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Aliases for KIAA0125 Gene

Subcategory (RNA class) for KIAA0125 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for KIAA0125 Gene

  • KIAA0125 2 3
  • Family With Sequence Similarity 30, Member A 2 3
  • C14orf110 3 4
  • FAM30A 3 4
  • Chromosome 14 Open Reading Frame 110 2
  • HSPC053 3

External Ids for KIAA0125 Gene

ORGUL Members for KIAA0125 Gene

Previous HGNC Symbols for KIAA0125 Gene

  • FAM30A
  • C14orf110

Previous GeneCards Identifiers for KIAA0125 Gene

  • GC15M018302
  • GC14P100319
  • GC14P104362
  • GC14P105461
  • GC14P106357
  • GC14P086516
  • GC14P106383

Summaries for KIAA0125 Gene

GeneCards Summary for KIAA0125 Gene

KIAA0125 (KIAA0125) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KIAA0125 Gene

Genomics for KIAA0125 Gene

Regulatory Elements for KIAA0125 Gene

Transcription factor binding sites by QIAGEN in the KIAA0125 gene promoter:

Genomic Location for KIAA0125 Gene

Start:
105,917,979 bp from pter
End:
105,932,642 bp from pter
Size:
14,664 bases
Orientation:
Plus strand

Genomic View for KIAA0125 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KIAA0125 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIAA0125 Gene

Proteins for KIAA0125 Gene

  • Protein details for KIAA0125 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NZY2-K0125_HUMAN
    Recommended name:
    Putative uncharacterized protein KIAA0125
    Protein Accession:
    Q9NZY2
    Secondary Accessions:
    • C9J8W9

    Protein attributes for KIAA0125 Gene

    Size:
    134 amino acids
    Molecular mass:
    14626 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAF29025.1; Type=Frameshift; Positions=6, 61, 72; Evidence={ECO:0000305};

neXtProt entry for KIAA0125 Gene

Proteomics data for KIAA0125 Gene at MOPED

Post-translational modifications for KIAA0125 Gene

No Post-translational modifications

Other Protein References for KIAA0125 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for KIAA0125 Gene

Domains for KIAA0125 Gene

Protein Domains for KIAA0125 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KIAA0125: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KIAA0125 Gene

Function for KIAA0125 Gene

Phenotypes for KIAA0125 Gene

genes like me logo Genes that share phenotypes with KIAA0125: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for KIAA0125 Gene

Localization for KIAA0125 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for KIAA0125 Gene COMPARTMENTS Subcellular localization image for KIAA0125 gene
Compartment Confidence
extracellular 2
cytosol 1
nucleus 1
plasma membrane 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for KIAA0125 Gene

Pathways for KIAA0125 Gene

SuperPathways for KIAA0125 Gene

No Data Available

Interacting Proteins for KIAA0125 Gene

Gene Ontology (GO) - Biological Process for KIAA0125 Gene

None

No data available for Pathways by source for KIAA0125 Gene

Transcripts for KIAA0125 Gene

mRNA/cDNA for KIAA0125 Gene

(35) Selected AceView cDNA sequences:
(7) Additional mRNA sequences :
(2) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KIAA0125 Gene

KIAA0125:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for KIAA0125

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for KIAA0125
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for KIAA0125 Gene

No ASD Table

Relevant External Links for KIAA0125 Gene

GeneLoc Exon Structure for
KIAA0125
ECgene alternative splicing isoforms for
KIAA0125

Expression for KIAA0125 Gene

mRNA expression in normal human tissues for KIAA0125 Gene

mRNA differential expression in normal tissues according to GTEx for KIAA0125 Gene

This gene is overexpressed in Spleen (9.1) and Small Intestine - Terminal Ileum (5.8).

