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Aliases for KIAA1147 Gene

Aliases for KIAA1147 Gene

  • KIAA1147 2 3
  • LCHN 3 4
  • Predicted Protein Of HQ2561 3
  • Protein LCHN 3
  • PRO2561 3

External Ids for KIAA1147 Gene

Previous GeneCards Identifiers for KIAA1147 Gene

  • GC07M141003
  • GC07M141356
  • GC07M135653

Summaries for KIAA1147 Gene

GeneCards Summary for KIAA1147 Gene

KIAA1147 (KIAA1147) is a Protein Coding gene.

UniProtKB/Swiss-Prot for KIAA1147 Gene

  • May play a role in neuritogenesis, as well as in neuronal recovery and/or restructuring in the hippocampus following transient cerebral ischemia.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KIAA1147 Gene

Genomics for KIAA1147 Gene

Regulatory Elements for KIAA1147 Gene

Genomic Location for KIAA1147 Gene

141,652,381 bp from pter
141,702,153 bp from pter
49,773 bases
Minus strand

Genomic View for KIAA1147 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KIAA1147 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIAA1147 Gene

Proteins for KIAA1147 Gene

  • Protein details for KIAA1147 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Protein LCHN
    Protein Accession:
    Secondary Accessions:
    • Q9ULS3

    Protein attributes for KIAA1147 Gene

    455 amino acids
    Molecular mass:
    51446 Da
    Quaternary structure:
    No Data Available

neXtProt entry for KIAA1147 Gene

Proteomics data for KIAA1147 Gene at MOPED

Post-translational modifications for KIAA1147 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for KIAA1147 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for KIAA1147 Gene

Domains for KIAA1147 Gene

Protein Domains for KIAA1147 Gene


Suggested Antigen Peptide Sequences for KIAA1147 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the LCHN family.
  • Belongs to the LCHN family.
genes like me logo Genes that share domains with KIAA1147: view

No data available for Gene Families for KIAA1147 Gene

Function for KIAA1147 Gene

Molecular function for KIAA1147 Gene

UniProtKB/Swiss-Prot Function:
May play a role in neuritogenesis, as well as in neuronal recovery and/or restructuring in the hippocampus following transient cerebral ischemia.

Animal Model Products

CRISPR Products

miRNA for KIAA1147 Gene

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for KIAA1147

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for KIAA1147 Gene

Localization for KIAA1147 Gene

Subcellular locations from

Jensen Localization Image for KIAA1147 Gene COMPARTMENTS Subcellular localization image for KIAA1147 gene
Compartment Confidence
cytosol 2
endoplasmic reticulum 1
mitochondrion 1
nucleus 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for KIAA1147 Gene

Pathways for KIAA1147 Gene

SuperPathways for KIAA1147 Gene

No Data Available

Interacting Proteins for KIAA1147 Gene

Gene Ontology (GO) - Biological Process for KIAA1147 Gene


No data available for Pathways by source for KIAA1147 Gene

Transcripts for KIAA1147 Gene

mRNA/cDNA for KIAA1147 Gene

(3) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KIAA1147 Gene

Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for KIAA1147

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for KIAA1147 Gene

No ASD Table

Relevant External Links for KIAA1147 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for KIAA1147 Gene

mRNA expression in normal human tissues for KIAA1147 Gene

Protein differential expression in normal tissues for KIAA1147 Gene

This gene is overexpressed in Peripheral blood mononuclear cells (19.5), Bone (12.7), Fetal Brain (11.9), Frontal cortex (11.5), and Blymphocyte (8.6).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for KIAA1147 Gene

SOURCE GeneReport for Unigene cluster for KIAA1147 Gene Hs.521240

genes like me logo Genes that share expressions with KIAA1147: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Expression partners for KIAA1147 Gene

Orthologs for KIAA1147 Gene

This gene was present in the common ancestor of chordates.

Orthologs for KIAA1147 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia KIAA1147 35
  • 91.53 (n)
  • 98.09 (a)
KIAA1147 36
  • 98 (a)
(Canis familiaris)
Mammalia KIAA1147 35
  • 92.12 (n)
  • 98.9 (a)
KIAA1147 36
  • 87 (a)
(Mus musculus)
Mammalia E330009J07Rik 35
  • 89.94 (n)
  • 95.91 (a)
E330009J07Rik 16
E330009J07Rik 36
  • 96 (a)
(Pan troglodytes)
Mammalia KIAA1147 35
  • 99.85 (n)
  • 100 (a)
KIAA1147 36
  • 100 (a)
(Rattus norvegicus)
Mammalia RGD1563986 35
  • 89.89 (n)
  • 96.48 (a)
(Monodelphis domestica)
Mammalia KIAA1147 36
  • 85 (a)
(Ornithorhynchus anatinus)
Mammalia KIAA1147 36
  • 85 (a)
(Gallus gallus)
Aves KIAA1147 35
  • 80.33 (n)
  • 90.44 (a)
KIAA1147 36
  • 90 (a)
(Anolis carolinensis)
Reptilia KIAA1147 36
  • 84 (a)
(Danio rerio)
Actinopterygii si:ch211-238n5.4 35
si:ch211-238n5.4 36
  • 65 (a)
Species with no ortholog for KIAA1147:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for KIAA1147 Gene

Gene Tree for KIAA1147 (if available)
Gene Tree for KIAA1147 (if available)

Paralogs for KIAA1147 Gene

(1) SIMAP similar genes for KIAA1147 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with KIAA1147: view

No data available for Paralogs for KIAA1147 Gene

Variants for KIAA1147 Gene

Sequence variations from dbSNP and Humsavar for KIAA1147 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs1045119 -- 141,661,192(-) TAGCC(A/G)TCAGT utr-variant-3-prime, nc-transcript-variant
rs1859570 -- 141,656,384(+) ATATA(C/T)CAAGT downstream-variant-500B, intron-variant
rs2269984 -- 141,662,893(+) GGGGG(A/T)ATAAA intron-variant
rs2286150 -- 141,664,912(+) TGCTC(A/G)TTGAG reference, synonymous-codon, nc-transcript-variant
rs2286151 -- 141,665,328(+) GGGGA(C/T)AGAGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for KIAA1147 Gene

Variant ID Type Subtype PubMed ID
esv34135 CNV Loss 18971310
nsv5973 CNV Insertion 18451855

Relevant External Links for KIAA1147 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for KIAA1147 Gene

Disorders for KIAA1147 Gene

No disorders were found for KIAA1147 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for KIAA1147 Gene

Publications for KIAA1147 Gene

  1. Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain. (PMID: 10574461) Hirosawa M. … Ohara O. (DNA Res. 1999) 3 4
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 3
  4. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. (PMID: 21890473) Wagner S.A. … Choudhary C. (Mol. Cell Proteomics 2011) 3
  5. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3

Products for KIAA1147 Gene

Sources for KIAA1147 Gene

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