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Aliases for KIAA2022 Gene

Aliases for KIAA2022 Gene

  • KIAA2022 2 3
  • XLMR Protein Related To Neurite Extension 3
  • XLMR-Related Protein, Neurite Extension 3
  • XLMR-Related Protein 2
  • Neurite Extension 2
  • MRX98 3
  • XPN 3

External Ids for KIAA2022 Gene

Previous GeneCards Identifiers for KIAA2022 Gene

  • GC0XM072167
  • GC0XM072820
  • GC0XM073736
  • GC0XM073872
  • GC0XM067587

Summaries for KIAA2022 Gene

Entrez Gene Summary for KIAA2022 Gene

  • An inversion on the X chromosome which disrupts this gene and a G-protein coupled purinergic receptor gene located in the pseudoautosomal region of the X chromosome has been linked to X linked mental retardation.[provided by RefSeq, Mar 2009]

GeneCards Summary for KIAA2022 Gene

KIAA2022 (KIAA2022) is a Protein Coding gene. Diseases associated with KIAA2022 include mental retardation, x-linked 98 and x-linked intellectual disability, cantagrel type. GO annotations related to this gene include DNA-directed DNA polymerase activity and 3-5 exonuclease activity. An important paralog of this gene is REV3L.

UniProtKB/Swiss-Prot for KIAA2022 Gene

  • May be involved in neuronal development.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KIAA2022 Gene

Genomics for KIAA2022 Gene

Regulatory Elements for KIAA2022 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for KIAA2022 Gene

Chromosome:
X
Start:
74,732,849 bp from pter
End:
74,925,485 bp from pter
Size:
192,637 bases
Orientation:
Minus strand

Genomic View for KIAA2022 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KIAA2022 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIAA2022 Gene

Proteins for KIAA2022 Gene

  • Protein details for KIAA2022 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5QGS0-K2022_HUMAN
    Recommended name:
    Protein KIAA2022
    Protein Accession:
    Q5QGS0
    Secondary Accessions:
    • A7YY87
    • Q5JUX9
    • Q8IVE9

    Protein attributes for KIAA2022 Gene

    Size:
    1516 amino acids
    Molecular mass:
    167551 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAC23118.1; Type=Erroneous initiation; Evidence={ECO:0000305};

neXtProt entry for KIAA2022 Gene

Proteomics data for KIAA2022 Gene at MOPED

Post-translational modifications for KIAA2022 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for KIAA2022 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for KIAA2022 Gene

Domains & Families for KIAA2022 Gene

Gene Families for KIAA2022 Gene

Protein Domains for KIAA2022 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KIAA2022: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KIAA2022 Gene

Function for KIAA2022 Gene

Molecular function for KIAA2022 Gene

UniProtKB/Swiss-Prot Function:
May be involved in neuronal development.

Gene Ontology (GO) - Molecular Function for KIAA2022 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003887 DNA-directed DNA polymerase activity IBA --
genes like me logo Genes that share ontologies with KIAA2022: view

Phenotypes for KIAA2022 Gene

genes like me logo Genes that share phenotypes with KIAA2022: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for KIAA2022

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targets and HOMER Transcription for KIAA2022 Gene

Localization for KIAA2022 Gene

Gene Ontology (GO) - Cellular Components for KIAA2022 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016035 zeta DNA polymerase complex IBA --
genes like me logo Genes that share ontologies with KIAA2022: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for KIAA2022 Gene

Pathways & Interactions for KIAA2022 Gene

SuperPathways for KIAA2022 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KIAA2022 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006261 DNA-dependent DNA replication IBA --
GO:0007399 nervous system development IEA --
GO:0042276 error-prone translesion synthesis IBA --
genes like me logo Genes that share ontologies with KIAA2022: view

No data available for Pathways by source and SIGNOR curated interactions for KIAA2022 Gene

Drugs & Compounds for KIAA2022 Gene

No Compound Related Data Available

Transcripts for KIAA2022 Gene

mRNA/cDNA for KIAA2022 Gene

Unigene Clusters for KIAA2022 Gene

KIAA2022:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for KIAA2022

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for KIAA2022 Gene

No ASD Table

Relevant External Links for KIAA2022 Gene

GeneLoc Exon Structure for
KIAA2022
ECgene alternative splicing isoforms for
KIAA2022

Expression for KIAA2022 Gene

mRNA expression in normal human tissues for KIAA2022 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for KIAA2022 Gene

This gene is overexpressed in Cervix (39.8), Bone (15.1), and Lung (14.2).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for KIAA2022 Gene



SOURCE GeneReport for Unigene cluster for KIAA2022 Gene Hs.124128

mRNA Expression by UniProt/SwissProt for KIAA2022 Gene

Q5QGS0-K2022_HUMAN
Tissue specificity: Highly expressed in fetal and adult brain, predominantly in the cerebral cortex and the cerebellum. Also expressed in other tissues but to a lesser extent.
genes like me logo Genes that share expression patterns with KIAA2022: view

Protein tissue co-expression partners for KIAA2022 Gene

- Elite partner

Primer Products

In Situ Assay Products

No data available for mRNA differential expression in normal tissues for KIAA2022 Gene

