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Aliases for KIAA1551 Gene

Aliases for KIAA1551 Gene

  • KIAA1551 2 3
  • C12orf35 3 4
  • Chromosome 12 Open Reading Frame 35 2
  • Uncharacterized Protein C12orf35 3
  • Uncharacterized Protein KIAA1551 3
  • UTA2-1 3

External Ids for KIAA1551 Gene

Previous HGNC Symbols for KIAA1551 Gene

  • C12orf35

Previous GeneCards Identifiers for KIAA1551 Gene

  • GC12P032113

Summaries for KIAA1551 Gene

GeneCards Summary for KIAA1551 Gene

KIAA1551 (KIAA1551) is a Protein Coding gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KIAA1551 Gene

Genomics for KIAA1551 Gene

Regulatory Elements for KIAA1551 Gene

Enhancers for KIAA1551 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G031905 1.4 FANTOM5 ENCODE dbSUPER 28.3 -52.8 -52801 2.1 SOX13 CTCF CBX3 ARID4B CEBPG ZNF384 EBF1 RAD21 CHAMP1 TEAD3 KIAA1551 AMN1 LINC02422 H3F3C RPLP2P4 GC12M031929
GH12G031745 2.1 FANTOM5 Ensembl ENCODE dbSUPER 17.7 -210.0 -210039 6.9 MLX CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 SP3 NFYC KIAA1551 H3F3C DSPA2D LOC100420981 DDX11-AS1 AMN1 ENSG00000256843
GH12G032050 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.4 +93.4 93438 3.7 PKNOX1 FOXA2 ATF1 ARNT ZNF2 TCF12 GATA2 FOS CAVIN1 JUNB KIAA1551 H3F3C AMN1 ETFBKMT ENSG00000257852 ENSG00000257094
GH12G031714 1.8 VISTA Ensembl ENCODE dbSUPER 10 -243.7 -243669 3.0 HDGF PKNOX1 FOXA2 ARNT YY1 ZNF766 CBX5 ZNF207 FOS ZHX2 H3F3C FLJ13224 KIAA1551 FAM60A GC12P031714 STMN1P1
GH12G031874 1.5 Ensembl ENCODE dbSUPER 11.4 -82.7 -82664 5.1 HDGF ATF1 PKNOX1 CREB3L1 ARNT TCF12 ZNF766 GATA2 CBX5 FOS ENSG00000252204 KIAA1551 LINC02422 ENSG00000256372
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KIAA1551 on UCSC Golden Path with GeneCards custom track

Promoters for KIAA1551 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000050633 430 2801 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 CBX5 ZNF207

Genomic Location for KIAA1551 Gene

Chromosome:
12
Start:
31,959,370 bp from pter
End:
31,993,107 bp from pter
Size:
33,738 bases
Orientation:
Plus strand

Genomic View for KIAA1551 Gene

Genes around KIAA1551 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KIAA1551 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KIAA1551 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIAA1551 Gene

Proteins for KIAA1551 Gene

  • Protein details for KIAA1551 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9HCM1-K1551_HUMAN
    Recommended name:
    Uncharacterized protein KIAA1551
    Protein Accession:
    Q9HCM1
    Secondary Accessions:
    • B2RTU5
    • Q4KN17
    • Q9NVL6
    • Q9NWP9

    Protein attributes for KIAA1551 Gene

    Size:
    1747 amino acids
    Molecular mass:
    194857 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAA91330.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305}; Sequence=BAA91734.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=BAB13377.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Sequence of unknown origin in the C-terminal part.; Evidence={ECO:0000305};

neXtProt entry for KIAA1551 Gene

Post-translational modifications for KIAA1551 Gene

  • Ubiquitination at isoforms=8, posLast=204204, isoforms=233, posLast=275275, posLast=299299, isoforms=341, posLast=390390, isoforms=398, posLast=404404, posLast=442442, isoforms=450, isoforms=576, isoforms=658, posLast=772772, isoforms=777, isoforms=793, and isoforms=815
  • Modification sites at PhosphoSitePlus

Other Protein References for KIAA1551 Gene

No data available for DME Specific Peptides for KIAA1551 Gene

Domains & Families for KIAA1551 Gene

Gene Families for KIAA1551 Gene

Protein Domains for KIAA1551 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KIAA1551: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KIAA1551 Gene

Function for KIAA1551 Gene

Phenotypes for KIAA1551 Gene

genes like me logo Genes that share phenotypes with KIAA1551: view

Animal Model Products

CRISPR Products

miRNA for KIAA1551 Gene

miRTarBase miRNAs that target KIAA1551

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for KIAA1551 Gene

Localization for KIAA1551 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for KIAA1551 gene
Compartment Confidence
nucleus 4
cytosol 3
cytoskeleton 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for KIAA1551 Gene

