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Aliases for KIAA0930 Gene

Aliases for KIAA0930 Gene

  • KIAA0930 2 3
  • C22orf9 3 4
  • Chromosome 22 Open Reading Frame 9 2
  • Uncharacterized Protein KIAA0930 3
  • LSC3 3

External Ids for KIAA0930 Gene

Previous Symbols for KIAA0930 Gene

  • C22orf9

Summaries for KIAA0930 Gene

GeneCards Summary for KIAA0930 Gene

KIAA0930 (KIAA0930) is a Protein Coding gene.

Gene Wiki entry for KIAA0930 Gene

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KIAA0930 Gene

Genomics for KIAA0930 Gene

Genomic Location for KIAA0930 Gene

Start:
45,190,338 bp from pter
End:
45,240,769 bp from pter
Size:
50,432 bases
Orientation:
Minus strand

Genomic View for KIAA0930 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KIAA0930 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIAA0930 Gene

No data available for Regulatory Elements for KIAA0930 Gene

Proteins for KIAA0930 Gene

  • Protein details for KIAA0930 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ICG6-K0930_HUMAN
    Recommended name:
    Uncharacterized protein KIAA0930
    Protein Accession:
    Q6ICG6
    Secondary Accessions:
    • B0QY17
    • B0QY19
    • B3KT48
    • Q6ZVE5
    • Q7Z6K9
    • Q8IZ76
    • Q9Y2E2

    Protein attributes for KIAA0930 Gene

    Size:
    404 amino acids
    Molecular mass:
    45794 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for KIAA0930 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for KIAA0930 Gene

Proteomics data for KIAA0930 Gene at MOPED

Post-translational modifications for KIAA0930 Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys365

No data available for DME Specific Peptides for KIAA0930 Gene

Domains for KIAA0930 Gene

Protein Domains for KIAA0930 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with KIAA0930: view

No data available for Gene Families and UniProtKB/Swiss-Prot for KIAA0930 Gene

Function for KIAA0930 Gene

Molecular function for KIAA0930 Gene

GENATLAS Biochemistry: related to C elegans cos C16E9

miRNA for KIAA0930 Gene

miRTarBase miRNAs that target KIAA0930

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for KIAA0930 Gene

Localization for KIAA0930 Gene

No data available for Gene Ontology (GO) - Cellular Components for KIAA0930 Gene

Pathways for KIAA0930 Gene

SuperPathways for KIAA0930 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KIAA0930 Gene

None

No data available for Pathways by source for KIAA0930 Gene

Transcripts for KIAA0930 Gene

Unigene Clusters for KIAA0930 Gene

KIAA0930:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KIAA0930 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b · 7c ^ 8a · 8b · 8c ^ 9 ^ 10 ^ 11a · 11b ^ 12a · 12b ^ 13 ^ 14 ^ 15 ^ 16a · 16b · 16c ^ 17a · 17b ^
SP1: - - - - - - - - - -
SP2: - - - - - -
SP3: - - - - - - - - - - - - -
SP4: - - - - - -
SP5: - - - - - - - - - - -
SP6: - - - - - - - -
SP7: - - - - - - - -
SP8: -
SP9: -
SP10: - -
SP11: - - - - - - -
SP12:
SP13:
SP14:

ExUns: 18a · 18b ^ 19a · 19b · 19c
SP1: -
SP2: -
SP3: -
SP4: -
SP5:
SP6:
SP7:
SP8:
SP9: -
SP10: -
SP11:
SP12: -
SP13:
SP14:

Relevant External Links for KIAA0930 Gene

GeneLoc Exon Structure for
KIAA0930
ECgene alternative splicing isoforms for
KIAA0930

Expression for KIAA0930 Gene

mRNA expression in normal human tissues for KIAA0930 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for KIAA0930 Gene

SOURCE GeneReport for Unigene cluster for KIAA0930 Gene Hs.592207

genes like me logo Genes that share expressions with KIAA0930: view

Orthologs for KIAA0930 Gene

This gene was present in the common ancestor of animals.