Orthologs for KIAA2022 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for KIAA2022 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia KIAA2022 35
  • 91.92 (n)
  • 90.82 (a)
KIAA2022 36
  • 91 (a)
OneToOne
dog
(Canis familiaris)
Mammalia KIAA2022 35
  • 91.41 (n)
  • 90.42 (a)
KIAA2022 36
  • 90 (a)
OneToOne
mouse
(Mus musculus)
Mammalia C77370 35
  • 87.75 (n)
  • 85.99 (a)
C77370 16
C77370 36
  • 86 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia KIAA2022 35
  • 97.8 (n)
  • 97.31 (a)
rat
(Rattus norvegicus)
Mammalia RGD1561931 35
  • 87.59 (n)
  • 86.6 (a)
oppossum
(Monodelphis domestica)
Mammalia KIAA2022 36
  • 59 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia KIAA2022 36
  • 61 (a)
OneToOne
chicken
(Gallus gallus)
Aves KIAA2022 35
  • 70.14 (n)
  • 65.44 (a)
KIAA2022 36
  • 62 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia KIAA2022 36
  • 57 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia kiaa2022 35
  • 64 (n)
  • 59.4 (a)
zebrafish
(Danio rerio)
Actinopterygii Dr.15375 35
LOC796115 35
  • 57.04 (n)
  • 49.21 (a)
KIAA2022 36
  • 44 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea Y37B11A.2 36
  • 10 (a)
OneToOne
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes REV3 36
  • 8 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 8 (a)
ManyToMany
Species with no ortholog for KIAA2022:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for KIAA2022 Gene

ENSEMBL:
Gene Tree for KIAA2022 (if available)
TreeFam:
Gene Tree for KIAA2022 (if available)

Paralogs for KIAA2022 Gene

Paralogs for KIAA2022 Gene

genes like me logo Genes that share paralogs with KIAA2022: view

Variants for KIAA2022 Gene

Sequence variations from dbSNP and Humsavar for KIAA2022 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs1157490 -- 74,799,699(-) GAGCC(A/G)TGATC intron-variant
rs1343191 -- 74,846,769(+) GGCAC(A/G)TACCC intron-variant
rs1361828 -- 74,893,519(+) ATTTT(C/G)TGTGC intron-variant
rs1573169 -- 74,907,007(+) TCAGG(G/T)CACCT intron-variant
rs1578812 -- 74,859,002(+) TGATG(C/T)ATGCC intron-variant

Variation tolerance for KIAA2022 Gene

Residual Variation Intolerance Score: 2.07% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.67; 31.86% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for KIAA2022 Gene

HapMap Linkage Disequilibrium report
KIAA2022
Human Gene Mutation Database (HGMD)
KIAA2022

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for KIAA2022 Gene

Disorders for KIAA2022 Gene

MalaCards: The human disease database

(4) MalaCards diseases for KIAA2022 Gene - From: OMIM, ClinVar, GeneTests, Orphanet, DISEASES, and GeneCards

UniProtKB/Swiss-Prot

K2022_HUMAN
  • Mental retardation, X-linked 98 (MRX98) [MIM:300912]: A disorder characterized by significantly below average general intellectual functioning associated with impairments in adaptive behavior and manifested during the developmental period. MRX98 patients show delayed psychomotor development, absent or poor speech development, and postnatal growth retardation, often with microcephaly. Some patients show autistic behavioral features, such as stereotypic hand movements and repetitive behaviors. Additional, more variable features include spasticity, axial hypotonia, seizures, drooling, gastroesophageal reflux, and lack of sphincter control. {ECO:0000269 PubMed:15466006, ECO:0000269 PubMed:23615299}. Note=The disease is caused by mutations affecting the gene represented in this entry. A chromosomal aberration involving KIAA2022 is found in patients with severe mental retardation. Pericentric inversion inv(X)(p22.3;q13.2) with P2RY8 leading to inactivation of KIAA2022 (PubMed:15466006). {ECO:0000269 PubMed:15466006}.

Relevant External Links for KIAA2022

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KIAA2022
genes like me logo Genes that share disorders with KIAA2022: view

No data available for Genatlas for KIAA2022 Gene

Publications for KIAA2022 Gene

  1. Loss of function of KIAA2022 causes mild to severe intellectual disability with an autism spectrum disorder and impairs neurite outgrowth. (PMID: 23615299) Van Maldergem L. … Man H.Y. (Hum. Mol. Genet. 2013) 2 67
  2. Disruption of a new X linked gene highly expressed in brain in a family with two mentally retarded males. (PMID: 15466006) Cantagrel V. … Villard L. (J. Med. Genet. 2004) 2 67
  3. XLMR protein related to neurite extension (Xpn/KIAA2022) regulates cell-cell and cell-matrix adhesion and migration. (PMID: 24071057) Magome T. … Katayama T. (Neurochem. Int. 2013) 67
  4. Transient expression of Xpn, an XLMR protein related to neurite extension, during brain development and participation in neurite outgrowth. (PMID: 22531377) Ishikawa T. … Tohyama M. (Neuroscience 2012) 67
  5. The protein network surrounding the human telomere repeat binding factors TRF1, TRF2, and POT1. (PMID: 20811636) Giannone R.J. … Liu Y. (PLoS ONE 2010) 67

Products for KIAA2022 Gene

Sources for KIAA2022 Gene

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