SOURCE GeneReport for Unigene cluster for KIAA0125 Gene Hs.649259

genes like me logo Genes that share expressions with KIAA0125: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for KIAA0125 Gene

Orthologs for KIAA0125 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for KIAA0125 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia KIAA0125 36
  • 91 (a)
OneToOne
Species with no ortholog for KIAA0125:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for KIAA0125 Gene

ENSEMBL:
Gene Tree for KIAA0125 (if available)
TreeFam:
Gene Tree for KIAA0125 (if available)

Paralogs for KIAA0125 Gene

Selected SIMAP similar genes for KIAA0125 Gene using alignment to 1 proteins:

Pseudogenes.org Pseudogenes for KIAA0125 Gene

genes like me logo Genes that share paralogs with KIAA0125: view

No data available for Paralogs for KIAA0125 Gene

Variants for KIAA0125 Gene

Sequence variations from dbSNP and Humsavar for KIAA0125 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs1063158 -- 105,932,281(+) TCGCT(A/C)ACACT nc-transcript-variant
rs1808152 -- 105,919,055(-) GCCCC(G/T)GTCTC intron-variant
rs1811098 -- 105,926,062(-) TGAAC(C/T)CACGC nc-transcript-variant
rs1811099 -- 105,925,993(-) CTTTG(C/G)CACAG nc-transcript-variant
rs1811100 -- 105,925,889(-) AGGAG(C/T)AAGCT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for KIAA0125 Gene

Variant ID Type Subtype PubMed ID
nsv517055 CNV Gain+Loss 19592680
esv29981 CNV Gain 17803354
esv27023 CNV Gain+Loss 19812545
nsv817649 CNV Loss 17921354
esv32669 CNV Gain+Loss 17666407
dgv392n67 CNV Loss 20364138
nsv902594 CNV Gain 21882294
nsv456477 CNV Loss 19166990
nsv1443 CNV Loss 18451855
nsv902595 CNV Gain 21882294
dgv394n67 CNV Loss 20364138
nsv827099 CNV Loss 20364138
esv1002625 CNV Gain 20482838
nsv469723 CNV Complex 16826518
nsv471673 CNV Gain+Loss 15918152
nsv95 CNV Loss 15895083
dgv27n68 CNV Gain+Loss 17160897
nsv821677 CNV Gain 15273396
dgv422e199 CNV Deletion 23128226
nsv436184 CNV Deletion 17901297
nsv436179 CNV Deletion 17901297
dgv423e199 CNV Deletion 23128226
nsv827111 CNV Loss 20364138
nsv511534 CNV Gain 21212237
nsv827137 CNV Loss 20364138
nsv827138 CNV Loss 20364138
esv1001368 CNV Loss 20482838
nsv819133 CNV Gain 19587683
nsv827146 CNV Loss 20364138
nsv827147 CNV Loss 20364138
nsv827148 CNV Loss 20364138
nsv827149 CNV Loss 20364138
dgv404n67 CNV Gain 20364138
nsv902596 CNV Loss 21882294
nsv902597 CNV Gain 21882294
nsv514717 CNV Loss 21397061

Relevant External Links for KIAA0125 Gene

HapMap Linkage Disequilibrium report
KIAA0125

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for KIAA0125 Gene

Disorders for KIAA0125 Gene

No disorders were found for KIAA0125 Gene.

No data available for UniProtKB/Swiss-Prot for KIAA0125 Gene

Publications for KIAA0125 Gene

  1. Prediction of the coding sequences of unidentified human genes. IV. The coding sequences of 40 new genes (KIAA0121-KIAA0160) deduced by analysis of cDNA clones from human cell line KG-1. (PMID: 8590280) Nagase T. … Nomura N. (DNA Res. 1995) 2 3
  2. Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells. (PMID: 11042152) Zhang Q.-H. … Chen Z. (Genome Res. 2000) 3 4
  3. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for KIAA0125 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate KIAA0125
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for KIAA0125
    • Block miRNA regulation of KIAA0125 using miScript Target Protectors

    Sources for KIAA0125 Gene

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