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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

KIAA1324L Gene

protein-coding   GIFtS: 48
GCID: GC07M086506

KIAA1324-Like

  Search for KIAA1324L
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA

Quality score for the ORGUL clustered with this gene is 3

Aliases
KIAA1324-like1 2
EIG121-like1 2
Estrogen-Induced Gene 121-Like Protein2 3
EIG121L2 3
UPF0577 Protein KIAA1324-Like2
hEIG121L3

External Ids:    HGNC: 219451   Entrez Gene: 2222232   Ensembl: ENSG000001646597   OMIM: 6140485   UniProtKB: A8MWY03   
ORGUL members:         
NONCODE14:n408882      

Export aliases for KIAA1324L gene to outside databases

Previous GC identifers: GC07M086154 GC07M086347 GC07M081117


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

GeneCards Summary for KIAA1324L Gene: 
KIAA1324L (KIAA1324-like) is a protein-coding gene, and is affiliated with the lncRNA class. An important paralog of this gene is KIAA1324.


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 73), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000007.13  NC_018918.2  NT_007933.15  NT_079595.2  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the KIAA1324L gene promoter:
         FOXO3   POU6F1 (c2)   CUTL1   Cdc5   C/EBPalpha   Evi-1   FOXO3b   Cart-1   FOXO3a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 3): KIAA1324L promoter sequence
   Search SABiosciences Chromatin IP Primers for KIAA1324L

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat KIAA1324L


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 7q21.12   Ensembl cytogenetic band:  7q21.12   HGNC cytogenetic band: 7q21.12

KIAA1324L Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
KIAA1324L gene location

GeneLoc information about chromosome 7         GeneLoc Exon Structure

GeneLoc location for GC07M086506:  view genomic region     (about GC identifiers)

Start:
86,506,222 bp from pter      End:
86,689,015 bp from pter
Size:
182,794 bases      Orientation:
minus strand

1 alternative location:
Chr7-,CRA_TCAG 85,837,967-86,020,533     

(According to UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MAXQB RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Ontologies according to Gene Ontology Consortium 01 Oct 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, and/or Cloud-Clone Corp.)
About This Section

UniProtKB/Swiss-Prot: K132L_HUMAN, A8MWY0 (See protein sequence)
Recommended Name: UPF0577 protein KIAA1324-like precursor  
Size: 1029 amino acids; 113842 Da
Subcellular location: Membrane; Single-pass type I membrane protein (Potential)
Sequence caution: Sequence=AAI17310.1; Type=Erroneous initiation; Sequence=BAB71041.1; Type=Frameshift;
Positions=719;
Secondary accessions: A4D1C9 B4DJV3 Q17RI6 Q96DP2
Alternative splicing: 3 isoforms:  A8MWY0-1   A8MWY0-2   A8MWY0-3   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for KIAA1324L: NX_A8MWY0

Explore proteomics data for KIAA1324L at MOPED 

Post-translational modifications:

  • View modification sites using PhosphoSitePlus
  • View neXtProt modification sites for NX_A8MWY0

  • KIAA1324L Protein expression data from MOPED1, PaxDb2 and MAXQB3 :    About this image 

    KIAA1324L Protein Expression
    REFSEQ proteins (2 alternative transcripts): 
    NP_001136221.1  NP_689961.3  

    ENSEMBL proteins: 
     ENSP00000413445   ENSP00000397377   ENSP00000378203   ENSP00000402390   ENSP00000406961  
     ENSP00000387496   ENSP00000381325   ENSP00000410045   ENSP00000297222  

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    Browse Sino Biological Cell Lysates 
    Browse ProSpec Recombinant Proteins
    Browse Proteins at Cloud-Clone Corp. 

    Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0016021integral to membrane IEA--

    KIAA1324L for ontologies           About GeneDecksing



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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    2 InterPro protein domains:
     IPR009011 Man6P_isomerase_rcpt-bd_dom
     IPR009030 Growth_fac_rcpt_N_dom

    Graphical View of Domain Structure for InterPro Entry A8MWY0

    ProtoNet protein and cluster: A8MWY0

    UniProtKB/Swiss-Prot: K132L_HUMAN, A8MWY0
    Similarity: Belongs to the UPF0577 family


    KIAA1324L for domains           About GeneDecksing


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, Vector BioLabs, and Sirion Biotech, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene.)
    About This Section

    Phenotypes:
         1 GenomeRNAi human phenotype for KIAA1324L:
     Increased cell number in G1, s 

    Animal Models:
       inGenious Targeting Laboratory - Custom generated mouse model solutions for KIAA1324L 
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       genOway customized KO model: permanent, tissue-specific or time-controlled inactivation for KIAA1324L 
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    SwitchGear 3'UTR luciferase reporter plasmidKIAA1324L 3' UTR sequence
    Inhib. RNA
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    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene).
    About This Section



