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Aliases for KIRREL3-AS2 Gene

Subcategory (RNA class) for KIRREL3-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for KIRREL3-AS2 Gene

  • KIRREL3 Antisense RNA 2 2 3 5
  • KIRREL3 Antisense RNA 2 (Non-Protein Coding) 2

External Ids for KIRREL3-AS2 Gene

Previous GeneCards Identifiers for KIRREL3-AS2 Gene

  • GC00U933261
  • GC11P126811

Summaries for KIRREL3-AS2 Gene

GeneCards Summary for KIRREL3-AS2 Gene

KIRREL3-AS2 (KIRREL3 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KIRREL3-AS2 Gene

Genomics for KIRREL3-AS2 Gene

Regulatory Elements for KIRREL3-AS2 Gene

Enhancers for KIRREL3-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F126963 0.6 ENCODE 11.3 +23.1 23060 1.5 FOSL1 JUND BHLHE40 FOS MAFK KIRREL3-AS2 ENSG00000254938 LOC105369558 KIRREL3 MIR3167
GH11F126970 1 FANTOM5 ENCODE 11.3 +28.4 28382 0.2 CTCF KDM1A KIRREL3 LOC105369558 ENSG00000254938 KIRREL3-AS2 MIR3167
GH11F126969 1.1 ENCODE 11.3 +28.7 28674 0.2 CTCF ZNF316 EMSY LOC105369558 ENSG00000254938 KIRREL3-AS2 KIRREL3 MIR3167
GH11F126971 0.5 ENCODE 11.3 +29.3 29274 0.2 ARID1B CTCF ZNF316 SMC3 MAFG EMSY RAD21 LOC105369558 ENSG00000254938 KIRREL3-AS2 KIRREL3 MIR3167
GH11F126916 1.1 Ensembl ENCODE 11.1 -22.7 -22738 2.8 PKNOX1 RFX1 BHLHE40 EBF1 TBX21 JUND ATF3 IKZF1 NFE2 FOS KIRREL3-AS2 ENSG00000254938 LOC105369558 KIRREL3-AS3 KIRREL3 GC11P126915 PIR59930 ENSG00000279358
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around KIRREL3-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Location for KIRREL3-AS2 Gene

126,940,746 bp from pter
126,945,090 bp from pter
4,345 bases
Plus strand

Genomic View for KIRREL3-AS2 Gene

Genes around KIRREL3-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KIRREL3-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KIRREL3-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIRREL3-AS2 Gene

Proteins for KIRREL3-AS2 Gene

Post-translational modifications for KIRREL3-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KIRREL3-AS2 Gene

Domains & Families for KIRREL3-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KIRREL3-AS2 Gene

Function for KIRREL3-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KIRREL3-AS2 Gene

Localization for KIRREL3-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KIRREL3-AS2 Gene

Pathways & Interactions for KIRREL3-AS2 Gene

SuperPathways for KIRREL3-AS2 Gene

No Data Available

Interacting Proteins for KIRREL3-AS2 Gene

Gene Ontology (GO) - Biological Process for KIRREL3-AS2 Gene


No data available for Pathways by source and SIGNOR curated interactions for KIRREL3-AS2 Gene

Transcripts for KIRREL3-AS2 Gene

mRNA/cDNA for KIRREL3-AS2 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KIRREL3-AS2 Gene

KIRREL3 antisense RNA 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KIRREL3-AS2 Gene

No ASD Table

Relevant External Links for KIRREL3-AS2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for KIRREL3-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KIRREL3-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for KIRREL3-AS2 Gene

This gene is overexpressed in Testis (x43.0).

SOURCE GeneReport for Unigene cluster for KIRREL3-AS2 Gene:

genes like me logo Genes that share expression patterns with KIRREL3-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for KIRREL3-AS2 Gene

Orthologs for KIRREL3-AS2 Gene

Evolution for KIRREL3-AS2 Gene

Gene Tree for KIRREL3-AS2 (if available)
Gene Tree for KIRREL3-AS2 (if available)

No data available for Orthologs for KIRREL3-AS2 Gene

Paralogs for KIRREL3-AS2 Gene

No data available for Paralogs for KIRREL3-AS2 Gene

Variants for KIRREL3-AS2 Gene

Sequence variations from dbSNP and Humsavar for KIRREL3-AS2 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs111900999 -- 126,943,596(+) ATATC(A/G)AATAC intron-variant
rs11220667 -- 126,939,548(+) GTGGC(A/G)TTTCC intron-variant, upstream-variant-2KB
rs11220669 -- 126,942,296(+) CACGC(C/T)TGGCA intron-variant, upstream-variant-2KB
rs11220670 -- 126,944,048(+) CTACC(C/T)GGAAG intron-variant
rs112394781 -- 126,944,901(+) TTCTG(C/T)CCTCT intron-variant

Relevant External Links for KIRREL3-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KIRREL3-AS2 Gene

Disorders for KIRREL3-AS2 Gene

Relevant External Links for KIRREL3-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for KIRREL3-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KIRREL3-AS2 Gene

Publications for KIRREL3-AS2 Gene

  1. A genome-wide association study identifies protein quantitative trait loci (pQTLs). (PMID: 18464913) Melzer D. … Ferrucci L. (PLoS Genet. 2008) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for KIRREL3-AS2 Gene

Sources for KIRREL3-AS2 Gene

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