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Aliases for KIF9-AS1 Gene

Subcategory (RNA class) for KIF9-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KIF9-AS1 Gene

  • KIF9 Antisense RNA 1 2 3 5

External Ids for KIF9-AS1 Gene

Previous GeneCards Identifiers for KIF9-AS1 Gene

  • GC03P047205

Summaries for KIF9-AS1 Gene

GeneCards Summary for KIF9-AS1 Gene

KIF9-AS1 (KIF9 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KIF9-AS1 Gene

Genomics for KIF9-AS1 Gene

Regulatory Elements for KIF9-AS1 Gene

Enhancers for KIF9-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F047140 1.1 Ensembl ENCODE 12.4 -22.5 -22470 3.0 HDGF TBP ZBTB40 CEBPB TBX21 RCOR2 IKZF1 CEBPA NBN ZBTB33 NBEAL2 SETD2 KIF9-AS1 KIF9 KLHL18 PTPN23 PTH1R MRPL57P3
GH03F047266 1.2 Ensembl ENCODE 10.9 +102.6 102616 1.2 HDAC1 PKNOX1 CBX3 TBL1XR1 ZNF366 FOS JUNB ZEB2 MEF2D MAFF NBEAL2 SETD2 KIF9-AS1 KLHL18 SNORD13P3
GH03F047346 1.2 Ensembl ENCODE 10.7 +182.9 182853 1.6 PKNOX1 ARNT CREB3L1 YBX1 ZNF121 GATA2 NCOA1 REST TBX21 MBD2 NBEAL2 KIF9 KLHL18 ZNF589 FCF1P2 KIF9-AS1 SETD2 CCDC12 SCAP ENSG00000280173
GH03F047313 1.2 Ensembl ENCODE 10.7 +150.5 150504 2.1 ATF1 ARNT CREB3L1 ELK1 GATA2 NCOA1 REST SMARCA4 MYNN NBN KIF9 KLHL18 SETD2 ZNF589 FCF1P2 KIF9-AS1 PTH1R MYL3 GC03P047316
GH03F047133 1 FANTOM5 Ensembl 12.5 -29.6 -29570 2.4 MTA2 TAL1 JUNB TBX21 ARID1B ZNF316 NCOR1 CBX5 IKZF1 ZNF143 NBEAL2 SETD2 KIF9-AS1 CCDC12 PRSS45 PRSS42 MRPL57P3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KIF9-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for KIF9-AS1 Gene

Chromosome:
3
Start:
47,164,370 bp from pter
End:
47,246,601 bp from pter
Size:
82,232 bases
Orientation:
Plus strand

Genomic View for KIF9-AS1 Gene

Genes around KIF9-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KIF9-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KIF9-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIF9-AS1 Gene

Proteins for KIF9-AS1 Gene

Post-translational modifications for KIF9-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KIF9-AS1 Gene

Domains & Families for KIF9-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KIF9-AS1 Gene

Function for KIF9-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KIF9-AS1 Gene

Localization for KIF9-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KIF9-AS1 Gene

Pathways & Interactions for KIF9-AS1 Gene

SuperPathways for KIF9-AS1 Gene

No Data Available

Interacting Proteins for KIF9-AS1 Gene

Gene Ontology (GO) - Biological Process for KIF9-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KIF9-AS1 Gene

Transcripts for KIF9-AS1 Gene

mRNA/cDNA for KIF9-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KIF9-AS1 Gene

KIF9 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KIF9-AS1 Gene

No ASD Table

Relevant External Links for KIF9-AS1 Gene

GeneLoc Exon Structure for
KIF9-AS1
ECgene alternative splicing isoforms for
KIF9-AS1

Expression for KIF9-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KIF9-AS1 Gene

SOURCE GeneReport for Unigene cluster for KIF9-AS1 Gene:

Hs.570631
genes like me logo Genes that share expression patterns with KIF9-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for KIF9-AS1 Gene

Orthologs for KIF9-AS1 Gene

Evolution for KIF9-AS1 Gene

ENSEMBL:
Gene Tree for KIF9-AS1 (if available)
TreeFam:
Gene Tree for KIF9-AS1 (if available)

No data available for Orthologs for KIF9-AS1 Gene

Paralogs for KIF9-AS1 Gene

No data available for Paralogs for KIF9-AS1 Gene

Variants for KIF9-AS1 Gene

Sequence variations from dbSNP and Humsavar for KIF9-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs10710650 -- 47,200,041(+) TTCTC(-/A)AAAAA intron-variant
rs10865944 -- 47,173,624(+) CAAAA(A/C)AAAAC intron-variant
rs10865945 -- 47,187,892(+) TGTTG(C/T)TCTGT intron-variant
rs111281387 -- 47,183,947(+) ATTTA(-/T)TTTTT intron-variant
rs111284265 -- 47,200,483(+) CTTAA(C/T)TTTGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for KIF9-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv590211 CNV gain 21841781
nsv590210 CNV loss 21841781
nsv428417 CNV loss 18775914
nsv3801 CNV deletion 18451855
nsv238095 CNV deletion 16902084
nsv1007714 CNV gain 25217958
esv3596077 CNV gain 21293372
esv3425791 CNV duplication 20981092
esv3391060 CNV duplication 20981092
esv3386423 CNV duplication 20981092
esv3382124 CNV insertion 20981092
esv3343630 CNV duplication 20981092
dgv1373e212 CNV gain 25503493

Relevant External Links for KIF9-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KIF9-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for KIF9-AS1 Gene

Disorders for KIF9-AS1 Gene

Relevant External Links for KIF9-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KIF9-AS1

No disorders were found for KIF9-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KIF9-AS1 Gene

Publications for KIF9-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for KIF9-AS1 Gene

Sources for KIF9-AS1 Gene

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