL3-AS3 Gene

    HapMap Linkage Disequilibrium report
    KIRREL3-AS3

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for KIRREL3-AS3 Gene

    Disorders for KIRREL3-AS3 Gene

    No disorders were found for KIRREL3-AS3 Gene.

    No data available for UniProtKB/Swiss-Prot for KIRREL3-AS3 Gene

    Publications for KIRREL3-AS3 Gene

    1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
    3. New genetic associations detected in a host response study to hepatitis B vaccine. (PMID: 20237496) Davila S. … Seielstad M. (Genes Immun. 2010) 3
    4. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
    5. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 4

    Products for KIRREL3-AS3 Gene

    • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
    • QIAGEN qRT-PCR Assays for microRNAs that regulate KIRREL3-AS3
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Block miRNA regulation of KIRREL3-AS3 using miScript Target Protectors

      Sources for KIRREL3-AS3 Gene

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