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Aliases for KIRREL3-AS2 Gene

Subcategory (RNA class) for KIRREL3-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KIRREL3-AS2 Gene

  • KIRREL3 Antisense RNA 2 2 3 5
  • KIRREL3 Antisense RNA 2 (Non-Protein Coding) 2

External Ids for KIRREL3-AS2 Gene

Previous GeneCards Identifiers for KIRREL3-AS2 Gene

  • GC00U933261
  • GC11P126811

Summaries for KIRREL3-AS2 Gene

GeneCards Summary for KIRREL3-AS2 Gene

KIRREL3-AS2 (KIRREL3 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for KIRREL3-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KIRREL3-AS2 Gene

Genomics for KIRREL3-AS2 Gene

GeneHancer (GH) Regulatory Elements for KIRREL3-AS2 Gene

Promoters and enhancers for KIRREL3-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I126916 Enhancer 0.9 Ensembl ENCODE 11.2 -22.7 -22738 2.8 PKNOX1 EBF1 BATF IRF4 FOSL1 POLR2A NFE2 FOSL2 FOS IKZF2 ENSG00000254938 KIRREL3-AS2 LOC105369558 KIRREL3-AS3 KIRREL3 PIR59930 GC11P126915 ENSG00000279358 LOC105369559
GH11I126970 Enhancer 0.8 FANTOM5 ENCODE dbSUPER 11.3 +28.4 28382 0.2 CTCF EGR1 KIRREL3 LOC105369558 KIRREL3-AS2 ENSG00000254938 MIR3167
GH11I126971 Enhancer 0.6 ENCODE dbSUPER 11.3 +29.3 29274 0.2 CTCF RAD21 LOC105369558 ENSG00000254938 KIRREL3-AS2 KIRREL3 MIR3167
GH11I126969 Enhancer 0.5 ENCODE dbSUPER 11.3 +28.7 28674 0.2 CTCF LOC105369558 KIRREL3-AS2 ENSG00000254938 KIRREL3 MIR3167
GH11I126963 Enhancer 0.4 ENCODE 11.3 +23.1 23060 1.5 SP1 FOSL2 KIRREL3-AS2 ENSG00000254938 LOC105369558 KIRREL3 MIR3167
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around KIRREL3-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KIRREL3-AS2 Gene

Genomic Locations for KIRREL3-AS2 Gene
chr11:126,940,746-126,945,090
(GRCh38/hg38)
Size:
4,345 bases
Orientation:
Plus strand
chr11:126,810,642-126,814,986
(GRCh37/hg19)

Genomic View for KIRREL3-AS2 Gene

Genes around KIRREL3-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KIRREL3-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KIRREL3-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIRREL3-AS2 Gene

Proteins for KIRREL3-AS2 Gene

Post-translational modifications for KIRREL3-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KIRREL3-AS2 Gene

Domains & Families for KIRREL3-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KIRREL3-AS2 Gene

Function for KIRREL3-AS2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KIRREL3-AS2 Gene

Localization for KIRREL3-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KIRREL3-AS2 Gene

Pathways & Interactions for KIRREL3-AS2 Gene

SuperPathways for KIRREL3-AS2 Gene

No Data Available

Interacting Proteins for KIRREL3-AS2 Gene

Gene Ontology (GO) - Biological Process for KIRREL3-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KIRREL3-AS2 Gene

Drugs & Compounds for KIRREL3-AS2 Gene

No Compound Related Data Available

Transcripts for KIRREL3-AS2 Gene

mRNA/cDNA for KIRREL3-AS2 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KIRREL3-AS2 Gene

KIRREL3 antisense RNA 2:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KIRREL3-AS2 Gene

No ASD Table

Relevant External Links for KIRREL3-AS2 Gene

GeneLoc Exon Structure for
KIRREL3-AS2
ECgene alternative splicing isoforms for
KIRREL3-AS2

Expression for KIRREL3-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KIRREL3-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for KIRREL3-AS2 Gene

This gene is overexpressed in Testis (x43.0).

SOURCE GeneReport for Unigene cluster for KIRREL3-AS2 Gene:

Hs.319053
genes like me logo Genes that share expression patterns with KIRREL3-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KIRREL3-AS2 Gene

Orthologs for KIRREL3-AS2 Gene

Evolution for KIRREL3-AS2 Gene

ENSEMBL:
Gene Tree for KIRREL3-AS2 (if available)
TreeFam:
Gene Tree for KIRREL3-AS2 (if available)

No data available for Orthologs for KIRREL3-AS2 Gene

Paralogs for KIRREL3-AS2 Gene

No data available for Paralogs for KIRREL3-AS2 Gene

Variants for KIRREL3-AS2 Gene

Sequence variations from dbSNP and Humsavar for KIRREL3-AS2 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000523666 -- 126,942,185(+) G/T intron_variant
rs1000823634 -- 126,941,955(+) A/G/T intron_variant
rs1001763112 -- 126,943,628(+) G/T intron_variant
rs1001821766 -- 126,943,288(+) A/T intron_variant
rs1002520268 -- 126,944,765(+) C/T intron_variant

Additional Variant Information for KIRREL3-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KIRREL3-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KIRREL3-AS2 Gene

Disorders for KIRREL3-AS2 Gene

Additional Disease Information for KIRREL3-AS2

No disorders were found for KIRREL3-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KIRREL3-AS2 Gene

Publications for KIRREL3-AS2 Gene

  1. A genome-wide association study identifies protein quantitative trait loci (pQTLs). (PMID: 18464913) Melzer D … Ferrucci L (PLoS genetics 2008) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for KIRREL3-AS2 Gene

Sources for KIRREL3-AS2 Gene

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