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Aliases for KIAA1143 Gene

Aliases for KIAA1143 Gene

  • KIAA1143 2 3

External Ids for KIAA1143 Gene

Summaries for KIAA1143 Gene

GeneCards Summary for KIAA1143 Gene

KIAA1143 (KIAA1143) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KIAA1143 Gene

Genomics for KIAA1143 Gene

Genomic Location for KIAA1143 Gene

Start:
44,737,661 bp from pter
End:
44,761,681 bp from pter
Size:
24,021 bases
Orientation:
Minus strand

Genomic View for KIAA1143 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KIAA1143 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIAA1143 Gene

Regulatory Elements for KIAA1143 Gene

Proteins for KIAA1143 Gene

  • Protein details for KIAA1143 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96AT1-K1143_HUMAN
    Recommended name:
    Uncharacterized protein KIAA1143
    Protein Accession:
    Q96AT1
    Secondary Accessions:
    • A8K0I4
    • Q96HJ8
    • Q9ULS7

    Protein attributes for KIAA1143 Gene

    Size:
    154 amino acids
    Molecular mass:
    17465 Da
    Quaternary structure:
    No Data Available

neXtProt entry for KIAA1143 Gene

Proteomics data for KIAA1143 Gene at MOPED

Post-translational modifications for KIAA1143 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for KIAA1143 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for KIAA1143 Gene

Domains for KIAA1143 Gene

Protein Domains for KIAA1143 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with KIAA1143: view

No data available for Gene Families and UniProtKB/Swiss-Prot for KIAA1143 Gene

Function for KIAA1143 Gene

Gene Ontology (GO) - Molecular Function for KIAA1143 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 21516116
genes like me logo Genes that share ontologies with KIAA1143: view

Phenotypes for KIAA1143 Gene

GenomeRNAi human phenotypes for KIAA1143:
genes like me logo Genes that share phenotypes with KIAA1143: view

miRNA for KIAA1143 Gene

miRTarBase miRNAs that target KIAA1143

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for KIAA1143 Gene

Localization for KIAA1143 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for KIAA1143 Gene COMPARTMENTS Subcellular localization image for KIAA1143 gene
Compartment Confidence
nucleus 3
mitochondrion 1

No data available for Gene Ontology (GO) - Cellular Components for KIAA1143 Gene

Pathways for KIAA1143 Gene

SuperPathways for KIAA1143 Gene

No Data Available

Interacting Proteins for KIAA1143 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000296121%0d%0a9606.ENSP00000262127%0d%0a
Selected Interacting proteins: ENSP00000296121 Q96AT1-K1143_HUMAN for KIAA1143 Gene via STRING UniProtKB I2D

Gene Ontology (GO) - Biological Process for KIAA1143 Gene

None

No data available for Pathways by source for KIAA1143 Gene

Transcripts for KIAA1143 Gene

mRNA/cDNA for KIAA1143 Gene

Unigene Clusters for KIAA1143 Gene

KIAA1143:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KIAA1143 Gene

No ASD Table

Relevant External Links for KIAA1143 Gene

GeneLoc Exon Structure for
KIAA1143
ECgene alternative splicing isoforms for
KIAA1143

Expression for KIAA1143 Gene

mRNA expression in normal human tissues for KIAA1143 Gene

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for KIAA1143 Gene

SOURCE GeneReport for Unigene cluster for KIAA1143 Gene Hs.744955

genes like me logo Genes that share expressions with KIAA1143: view

Orthologs for KIAA1143 Gene

This gene was present in the common ancestor of animals.

Orthologs for KIAA1143 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia KIAA1143 37
  • 100 (a)
OneToOne
LOC739627 36
  • 99.78 (n)
  • 100 (a)
cow
(Bos Taurus)
Mammalia KIAA1143 36
  • 91.77 (n)
  • 90.26 (a)
KIAA1143 37
  • 88 (a)
OneToOne
dog
(Canis familiaris)
Mammalia KIAA1143 36
  • 91.23 (n)
  • 91.45 (a)
KIAA1143 37
  • 80 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 1110059G10Rik 36
  • 88.1 (n)
  • 88.31 (a)
1110059G10Rik 16
1110059G10Rik 37
  • 87 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia KIAA1143 37
  • 71 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia KIAA1143 37
  • 61 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1311745 36
  • 86.8 (n)
  • 87.66 (a)
chicken
(Gallus gallus)
Aves KIAA1143 36
  • 62.12 (n)
  • 59.09 (a)
KIAA1143 37
  • 58 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia KIAA1143 37
  • 64 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.7340 36
tropical clawed frog
(Silurana tropicalis)
Amphibia kiaa1143 36
  • 65.8 (n)
  • 60.13 (a)
Str.3626 36
zebrafish
(Danio rerio)
Actinopterygii wufa20b03 36
zgc:77056 36
  • 63.51 (n)
  • 59.46 (a)
zgc:77056 37
  • 56 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG42245 36
  • 53.19 (n)
  • 46.81 (a)
CG42245 37
  • 43 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea CSA.1575 37
  • 35 (a)
OneToOne
Species with no ortholog for KIAA1143:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for KIAA1143 Gene

ENSEMBL:
Gene Tree for KIAA1143 (if available)
TreeFam:
Gene Tree for KIAA1143 (if available)

Paralogs for KIAA1143 Gene

Pseudogenes.org Pseudogenes for KIAA1143 Gene

genes like me logo Genes that share paralogs with KIAA1143: view

No data available for Paralogs for KIAA1143 Gene

Variants for KIAA1143 Gene

Sequence variations from dbSNP and Humsavar for KIAA1143 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs3762 -- 44,748,956(+) CTTCT(A/G)TAACA utr-variant-3-prime
rs1058705 -- 44,748,810(-) TCACC(A/C)CTGTA utr-variant-3-prime
rs1141633 -- 44,749,914(-) TGCTC(A/G)GGAGG utr-variant-3-prime
rs1141637 -- 44,749,387(-) TTTTG(A/G)GACAG utr-variant-3-prime
rs3205460 -- 44,750,061(-) ttgta(A/G)tccca utr-variant-3-prime

Relevant External Links for KIAA1143 Gene

HapMap Linkage Disequilibrium report
KIAA1143

No data available for Structural Variations from Database of Genomic Variants (DGV) for KIAA1143 Gene

Disorders for KIAA1143 Gene

No disorders were found for KIAA1143 Gene.

No data available for UniProtKB/Swiss-Prot for KIAA1143 Gene

Publications for KIAA1143 Gene

  1. Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain. (PMID: 10574461) Hirosawa M. … Ohara O. (DNA Res. 1999) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PMID: 17081983) Olsen J.V. … Mann M. (Cell 2006) 3
  5. Next-generation sequencing to generate interactome datasets. (PMID: 21516116) Yu H. … Vidal M. (Nat. Methods 2011) 3

Products for KIAA1143 Gene

Sources for KIAA1143 Gene

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