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Aliases for KIF27 Gene

Aliases for KIF27 Gene

  • Kinesin Family Member 27 2 3 5

External Ids for KIF27 Gene

Previous GeneCards Identifiers for KIF27 Gene

  • GC09M080006
  • GC09M081908
  • GC09M083681
  • GC09M085641
  • GC09M086451
  • GC09M056276

Summaries for KIF27 Gene

Entrez Gene Summary for KIF27 Gene

  • This gene is a member of the KIF27 (kinesin 4) sub-family of the mammalian kinesin family. The gene is an ortholog of the Drosophila Cos2 gene, which plays an important role in the Hedgehog signaling pathway. The encoded protein contains an N-terminal motor domain which includes nucleotide-binding and microtubule-interacting regions, a stalk domain containing a predicted coiled coil motif and a C-terminal tail domain. Alternatively spliced transcript variants have been observed for this gene. Pseudogenes associated with this gene are located on chromosome 9. [provided by RefSeq, Dec 2012]

GeneCards Summary for KIF27 Gene

KIF27 (Kinesin Family Member 27) is a Protein Coding gene. Among its related pathways are Vesicle-mediated transport and Factors involved in megakaryocyte development and platelet production. GO annotations related to this gene include ATPase activity and microtubule motor activity. An important paralog of this gene is KIF7.

UniProtKB/Swiss-Prot for KIF27 Gene

  • Plays an essential role in motile ciliogenesis.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KIF27 Gene

Genomics for KIF27 Gene

Regulatory Elements for KIF27 Gene

Enhancers for KIF27 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F083620 1.6 FANTOM5 Ensembl ENCODE 10.3 +298.0 298049 5.3 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF48 YY1 ELK1 ZNF143 KLF7 LOC105376114 IDNK KIF27 UBQLN1 GKAP1 GC09M083666
GH09F083986 1.3 Ensembl ENCODE 10.5 -66.2 -66205 3.1 PKNOX1 MLX ARID4B DMAP1 ZNF2 YY1 FOS SP5 MXD4 REST KIF27 RMI1 GC09P083995
GH09F083885 1.2 Ensembl ENCODE 10.9 +35.4 35410 1.7 ZSCAN9 RARA RCOR1 FOS MIXL1 THAP11 ZNF362 CEBPB PPARG MIER3 KIF27 IDNK GKAP1 LOC105376335 ENSG00000231616
GH09F083961 1.1 Ensembl ENCODE 10.9 -41.0 -41016 1.3 TBP PKNOX1 INSM2 FEZF1 KLF7 ZNF362 CEBPB ZEB2 ZNF518A ATF4 KIF27 LOC105376116 RMI1 GC09M083971 C9orf64
GH09F083977 1.1 ENCODE 10.4 -58.6 -58590 5.5 PKNOX1 ARNT CREB3L1 MLX WRNIP1 ARID4B SIN3A DMAP1 YY1 SLC30A9 C9orf64 KIF27 LOC105376116 IDNK RMI1 GKAP1 MIR7-1 ENSG00000235298
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KIF27 on UCSC Golden Path with GeneCards custom track

Promoters for KIF27 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001307032 267 2001 HDGF ARID4B SIN3A ZNF48 YY1 GLIS2 DEK SP3 SP5 NCOA1

Genomic Location for KIF27 Gene

Chromosome:
9
Start:
83,836,698 bp from pter
End:
83,921,467 bp from pter
Size:
84,770 bases
Orientation:
Minus strand

Genomic View for KIF27 Gene

Genes around KIF27 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KIF27 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KIF27 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIF27 Gene

Proteins for KIF27 Gene

  • Protein details for KIF27 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q86VH2-KIF27_HUMAN
    Recommended name:
    Kinesin-like protein KIF27
    Protein Accession:
    Q86VH2
    Secondary Accessions:
    • B2RTR8
    • Q5T6W0
    • Q86VH0
    • Q86VH1
    • Q9UF54