    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for KIAA1324L

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for KIAA1324L (K132L)

    Search CenterWatch for drugs/clinical trials and news about KIAA1324L / K132L

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Sirion Biotech, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for KIAA1324L gene (2 alternative transcripts): 
    NM_001142749.2  NM_152748.3  

    Unigene Cluster for KIAA1324L:

    KIAA1324-like
    Hs.208093  [show with all ESTs]
    Unigene Representative Sequence: NM_001142749
    13 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000450689(uc003uie.3 uc011kgz.2 uc003uif.2 uc011kha.2)
    ENST00000444627 ENST00000394714 ENST00000416314 ENST00000480216 ENST00000423294
    ENST00000427812 ENST00000470853 ENST00000490995 ENST00000474609 ENST00000398276
    ENST00000425689 ENST00000297222
    miRNA
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    hsa-miR-607 hsa-miR-3607-3p hsa-miR-605 hsa-miR-3161 hsa-miR-489 hsa-miR-3148 hsa-miR-761 hsa-miR-4324
    SwitchGear 3'UTR luciferase reporter plasmidKIAA1324L 3' UTR sequence
    Inhib. RNA
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    Additional mRNA sequence: 

    AK055902.1 AK296250.1 AK303619.1 BC117309.1 NR_030672.1 

    17 DOTS entries:

    DT.210695  DT.100735528  DT.100781795  DT.102843238  DT.307292  DT.40108629  DT.121051501  DT.102843244 
    DT.121051506  DT.121051446  DT.121051452  DT.75197377  DT.91671727  DT.92014153  DT.102843245  DT.121051382 
    DT.121051387 

    24/60 AceView cDNA sequences (see all 60):

    AA305780 BQ182610 NM_152748 BM783507 AA010992 CD655511 CD676972 AA927017 
    AW665873 AI885785 CA407428 BM759885 BM752466 CB120618 CA448279 CB241751 
    AI797353 AI830505 AK055902 BU687296 BP352155 BM723980 BF740039 BX498549 

    GeneLoc Exon Structure

    5 Alternative Splicing Database (ASD) splice patterns (SP) for KIAA1324L    About this scheme

    ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13a · 13b · 13c ^ 14a · 14b ^ 15 ^ 16 ^ 17 ^ 18a · 18b ^ 19 ^ 20 ^ 21 ^ 22
    SP1:                                            -     -                                                     -                                                   
    SP2:                                                  -                                                                                                         
    SP3:                                                                                                                                                            
    SP4:                                                                                                                                                            
    SP5:        -                                                                                                                                                   


    ECgene alternative splicing isoforms for KIAA1324L

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    KIAA1324L expression in normal human tissues (normalized intensities)      KIAA1324L embryonic expression: see
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: TGAGCATATG
    KIAA1324L Expression
    About this image


    KIAA1324L expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database 
     5/8 selected tissues (see all 8) fully expand
     
     Endothelium (Cardiovascular System)    fully expand to see all 7 entries
             Human corneal endothelial cells
             Human Intestinal Microvascular Endothelial Cells (HIMEC)   
     
     Umbilical Cord (Extraembryonic Tissues)    fully expand to see all 3 entries
             Human umbilical Smooth Muscle (HUSM)   
     
     Lymph (Cardiovascular System)    fully expand to see all 2 entries
             Human Dermal Lymphatic Endothelial Cells (HDLEC)   
     
     Dermis (Hematopoietic System)    fully expand to see all 2 entries
             Human Dermal Microvascular Endothelial Cells (HDMEC)   
     
     Smooth Muscle (Extraembryonic Tissues)
             Human umbilical Smooth Muscle (HUSM)   

    See KIAA1324L Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for KIAA1324L

    SOURCE GeneReport for Unigene cluster: Hs.208093
        SABiosciences Custom PCR Arrays for KIAA1324L
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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for KIAA1324L gene from 6/15 species (see all 15)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia 9330182L06Rik1 , 5 RIKEN cDNA 9330182L06 gene1, 5 89.36(n)1
    93.48(a)1
      5 (3.69 cM)5
    2310141  NM_172706.31  NP_766294.21 
     92661185 
    chicken
    (Gallus gallus)
    Aves KIAA1324L1 KIAA1324-like 77.73(n)
    83.56(a)
      418645  XM_416843.3  XP_416843.3 
    lizard
    (Anolis carolinensis)
    Reptilia KIAA1324L6
    Uncharacterized protein
    77(a)
    1 ↔ 1
    5(89746388-89863823)
    African clawed frog
    (Xenopus laevis)
    Amphibia BX844402.12   -- 75.53(n)    BX844402.1 
    zebrafish
    (Danio rerio)
    Actinopterygii AI878084.12   -- 72.85(n)   325168  AI878084.1 
    worm
    (Caenorhabditis elegans)
    Secernentea CELE_Y73F8A.51 Protein Y73F8A.5 44.57(n)
    33.81(a)
      178425  NM_070440.4  NP_502841.1 