Orthologs for KIAA0930 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia KIAA0930 36
  • 91.96 (n)
  • 90.3 (a)
cow
(Bos Taurus)
Mammalia KIAA0930 36
  • 91.91 (n)
  • 97.65 (a)
KIAA0930 37
  • 97 (a)
OneToOne
dog
(Canis familiaris)
Mammalia KIAA0930 36
  • 92.08 (n)
  • 97.52 (a)
KIAA0930 37
  • 93 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 5031439G07Rik 36
  • 89.83 (n)
  • 97.27 (a)
5031439G07Rik 16
5031439G07Rik 37
  • 83 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia KIAA0930 37
  • 65 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia KIAA0930 37
  • 86 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1304694 36
  • 90.65 (n)
  • 97.52 (a)
chicken
(Gallus gallus)
Aves KIAA0930 36
  • 80.18 (n)
  • 91.54 (a)
KIAA0930 37
  • 83 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia KIAA0930 37
  • 81 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia MGC53303 36
tropical clawed frog
(Silurana tropicalis)
Amphibia kiaa0930 36
  • 80.62 (n)
  • 88.97 (a)
zebrafish
(Danio rerio)
Actinopterygii zgc:172139 36
  • 82.05 (n)
  • 88.21 (a)
zgc:172139 37
  • 70 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG9646 37
  • 19 (a)
OneToOne
CG9646 38
  • 52 (a)
worm
(Caenorhabditis elegans)
Secernentea C16E9.2 37
  • 33 (a)
OneToOne
C16E9.2a 38
  • 37 (a)
Species with no ortholog for KIAA0930:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for KIAA0930 Gene

ENSEMBL:
Gene Tree for KIAA0930 (if available)
TreeFam:
Gene Tree for KIAA0930 (if available)

Paralogs for KIAA0930 Gene

Selected SIMAP similar genes for KIAA0930 Gene using alignment to 9 proteins:

genes like me logo Genes that share paralogs with KIAA0930: view

No data available for Paralogs for KIAA0930 Gene

Variants for KIAA0930 Gene

Sequence variations from dbSNP and Humsavar for KIAA0930 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs7456 -- 45,192,367(+) TGTGG(A/G)AGAGG utr-variant-3-prime
rs11678 -- 45,196,316(+) GCCCC(C/T)AGAAG utr-variant-3-prime
rs14958 -- 45,196,016(+) TCNAA(A/C)AAAAA utr-variant-3-prime
rs14959 -- 45,196,013(+) ACTTC(A/T)AANAA utr-variant-3-prime
rs133384 -- 45,203,766(+) GCCCC(-/C)ATGGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for KIAA0930 Gene

Variant ID Type Subtype PubMed ID
nsv834220 CNV Loss 17160897
dgv1411e1 CNV Complex 17122850
nsv9920 CNV Gain 18304495
nsv829278 CNV Loss 20364138
esv1008540 CNV Deletion 20482838
nsv829279 CNV Gain 20364138
esv2724391 CNV Deletion 23290073
esv2724392 CNV Deletion 23290073
esv2677451 CNV Deletion 23128226
esv2925 CNV Deletion 18987735
esv22242 CNV Gain 19812545
dgv787e201 CNV Deletion 23290073
esv5567 CNV Loss 19470904
esv2724394 CNV Deletion 23290073
esv1262903 CNV Deletion 17803354
nsv915294 CNV Loss 21882294

Relevant External Links for KIAA0930 Gene

HapMap Linkage Disequilibrium report
KIAA0930

Disorders for KIAA0930 Gene

No disorders were found for KIAA0930 Gene.

No data available for UniProtKB/Swiss-Prot for KIAA0930 Gene

Publications for KIAA0930 Gene

  1. Prediction of the coding sequences of unidentified human genes. XIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10231032) Nagase T. … Ohara O. (DNA Res. 1999) 2 3 4
  2. The DNA sequence of human chromosome 22. (PMID: 10591208) Dunham I. … Wright H. (Nature 1999) 3 4
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. A genome annotation-driven approach to cloning the human ORFeome. (PMID: 15461802) Collins J.E. … Dunham I. (Genome Biol. 2004) 3 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4

Products for KIAA0930 Gene

Sources for KIAA0930 Gene

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