    Protein attributes for KIF27 Gene

    Size:
    1401 amino acids
    Molecular mass:
    160283 Da
    Quaternary structure:
    • Interacts with STK36.
    SequenceCaution:
    • Sequence=CAB63770.1; Type=Frameshift; Positions=728; Evidence={ECO:0000305};

    Alternative splice isoforms for KIF27 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for KIF27 Gene

Post-translational modifications for KIF27 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for KIF27 Gene

Domains & Families for KIF27 Gene

Gene Families for KIF27 Gene

Protein Domains for KIF27 Gene

Suggested Antigen Peptide Sequences for KIF27 Gene

Graphical View of Domain Structure for InterPro Entry

Q86VH2

UniProtKB/Swiss-Prot:

KIF27_HUMAN :
  • Contains 1 kinesin motor domain.
  • Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIF27 subfamily.
Domain:
  • Contains 1 kinesin motor domain.
Family:
  • Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIF27 subfamily.
genes like me logo Genes that share domains with KIF27: view

Function for KIF27 Gene

Molecular function for KIF27 Gene

UniProtKB/Swiss-Prot Function:
Plays an essential role in motile ciliogenesis.

Gene Ontology (GO) - Molecular Function for KIF27 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003777 microtubule motor activity IBA --
GO:0005524 ATP binding IEA --
GO:0008017 microtubule binding IEA --
GO:0016887 ATPase activity IBA --
genes like me logo Genes that share ontologies with KIF27: view
genes like me logo Genes that share phenotypes with KIF27: view

Animal Model Products

  • Taconic Biosciences Mouse Models for KIF27

Inhibitory RNA Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for KIF27 Gene

Localization for KIF27 Gene

Subcellular locations from UniProtKB/Swiss-Prot for KIF27 Gene

Cytoplasm, cytoskeleton. Cell projection, cilium. Note=Localizes to centrioles and basal bodies. {ECO:0000250}.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for KIF27 gene
Compartment Confidence
extracellular 5
cytoskeleton 4
cytosol 3
nucleus 2

Gene Ontology (GO) - Cellular Components for KIF27 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
GO:0005856 cytoskeleton IEA --
GO:0005871 kinesin complex IBA --
GO:0005874 microtubule IEA --
GO:0005929 cilium ISS --
genes like me logo Genes that share ontologies with KIF27: view

Pathways & Interactions for KIF27 Gene

genes like me logo Genes that share pathways with KIF27: view

Gene Ontology (GO) - Biological Process for KIF27 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003351 epithelial cilium movement IEA --
GO:0007018 microtubule-based movement IBA --
GO:0021591 ventricular system development IEA --
GO:0030030 cell projection organization IEA --
GO:0060271 cilium assembly ISS --
genes like me logo Genes that share ontologies with KIF27: view

No data available for SIGNOR curated interactions for KIF27 Gene

Transcripts for KIF27 Gene

Unigene Clusters for KIF27 Gene

Kinesin family member 27:
Representative Sequences:

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for KIF27 Gene

No ASD Table

Relevant External Links for KIF27 Gene

GeneLoc Exon Structure for
KIF27
ECgene alternative splicing isoforms for
KIF27

Expression for KIF27 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KIF27 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for KIF27 Gene

This gene is overexpressed in Testis (x6.5).

Protein differential expression in normal tissues from HIPED for KIF27 Gene

This gene is overexpressed in Bone marrow mesenchymal stem cell (46.3) and Brain (17.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for KIF27 Gene



Protein tissue co-expression partners for KIF27 Gene

NURSA nuclear receptor signaling pathways regulating expression of KIF27 Gene:

KIF27

SOURCE GeneReport for Unigene cluster for KIF27 Gene:

Hs.697514

mRNA Expression by UniProt/SwissProt for KIF27 Gene:

Q86VH2-KIF27_HUMAN
Tissue specificity: Testis, pancreatic islet, germ cell tumors and Jurkat T-cells.
genes like me logo Genes that share expression patterns with KIF27: view