Pathways & Interactions for KIAA1551 Gene

SuperPathways for KIAA1551 Gene

No Data Available

Interacting Proteins for KIAA1551 Gene

STRING Interaction Network Preview (showing 2 interactants - click image to see details)
http://version10.5.string-db.org/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000310338%0d%0a9606.ENSP00000417281%0d%0a9606.ENSP00000326514%0d%0a
Selected Interacting proteins: Q9HCM1-K1551_HUMAN ENSP00000310338 for KIAA1551 Gene via IID STRING

Gene Ontology (GO) - Biological Process for KIAA1551 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KIAA1551 Gene

Drugs & Compounds for KIAA1551 Gene

No Compound Related Data Available

Transcripts for KIAA1551 Gene

Unigene Clusters for KIAA1551 Gene

KIAA1551:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KIAA1551 Gene

No ASD Table

Relevant External Links for KIAA1551 Gene

GeneLoc Exon Structure for
KIAA1551
ECgene alternative splicing isoforms for
KIAA1551

Expression for KIAA1551 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KIAA1551 Gene

mRNA differential expression in normal tissues according to GTEx for KIAA1551 Gene

This gene is overexpressed in Whole Blood (x8.0).

Protein differential expression in normal tissues from HIPED for KIAA1551 Gene

This gene is overexpressed in Plasma (58.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for KIAA1551 Gene



Protein tissue co-expression partners for KIAA1551 Gene

NURSA nuclear receptor signaling pathways regulating expression of KIAA1551 Gene:

KIAA1551

SOURCE GeneReport for Unigene cluster for KIAA1551 Gene:

Hs.445129

Evidence on tissue expression from TISSUES for KIAA1551 Gene

  • Spleen(2.1)
genes like me logo Genes that share expression patterns with KIAA1551: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for KIAA1551 Gene

Orthologs for KIAA1551 Gene

This gene was present in the common ancestor of chordates.

Orthologs for KIAA1551 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia KIAA1551 34 35
  • 99.26 (n)
cow
(Bos Taurus)
Mammalia C5H12orf35 34
  • 78.33 (n)
KIAA1551 35
  • 62 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C27H12orf35 34
  • 78.2 (n)
KIAA1551 35
  • 63 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 2810474O19Rik 34 16 35
  • 70.52 (n)
rat
(Rattus norvegicus)
Mammalia RGD1309621 34
  • 69.74 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia KIAA1551 35
  • 44 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia KIAA1551 35
  • 31 (a)
OneToOne
chicken
(Gallus gallus)
Aves KIAA1551 35
  • 19 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia KIAA1551 35
  • 17 (a)
OneToOne
Species where no ortholog for KIAA1551 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for KIAA1551 Gene

ENSEMBL:
Gene Tree for KIAA1551 (if available)
TreeFam:
Gene Tree for KIAA1551 (if available)

Paralogs for KIAA1551 Gene

Pseudogenes.org Pseudogenes for KIAA1551 Gene

genes like me logo Genes that share paralogs with KIAA1551: view

No data available for Paralogs for KIAA1551 Gene

Variants for KIAA1551 Gene

Sequence variations from dbSNP and Humsavar for KIAA1551 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1000130362 -- 31,979,275(+) ATTCT(A/C)TCCAC intron-variant
rs1000292032 -- 31,983,883(+) TCAGA(A/G)CCACC reference, synonymous-codon
rs1000314442 -- 31,978,416(+) ATCTC(C/T)AGTAA intron-variant
rs1000350362 -- 31,978,125(+) TGGCA(C/T)CTTTA intron-variant
rs1000503934 -- 31,979,126(+) TGTGT(C/T)AGCCA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for KIAA1551 Gene

Variant ID Type Subtype PubMed ID
nsv558100 CNV gain 21841781

Variation tolerance for KIAA1551 Gene

Residual Variation Intolerance Score: 98.9% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 11.40; 92.75% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for KIAA1551 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KIAA1551

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for KIAA1551 Gene

Disorders for KIAA1551 Gene

Relevant External Links for KIAA1551

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KIAA1551

No disorders were found for KIAA1551 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KIAA1551 Gene

Publications for KIAA1551 Gene

  1. Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10997877) Nagase T. … Ohara O. (DNA Res. 2000) 2 3 4 64
  2. Towards effective and safe immunotherapy after allogeneic stem cell transplantation: identification of hematopoietic-specific minor histocompatibility antigen UTA2-1. (PMID: 23079962) Oostvogels R. … Mutis T. (Leukemia 2013) 2 3 64
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  4. The variant Polycomb Repressor Complex 1 component PCGF1 interacts with a pluripotency sub-network that includes DPPA4, a regulator of embryogenesis. (PMID: 26687479) Oliviero G. … Cagney G. (Sci. Rep. 2015) 3 64
  5. An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome. (PMID: 24275569) Bian Y. … Zou H. (J. Proteomics 2014) 4 64

Products for KIAA1551 Gene

Sources for KIAA1551 Gene

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