    ENSEMBL Gene Tree for KIAA1324L (if available)
    TreeFam Gene Tree for KIAA1324L (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for KIAA1324L gene
    KIAA13242  
    1 SIMAP similar gene for KIAA1324L using alignment to 7 protein entries:     K132L_HUMAN (see all proteins):
    KIAA1324

    KIAA1324L for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/3290 SNPs in KIAA1324L are shown (see all 3290)    About this table     
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 7 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs593806851,2
    C--81131756(+) ATGAA-/TGTA  
            
    ATATC
    3 -- int10--------
    rs1880383301,2
    --86505786(+) TACCAA/GTGAAT 3 -- int10--------
    rs1923631521,2
    --86506006(+) CTAAAA/GGGAAA 3 -- int10--------
    rs102399391,2
    H--86506134(+) aagacC/Ttgaga 3 -- int14Minor allele frequency- T:0.00NS EA 418
    rs1416956821,2
    C--86506157(+) TTTAC-/ATTTTT 3 -- int10--------
    rs774795941,2
    C--86506422(+) GTAATA/CATAAT 3 -- ut31 nc-transcript-variant0--------
    rs77817821,2
    C,F,A,H--86506594(+) TATGAA/GGATGA 3 -- ut31 nc-transcript-variant19Minor allele frequency- G:0.08NS EA NA WA 2110
    rs1826175521,2
    --86506619(+) TCCAAC/TGAATG 3 -- ut31 nc-transcript-variant0--------
    rs1888686251,2
    --86506665(+) TAAGGA/GCATTT 3 -- ut31 nc-transcript-variant0--------
    rs1923640221,2
    --86506666(+) AAGGAA/CATTTT 3 -- ut31 nc-transcript-variant0--------

    HapMap Linkage Disequilibrium report for KIAA1324L (86506222 - 86689015 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 10/12 variations for KIAA1324L (see all 12):    About this table     
    Variant IDTypeSubtypePubMed ID
    esv2674083CNV Deletion23128226
    esv2734771CNV Deletion23290073
    esv1677921CNV Deletion17803354
    esv998639CNV Deletion20482838
    nsv5825CNV Insertion18451855
    esv270310CNV Insertion20981092
    nsv824202CNV Loss20364138
    nsv527889CNV Gain19592680
    nsv8171CNV Gain18304495
    nsv483124CNV Gain15286789

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    KIAA1324L for disorders           About MalaCards
    OMIM gene information: 614048    OMIM disorders: --


    KIAA1324L for disorders           About GeneDecksing

    Genetic Association Database (GAD): KIAA1324L

    Export disorders for KIAA1324L gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for KIAA1324L gene integrated from 9 sources:
    (articles sorted by number of sources associating them with KIAA1324L)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Expression of estrogen induced gene 121-like (EIG121L) during early Xenopus development. (PubMed id 17475571)1, 2 Araki T.... Nishida E. (2007)
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    3. Human chromosome 7: DNA sequence and biology. (PubMed id 12690205)1, 2 Scherer S.W.... Tsui L.-C. (2003)
    4. Genome-wide association study to identify common varia nts associated with brachial circumference: a meta-analysis of 14 cohorts. (PubMed id 22479309)4 Boraska V....Zeggini E. (2012)
    5. A transmembrane protein EIG121L is required for epide rmal differentiation during early embryonic development. (PubMed id 21177533)1 Araki T....Nishida E. (2011)
    6. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560)1 Kimura K.... Sugano S. (2006)
    7. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)2 Gerhard D.S....Malek J. (2004)
    8. The DNA sequence of human chromosome 7. (PubMed id 12853948)2 Hillier L.W.... Wilson R.K. (2003)
    9. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
    10. Normalization and subtraction: two approaches to facilitate gene discovery. (PubMed id 8889548)1 Bonaldo M.F.... Soares M.B. (1996)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
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    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 222223 HGNC: 21945 AceView: FLJ31340 Ensembl:ENSG00000164659 euGenes: HUgn222223
    ECgene: KIAA1324L H-InvDB: KIAA1324L

    (According to HUGE)
    About This Section
    HUGE: KIAA1324L

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for KIAA1324L Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for KIAA1324L gene:
    Search GeneIP for patents involving KIAA1324L

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    GeneCards Homepage - Last full update: 23 Oct 2013 - Incrementals: 3 Nov 2013 , 7 Nov 2013 , 23 Jan 2014

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