Primer Products

Orthologs for KIF27 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for KIF27 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia KIF27 34 35
  • 99.5 (n)
cow
(Bos Taurus)
Mammalia KIF27 34 35
  • 90.18 (n)
dog
(Canis familiaris)
Mammalia KIF27 34 35
  • 88.83 (n)
mouse
(Mus musculus)
Mammalia Kif27 34 16 35
  • 81.31 (n)
rat
(Rattus norvegicus)
Mammalia Kif27 34
  • 80.66 (n)
oppossum
(Monodelphis domestica)
Mammalia KIF27 35
  • 74 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia KIF27 35
  • 45 (a)
OneToOne
chicken
(Gallus gallus)
Aves KIF27 34 35
  • 68.29 (n)
lizard
(Anolis carolinensis)
Reptilia KIF27 35
  • 62 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia kif27 34
  • 61.04 (n)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes CIN8 35
  • 20 (a)
OneToMany
Species where no ortholog for KIF27 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for KIF27 Gene

ENSEMBL:
Gene Tree for KIF27 (if available)
TreeFam:
Gene Tree for KIF27 (if available)

Paralogs for KIF27 Gene

Variants for KIF27 Gene

Sequence variations from dbSNP and Humsavar for KIF27 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs10115817 -- 83,859,676(+) acagg(C/T)gctca intron-variant
rs10121143 -- 83,898,192(+) agaac(A/G)gaaaa intron-variant
rs10123966 -- 83,879,791(+) CCTGG(C/T)CAAAG intron-variant, downstream-variant-500B
rs10125715 -- 83,913,943(+) AATTT(A/T)AAAAA intron-variant
rs10217422 -- 83,838,575(+) GCACA(C/T)TGGCA intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for KIF27 Gene

Variant ID Type Subtype PubMed ID
nsv982312 CNV duplication 23825009
nsv972767 CNV duplication 23825009
nsv972407 CNV duplication 23825009
nsv8541 CNV gain 18304495
nsv8540 CNV gain 18304495
nsv831644 CNV gain 17160897
nsv6591 CNV insertion 18451855
nsv6590 CNV deletion 18451855
nsv469859 CNV gain 16826518
nsv442559 CNV gain 18776908
nsv438108 CNV loss 16468122
nsv436717 OTHER inversion 17901297
nsv1161879 OTHER complex 26073780
esv3620908 CNV gain 21293372
esv3620907 CNV gain 21293372
esv3620906 CNV gain 21293372
esv3451136 CNV duplication 20981092
esv3393363 CNV duplication 20981092
esv2761538 CNV gain 21179565
esv2759701 CNV gain 17122850
esv2738669 CNV deletion 23290073
esv1179518 CNV insertion 17803354

Variation tolerance for KIF27 Gene

Residual Variation Intolerance Score: 78.9% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 12.12; 93.86% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for KIF27 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KIF27

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for KIF27 Gene

Disorders for KIF27 Gene

Relevant External Links for KIF27

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KIF27

No disorders were found for KIF27 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KIF27 Gene

Publications for KIF27 Gene

  1. Gene discovery in the hamster: a comparative genomics approach for gene annotation by sequencing of hamster testis cDNAs. (PMID: 12783626) Oduru S. … Williams S.C. (BMC Genomics 2003) 3 4 64
  2. Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes. (PMID: 25609649) Li X. … Chen J. (Mol. Syst. Biol. 2015) 3 64
  3. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64
  4. Proteomic analysis of podocyte exosome-enriched fraction from normal human urine. (PMID: 23376485) Prunotto M. … Moll S. (J Proteomics 2013) 3 64
  5. Structural insights into human Kif7, a kinesin involved in Hedgehog signalling. (PMID: 22281744) Klejnot M. … Kozielski F. (Acta Crystallogr. D Biol. Crystallogr. 2012) 3 64

Products for KIF27 Gene

Sources for KIF27 Gene

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